RNA–Protein interactions for RNA: ENST00000528496.1

AP003063.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003063.1, Length 855 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003063.1-201ENST00000528496 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
AP003063.1-201ENST00000528496 AMOTL2Q9Y2J4 779 aa12.38□□□□□ -0.43
AP003063.1-201ENST00000528496 RPGRIP1LQ68CZ1 1315 aa12.37□□□□□ -0.43
AP003063.1-201ENST00000528496 BLMP54132 1417 aaPredicted RBP12.37□□□□□ -0.43
AP003063.1-201ENST00000528496 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
AP003063.1-201ENST00000528496 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
AP003063.1-201ENST00000528496 STAC3Q96MF2 364 aa12.37□□□□□ -0.43
AP003063.1-201ENST00000528496 NRXN3Q9Y4C0 1643 aa12.37□□□□□ -0.43
AP003063.1-201ENST00000528496 B4GALNT3Q6L9W6 998 aa12.36□□□□□ -0.43
AP003063.1-201ENST00000528496 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
AP003063.1-201ENST00000528496 PTPRUQ92729 1446 aa12.35□□□□□ -0.43
AP003063.1-201ENST00000528496 ATF3P18847 181 aa12.34□□□□□ -0.43
AP003063.1-201ENST00000528496 C19orf44Q9H6X5 657 aa12.34□□□□□ -0.43
AP003063.1-201ENST00000528496 SLAIN2Q9P270 581 aa12.34□□□□□ -0.43
AP003063.1-201ENST00000528496 ROBO1Q9Y6N7 1651 aa12.34□□□□□ -0.43
AP003063.1-201ENST00000528496 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
AP003063.1-201ENST00000528496 XRN1Q8IZH2 1706 aaKnown RBP12.34□□□□□ -0.43
AP003063.1-201ENST00000528496 METP08581 1390 aa12.33□□□□□ -0.44
AP003063.1-201ENST00000528496 CADPS2Q86UW7 1296 aa12.33□□□□□ -0.44
AP003063.1-201ENST00000528496 IFT172Q9UG01 1749 aa12.32□□□□□ -0.44
AP003063.1-201ENST00000528496 PER1O15534 1290 aaPredicted RBP12.32□□□□□ -0.44
AP003063.1-201ENST00000528496 CD44P16070 742 aaKnown RBP12.32□□□□□ -0.44
AP003063.1-201ENST00000528496 TMF1P82094 1093 aa12.32□□□□□ -0.44
AP003063.1-201ENST00000528496 POTEGQ6S5H5 508 aa12.32□□□□□ -0.44
AP003063.1-201ENST00000528496 CCDC136Q96JN2 1154 aa12.32□□□□□ -0.44
AP003063.1-201ENST00000528496 TESK2Q96S53 571 aa12.32□□□□□ -0.44
AP003063.1-201ENST00000528496 PPLO60437 1756 aa12.32□□□□□ -0.44
AP003063.1-201ENST00000528496 MYOM1P52179 1685 aa12.32□□□□□ -0.44
AP003063.1-201ENST00000528496 RGL3Q3MIN7 710 aa12.31□□□□□ -0.44
AP003063.1-201ENST00000528496 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.31□□□□□ -0.44
AP003063.1-201ENST00000528496 RRP1P56182 461 aaKnown RBP12.3□□□□□ -0.44
AP003063.1-201ENST00000528496 ILDR2Q71H61 639 aa12.3□□□□□ -0.44
AP003063.1-201ENST00000528496 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
AP003063.1-201ENST00000528496 DCCP43146 1447 aa12.29□□□□□ -0.44
AP003063.1-201ENST00000528496 MYOM2P54296 1465 aa12.29□□□□□ -0.44
AP003063.1-201ENST00000528496 NBPF1Q3BBV0 1214 aa12.29□□□□□ -0.44
AP003063.1-201ENST00000528496 CDCA8Q53HL2 280 aa12.28□□□□□ -0.44
AP003063.1-201ENST00000528496 ZRANB1Q9UGI0 708 aa12.28□□□□□ -0.44
AP003063.1-201ENST00000528496 NPC1L1Q9UHC9 1359 aa12.28□□□□□ -0.44
AP003063.1-201ENST00000528496 PHLPP1O60346 1717 aa12.28□□□□□ -0.44
AP003063.1-201ENST00000528496 PYGBP11216 843 aa12.27□□□□□ -0.45
AP003063.1-201ENST00000528496 RCAN3Q9UKA8 241 aa12.27□□□□□ -0.45
AP003063.1-201ENST00000528496 SETD1AO15047 1707 aaKnown RBP12.27□□□□□ -0.45
AP003063.1-201ENST00000528496 EIF3AQ14152 1382 aaKnown RBP12.27□□□□□ -0.45
AP003063.1-201ENST00000528496 PTCH1Q13635 1447 aa12.27□□□□□ -0.45
AP003063.1-201ENST00000528496 ADGRL3Q9HAR2 1447 aa12.27□□□□□ -0.45
AP003063.1-201ENST00000528496 ASXL1Q8IXJ9 1541 aa12.27□□□□□ -0.45
AP003063.1-201ENST00000528496 ADGRF5Q8IZF2 1346 aa12.26□□□□□ -0.45
AP003063.1-201ENST00000528496 PIK3C2GO75747 1445 aa12.26□□□□□ -0.45
AP003063.1-201ENST00000528496 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
AP003063.1-201ENST00000528496 CNGB1Q14028 1251 aaPredicted RBP12.24□□□□□ -0.45
AP003063.1-201ENST00000528496 NALCNQ8IZF0 1738 aa12.24□□□□□ -0.45
AP003063.1-201ENST00000528496 ROBO2Q9HCK4 1378 aa12.24□□□□□ -0.45
AP003063.1-201ENST00000528496 JCADQ9P266 1359 aa12.24□□□□□ -0.45
AP003063.1-201ENST00000528496 AHDC1Q5TGY3 1603 aaPredicted RBP12.23□□□□□ -0.45
AP003063.1-201ENST00000528496 MST1RQ04912 1400 aa12.23□□□□□ -0.45
AP003063.1-201ENST00000528496 SOCS7O14512 581 aa12.23□□□□□ -0.45
AP003063.1-201ENST00000528496 TCERG1O14776 1098 aaKnown RBP12.23□□□□□ -0.45
AP003063.1-201ENST00000528496 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
AP003063.1-201ENST00000528496 PANK3Q9H999 370 aa12.23□□□□□ -0.45
AP003063.1-201ENST00000528496 COL16A1Q07092 1604 aaPredicted RBP12.22□□□□□ -0.45
AP003063.1-201ENST00000528496 ANP32AP39687 249 aaKnown RBP12.22□□□□□ -0.45
AP003063.1-201ENST00000528496 NOP58Q9Y2X3 529 aaKnown RBP12.22□□□□□ -0.45
AP003063.1-201ENST00000528496 MS4A1P11836 297 aa12.21□□□□□ -0.45
AP003063.1-201ENST00000528496 STK26Q9P289 416 aa12.21□□□□□ -0.45
AP003063.1-201ENST00000528496 NRXN1Q9ULB1 1477 aa12.2□□□□□ -0.46
AP003063.1-201ENST00000528496 RGL2O15211 777 aa12.19□□□□□ -0.46
AP003063.1-201ENST00000528496 CC2D1BQ5T0F9 858 aaKnown RBP12.19□□□□□ -0.46
AP003063.1-201ENST00000528496 TMEM132EQ6IEE7 984 aa12.19□□□□□ -0.46
AP003063.1-201ENST00000528496 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
AP003063.1-201ENST00000528496 CCDC61Q9Y6R9 512 aa12.19□□□□□ -0.46
AP003063.1-201ENST00000528496 TECPR2O15040 1411 aa12.19□□□□□ -0.46
AP003063.1-201ENST00000528496 ABCC11Q96J66 1382 aa12.18□□□□□ -0.46
AP003063.1-201ENST00000528496 SPATA31A6Q5VVP1 1343 aa12.18□□□□□ -0.46
AP003063.1-201ENST00000528496 C14orf93Q9H972 538 aaKnown RBP12.18□□□□□ -0.46
AP003063.1-201ENST00000528496 KNSTRNQ9Y448 316 aa12.18□□□□□ -0.46
AP003063.1-201ENST00000528496 C1orf167Q5SNV9 1468 aa12.18□□□□□ -0.46
AP003063.1-201ENST00000528496 YTHDC2Q9H6S0 1430 aaKnown RBP12.18□□□□□ -0.46
AP003063.1-201ENST00000528496 NHSL1Q5SYE7 1610 aa12.18□□□□□ -0.46
AP003063.1-201ENST00000528496 USP32Q8NFA0 1604 aa12.18□□□□□ -0.46
AP003063.1-201ENST00000528496 SBNO2Q9Y2G9 1366 aa12.18□□□□□ -0.46
AP003063.1-201ENST00000528496 KNDC1Q76NI1 1749 aa12.17□□□□□ -0.46
AP003063.1-201ENST00000528496 SHPRHQ149N8 1683 aa12.17□□□□□ -0.46
AP003063.1-201ENST00000528496 EXOC6Q8TAG9 804 aa12.17□□□□□ -0.46
AP003063.1-201ENST00000528496 IPO9Q96P70 1041 aaKnown RBP12.17□□□□□ -0.46
AP003063.1-201ENST00000528496 PPP2R1AP30153 589 aa12.16□□□□□ -0.46
AP003063.1-201ENST00000528496 CFAP70Q5T0N1 1121 aa12.16□□□□□ -0.46
AP003063.1-201ENST00000528496 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
AP003063.1-201ENST00000528496 NGEFQ8N5V2 710 aa12.16□□□□□ -0.46
AP003063.1-201ENST00000528496 LRRC59Q96AG4 307 aaKnown RBP12.16□□□□□ -0.46
AP003063.1-201ENST00000528496 CDC42BPGQ6DT37 1551 aa12.16□□□□□ -0.46
AP003063.1-201ENST00000528496 CHRM1P11229 460 aaPredicted RBP12.15□□□□□ -0.46
AP003063.1-201ENST00000528496 WDR43Q15061 677 aaKnown RBP eCLIP12.15□□□□□ -0.46
AP003063.1-201ENST00000528496 WAPLQ7Z5K2 1190 aa12.15□□□□□ -0.46
AP003063.1-201ENST00000528496 PHF12Q96QT6 1004 aa12.15□□□□□ -0.46
AP003063.1-201ENST00000528496 RGS17Q9UGC6 210 aaPredicted RBP12.15□□□□□ -0.46
AP003063.1-201ENST00000528496 QRICH2Q9H0J4 1663 aa12.14□□□□□ -0.47
AP003063.1-201ENST00000528496 SIRT1Q96EB6 747 aa12.14□□□□□ -0.47
AP003063.1-201ENST00000528496 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
AP003063.1-201ENST00000528496 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms