RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-211ENST00000528840 EP400Q96L91 3159 aa16.61■□□□□ 0.25
PTP4A2-211ENST00000528840 CDK19Q9BWU1 502 aa16.61■□□□□ 0.25
PTP4A2-211ENST00000528840 PRDM11Q9NQV5 511 aa16.61■□□□□ 0.25
PTP4A2-211ENST00000528840 PLCH1Q4KWH8 1693 aa16.6■□□□□ 0.25
PTP4A2-211ENST00000528840 NWD2Q9ULI1 1742 aa16.6■□□□□ 0.25
PTP4A2-211ENST00000528840 BAG6P46379 1132 aa16.6■□□□□ 0.25
PTP4A2-211ENST00000528840 HRCP23327 699 aa16.59■□□□□ 0.25
PTP4A2-211ENST00000528840 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
PTP4A2-211ENST00000528840 SPATA31A5Q5VU36 1347 aa16.59■□□□□ 0.25
PTP4A2-211ENST00000528840 SPATA31A7Q8IWB4 1347 aa16.59■□□□□ 0.25
PTP4A2-211ENST00000528840 PSDA5PKW4 1024 aaPredicted RBP16.58■□□□□ 0.24
PTP4A2-211ENST00000528840 EN1Q05925 392 aaPredicted RBP16.58■□□□□ 0.24
PTP4A2-211ENST00000528840 CHRNA2Q15822 529 aa16.58■□□□□ 0.24
PTP4A2-211ENST00000528840 ADGRB2O60241 1585 aa16.57■□□□□ 0.24
PTP4A2-211ENST00000528840 ZC3H6P61129 1189 aaKnown RBP16.57■□□□□ 0.24
PTP4A2-211ENST00000528840 STRN4Q9NRL3 753 aa16.57■□□□□ 0.24
PTP4A2-211ENST00000528840 ABCA3Q99758 1704 aa16.56■□□□□ 0.24
PTP4A2-211ENST00000528840 TRPM3Q9HCF6 1732 aaPredicted RBP16.56■□□□□ 0.24
PTP4A2-211ENST00000528840 TULP4Q9NRJ4 1543 aa16.56■□□□□ 0.24
PTP4A2-211ENST00000528840 EVA1CP58658 441 aa16.56■□□□□ 0.24
PTP4A2-211ENST00000528840 NBPF8Q3BBV2 869 aa16.56■□□□□ 0.24
PTP4A2-211ENST00000528840 SRCAPQ6ZRS2 3230 aa16.56■□□□□ 0.24
PTP4A2-211ENST00000528840 CCDC61Q9Y6R9 512 aa16.55■□□□□ 0.24
PTP4A2-211ENST00000528840 KIAA0232Q92628 1395 aa16.54■□□□□ 0.24
PTP4A2-211ENST00000528840 ACEP12821 1306 aa16.54■□□□□ 0.24
PTP4A2-211ENST00000528840 USP35Q9P2H5 1018 aa16.54■□□□□ 0.24
PTP4A2-211ENST00000528840 COL14A1Q05707 1796 aaKnown RBP16.54■□□□□ 0.24
PTP4A2-211ENST00000528840 ALS2Q96Q42 1657 aa16.53■□□□□ 0.24
PTP4A2-211ENST00000528840 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
PTP4A2-211ENST00000528840 ABTB2Q8N961 1025 aa16.53■□□□□ 0.24
PTP4A2-211ENST00000528840 SPATA31A1Q5TZJ5 1347 aa16.52■□□□□ 0.24
PTP4A2-211ENST00000528840 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.24
PTP4A2-211ENST00000528840 NRAPQ86VF7 1730 aa16.52■□□□□ 0.24
PTP4A2-211ENST00000528840 PLEKHG3A1L390 1219 aa16.51■□□□□ 0.23
PTP4A2-211ENST00000528840 TRIM37O94972 964 aa16.51■□□□□ 0.23
PTP4A2-211ENST00000528840 R3HDM1Q15032 1099 aaKnown RBP16.5■□□□□ 0.23
PTP4A2-211ENST00000528840 EZH2Q15910 746 aaKnown RBP16.5■□□□□ 0.23
PTP4A2-211ENST00000528840 FAM196AQ6ZSG2 479 aa16.5■□□□□ 0.23
PTP4A2-211ENST00000528840 SRPK2P78362 688 aaKnown RBP16.49■□□□□ 0.23
PTP4A2-211ENST00000528840 ATP7BP35670 1465 aa16.48■□□□□ 0.23
PTP4A2-211ENST00000528840 APBA3O96018 575 aa16.48■□□□□ 0.23
PTP4A2-211ENST00000528840 PDE3BQ13370 1112 aa16.48■□□□□ 0.23
PTP4A2-211ENST00000528840 LARP1Q6PKG0 1096 aaKnown RBP16.47■□□□□ 0.23
PTP4A2-211ENST00000528840 CABP2Q9NPB3 220 aa16.47■□□□□ 0.23
PTP4A2-211ENST00000528840 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
PTP4A2-211ENST00000528840 NLRP13Q86W25 1043 aa16.46■□□□□ 0.23
PTP4A2-211ENST00000528840 CAMKK2Q96RR4 588 aa16.46■□□□□ 0.23
PTP4A2-211ENST00000528840 ARHGEF28Q8N1W1 1705 aaKnown RBP16.45■□□□□ 0.22
PTP4A2-211ENST00000528840 GCP02774 474 aa16.45■□□□□ 0.22
PTP4A2-211ENST00000528840 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
PTP4A2-211ENST00000528840 BARGINQ6ZT62 677 aa16.45■□□□□ 0.22
PTP4A2-211ENST00000528840 ZBTB7CA1YPR0 619 aa16.44■□□□□ 0.22
PTP4A2-211ENST00000528840 TCP11L2Q8N4U5 519 aa16.44■□□□□ 0.22
PTP4A2-211ENST00000528840 CRYBG1Q9Y4K1 1723 aa16.44■□□□□ 0.22
PTP4A2-211ENST00000528840 ITSN1Q15811 1721 aa16.43■□□□□ 0.22
PTP4A2-211ENST00000528840 CABP1Q9NZU7 370 aa16.43■□□□□ 0.22
PTP4A2-211ENST00000528840 CENPJQ9HC77 1338 aaPredicted RBP16.43■□□□□ 0.22
PTP4A2-211ENST00000528840 THSD7AQ9UPZ6 1657 aa16.42■□□□□ 0.22
PTP4A2-211ENST00000528840 NLRP6P59044 892 aa16.41■□□□□ 0.22
PTP4A2-211ENST00000528840 SSH2Q76I76 1423 aa16.41■□□□□ 0.22
PTP4A2-211ENST00000528840 RGPD1P0DJD0 1748 aa16.41■□□□□ 0.22
PTP4A2-211ENST00000528840 CAMTA1Q9Y6Y1 1673 aa16.4■□□□□ 0.22
PTP4A2-211ENST00000528840 PPIP5K1Q6PFW1 1433 aa16.4■□□□□ 0.22
PTP4A2-211ENST00000528840 THRAP3Q9Y2W1 955 aaKnown RBP16.4■□□□□ 0.22
PTP4A2-211ENST00000528840 CPDO75976 1380 aa16.39■□□□□ 0.21
PTP4A2-211ENST00000528840 DISP2A7MBM2 1401 aa16.39■□□□□ 0.21
PTP4A2-211ENST00000528840 PHRF1Q9P1Y6 1649 aaKnown RBP16.39■□□□□ 0.21
PTP4A2-211ENST00000528840 USP19O94966 1318 aa16.39■□□□□ 0.21
PTP4A2-211ENST00000528840 NBPF14Q5TI25 921 aa16.38■□□□□ 0.21
PTP4A2-211ENST00000528840 L3MBTL2Q969R5 705 aa16.38■□□□□ 0.21
PTP4A2-211ENST00000528840 LRP5O75197 1615 aa16.37■□□□□ 0.21
PTP4A2-211ENST00000528840 KIAA1210Q9ULL0 1709 aa16.36■□□□□ 0.21
PTP4A2-211ENST00000528840 TOM1L2Q6ZVM7 507 aa16.35■□□□□ 0.21
PTP4A2-211ENST00000528840 SIN3AQ96ST3 1273 aa16.35■□□□□ 0.21
PTP4A2-211ENST00000528840 TOPAZ1Q8N9V7 1692 aa16.34■□□□□ 0.21
PTP4A2-211ENST00000528840 TNS1Q9HBL0 1735 aaKnown RBP16.34■□□□□ 0.21
PTP4A2-211ENST00000528840 NEUROD1Q13562 356 aa16.34■□□□□ 0.21
PTP4A2-211ENST00000528840 EVC2Q86UK5 1308 aa16.34■□□□□ 0.21
PTP4A2-211ENST00000528840 BRD4O60885 1362 aaPredicted RBP16.34■□□□□ 0.21
PTP4A2-211ENST00000528840 PARD3Q8TEW0 1356 aa16.34■□□□□ 0.21
PTP4A2-211ENST00000528840 AXIN2Q9Y2T1 843 aa16.33■□□□□ 0.2
PTP4A2-211ENST00000528840 NRKQ7Z2Y5 1582 aa16.33■□□□□ 0.2
PTP4A2-211ENST00000528840 C11orf95C9JLR9 678 aaPredicted RBP16.32■□□□□ 0.2
PTP4A2-211ENST00000528840 SOX12O15370 315 aa16.32■□□□□ 0.2
PTP4A2-211ENST00000528840 DDB1Q16531 1140 aa16.32■□□□□ 0.2
PTP4A2-211ENST00000528840 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
PTP4A2-211ENST00000528840 COL5A2P05997 1499 aaPredicted RBP16.31■□□□□ 0.2
PTP4A2-211ENST00000528840 USP6P35125 1406 aa16.31■□□□□ 0.2
PTP4A2-211ENST00000528840 CRB1P82279 1406 aa16.31■□□□□ 0.2
PTP4A2-211ENST00000528840 AATKQ6ZMQ8 1374 aa16.31■□□□□ 0.2
PTP4A2-211ENST00000528840 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
PTP4A2-211ENST00000528840 TTC21BQ7Z4L5 1316 aa16.29■□□□□ 0.2
PTP4A2-211ENST00000528840 CSB-PGBD3P0DP91 1061 aa16.28■□□□□ 0.2
PTP4A2-211ENST00000528840 PTF1AQ7RTS3 328 aa16.28■□□□□ 0.2
PTP4A2-211ENST00000528840 ARHGEF25Q86VW2 580 aa16.28■□□□□ 0.2
PTP4A2-211ENST00000528840 KCNH5Q8NCM2 988 aa16.28■□□□□ 0.2
PTP4A2-211ENST00000528840 PLSCR1O15162 318 aa16.27■□□□□ 0.2
PTP4A2-211ENST00000528840 KCNQ2O43526 872 aa16.27■□□□□ 0.2
PTP4A2-211ENST00000528840 BCL11BQ9C0K0 894 aaPredicted RBP16.27■□□□□ 0.2
PTP4A2-211ENST00000528840 SPON1Q9HCB6 807 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms