RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 TRPM3Q9HCF6 1732 aaPredicted RBP18.24■□□□□ 0.51
SRPRA-202ENST00000527817 FAM196AQ6ZSG2 479 aa18.24■□□□□ 0.51
SRPRA-202ENST00000527817 HIRIP3Q9BW71 556 aaPredicted RBP18.24■□□□□ 0.51
SRPRA-202ENST00000527817 EIF3AQ14152 1382 aaKnown RBP18.24■□□□□ 0.51
SRPRA-202ENST00000527817 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
SRPRA-202ENST00000527817 RGPD1P0DJD0 1748 aa18.23■□□□□ 0.51
SRPRA-202ENST00000527817 ALS2Q96Q42 1657 aa18.23■□□□□ 0.51
SRPRA-202ENST00000527817 WASLO00401 505 aaPredicted RBP18.23■□□□□ 0.51
SRPRA-202ENST00000527817 NGDNQ8NEJ9 315 aaKnown RBP18.23■□□□□ 0.51
SRPRA-202ENST00000527817 PRDM11Q9NQV5 511 aa18.23■□□□□ 0.51
SRPRA-202ENST00000527817 TRAK1Q9UPV9 953 aa18.23■□□□□ 0.51
SRPRA-202ENST00000527817 ADGRB2O60241 1585 aa18.22■□□□□ 0.51
SRPRA-202ENST00000527817 SPATA31A1Q5TZJ5 1347 aa18.22■□□□□ 0.51
SRPRA-202ENST00000527817 MINK1Q8N4C8 1332 aaPredicted RBP18.22■□□□□ 0.51
SRPRA-202ENST00000527817 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
SRPRA-202ENST00000527817 TRIM37O94972 964 aa18.21■□□□□ 0.51
SRPRA-202ENST00000527817 THSD7AQ9UPZ6 1657 aa18.2■□□□□ 0.5
SRPRA-202ENST00000527817 APBA3O96018 575 aa18.18■□□□□ 0.5
SRPRA-202ENST00000527817 TULP4Q9NRJ4 1543 aa18.18■□□□□ 0.5
SRPRA-202ENST00000527817 PARD3Q8TEW0 1356 aa18.17■□□□□ 0.5
SRPRA-202ENST00000527817 ADGRB1O14514 1584 aa18.17■□□□□ 0.5
SRPRA-202ENST00000527817 STAC3Q96MF2 364 aa18.17■□□□□ 0.5
SRPRA-202ENST00000527817 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
SRPRA-202ENST00000527817 TNS1Q9HBL0 1735 aaKnown RBP18.16■□□□□ 0.5
SRPRA-202ENST00000527817 CHRNA2Q15822 529 aa18.16■□□□□ 0.5
SRPRA-202ENST00000527817 BARGINQ6ZT62 677 aa18.15■□□□□ 0.5
SRPRA-202ENST00000527817 NUDT16Q96DE0 195 aaKnown RBP18.15■□□□□ 0.5
SRPRA-202ENST00000527817 STRN4Q9NRL3 753 aa18.15■□□□□ 0.5
SRPRA-202ENST00000527817 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
SRPRA-202ENST00000527817 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
SRPRA-202ENST00000527817 PDE3BQ13370 1112 aa18.14■□□□□ 0.49
SRPRA-202ENST00000527817 EVA1CP58658 441 aa18.13■□□□□ 0.49
SRPRA-202ENST00000527817 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
SRPRA-202ENST00000527817 NBPF14Q5TI25 921 aa18.13■□□□□ 0.49
SRPRA-202ENST00000527817 KDM2AQ9Y2K7 1162 aa18.13■□□□□ 0.49
SRPRA-202ENST00000527817 DCAF11Q8TEB1 546 aa18.12■□□□□ 0.49
SRPRA-202ENST00000527817 YY1P25490 414 aa18.1■□□□□ 0.49
SRPRA-202ENST00000527817 USP35Q9P2H5 1018 aa18.1■□□□□ 0.49
SRPRA-202ENST00000527817 NUTM2GQ5VZR2 741 aa18.09■□□□□ 0.49
SRPRA-202ENST00000527817 TCP11L2Q8N4U5 519 aa18.09■□□□□ 0.49
SRPRA-202ENST00000527817 CDK19Q9BWU1 502 aa18.09■□□□□ 0.49
SRPRA-202ENST00000527817 THRAP3Q9Y2W1 955 aaKnown RBP18.09■□□□□ 0.49
SRPRA-202ENST00000527817 ATP7BP35670 1465 aa18.08■□□□□ 0.49
SRPRA-202ENST00000527817 PLEKHG3A1L390 1219 aa18.08■□□□□ 0.48
SRPRA-202ENST00000527817 C11orf95C9JLR9 678 aaPredicted RBP18.08■□□□□ 0.48
SRPRA-202ENST00000527817 LARP1Q6PKG0 1096 aaKnown RBP18.08■□□□□ 0.48
SRPRA-202ENST00000527817 SSH2Q76I76 1423 aa18.07■□□□□ 0.48
SRPRA-202ENST00000527817 POLR3AO14802 1390 aaPredicted RBP18.07■□□□□ 0.48
SRPRA-202ENST00000527817 ACEP12821 1306 aa18.07■□□□□ 0.48
SRPRA-202ENST00000527817 SPON1Q9HCB6 807 aa18.07■□□□□ 0.48
SRPRA-202ENST00000527817 CCDC61Q9Y6R9 512 aa18.07■□□□□ 0.48
SRPRA-202ENST00000527817 KCNQ2O43526 872 aa18.06■□□□□ 0.48
SRPRA-202ENST00000527817 ABTB2Q8N961 1025 aa18.06■□□□□ 0.48
SRPRA-202ENST00000527817 CPDO75976 1380 aa18.05■□□□□ 0.48
SRPRA-202ENST00000527817 RREB1Q92766 1687 aa18.04■□□□□ 0.48
SRPRA-202ENST00000527817 CAMTA1Q9Y6Y1 1673 aa18.04■□□□□ 0.48
SRPRA-202ENST00000527817 PHRF1Q9P1Y6 1649 aaKnown RBP18.04■□□□□ 0.48
SRPRA-202ENST00000527817 ITSN1Q15811 1721 aa18.03■□□□□ 0.48
SRPRA-202ENST00000527817 DCAF8L1A6NGE4 600 aa18.03■□□□□ 0.48
SRPRA-202ENST00000527817 PPP1R1BQ9UD71 204 aaPredicted RBP18.03■□□□□ 0.48
SRPRA-202ENST00000527817 PLSCR1O15162 318 aa18.02■□□□□ 0.48
SRPRA-202ENST00000527817 GCP02774 474 aa18.02■□□□□ 0.48
SRPRA-202ENST00000527817 NLRP13Q86W25 1043 aa18.02■□□□□ 0.48
SRPRA-202ENST00000527817 USP19O94966 1318 aa18.01■□□□□ 0.47
SRPRA-202ENST00000527817 RAB3GAP2Q9H2M9 1393 aa18.01■□□□□ 0.47
SRPRA-202ENST00000527817 NUP188Q5SRE5 1749 aa18.01■□□□□ 0.47
SRPRA-202ENST00000527817 NINLQ9Y2I6 1382 aa18■□□□□ 0.47
SRPRA-202ENST00000527817 ARHGEF28Q8N1W1 1705 aaKnown RBP17.98■□□□□ 0.47
SRPRA-202ENST00000527817 LMO7Q8WWI1 1683 aa17.98■□□□□ 0.47
SRPRA-202ENST00000527817 NRKQ7Z2Y5 1582 aa17.96■□□□□ 0.47
SRPRA-202ENST00000527817 BRD4O60885 1362 aaPredicted RBP17.96■□□□□ 0.47
SRPRA-202ENST00000527817 BCL11BQ9C0K0 894 aaPredicted RBP17.95■□□□□ 0.46
SRPRA-202ENST00000527817 CRB1P82279 1406 aa17.95■□□□□ 0.46
SRPRA-202ENST00000527817 PARP4Q9UKK3 1724 aaKnown RBP17.95■□□□□ 0.46
SRPRA-202ENST00000527817 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
SRPRA-202ENST00000527817 DDB1Q16531 1140 aa17.94■□□□□ 0.46
SRPRA-202ENST00000527817 OVOS2A0A0G2JMS6 1433 aa17.94■□□□□ 0.46
SRPRA-202ENST00000527817 OVOS2A0A0J9YW53 1432 aa17.94■□□□□ 0.46
SRPRA-202ENST00000527817 OVOS2Q6IE36 1432 aa17.94■□□□□ 0.46
SRPRA-202ENST00000527817 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
SRPRA-202ENST00000527817 AATKQ6ZMQ8 1374 aa17.93■□□□□ 0.46
SRPRA-202ENST00000527817 PROM2Q8N271 834 aa17.92■□□□□ 0.46
SRPRA-202ENST00000527817 NLRP6P59044 892 aa17.91■□□□□ 0.46
SRPRA-202ENST00000527817 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
SRPRA-202ENST00000527817 ANO8Q9HCE9 1232 aaPredicted RBP17.91■□□□□ 0.46
SRPRA-202ENST00000527817 PEAK1Q9H792 1746 aa17.9■□□□□ 0.46
SRPRA-202ENST00000527817 TOM1L2Q6ZVM7 507 aa17.9■□□□□ 0.46
SRPRA-202ENST00000527817 CDCA7Q9BWT1 371 aaPredicted RBP17.9■□□□□ 0.46
SRPRA-202ENST00000527817 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.46
SRPRA-202ENST00000527817 SBF2Q86WG5 1849 aa17.89■□□□□ 0.45
SRPRA-202ENST00000527817 NBPF1Q3BBV0 1214 aa17.89■□□□□ 0.45
SRPRA-202ENST00000527817 PTF1AQ7RTS3 328 aa17.89■□□□□ 0.45
SRPRA-202ENST00000527817 MARCH10Q8NA82 808 aaPredicted RBP17.89■□□□□ 0.45
SRPRA-202ENST00000527817 CABP2Q9NPB3 220 aa17.89■□□□□ 0.45
SRPRA-202ENST00000527817 RGPD3A6NKT7 1758 aaPredicted RBP17.89■□□□□ 0.45
SRPRA-202ENST00000527817 RGPD4Q7Z3J3 1758 aa17.89■□□□□ 0.45
SRPRA-202ENST00000527817 BCL9O00512 1426 aa17.89■□□□□ 0.45
SRPRA-202ENST00000527817 ZBTB7CA1YPR0 619 aa17.88■□□□□ 0.45
SRPRA-202ENST00000527817 PDGFDQ9GZP0 370 aaPredicted RBP17.88■□□□□ 0.45
SRPRA-202ENST00000527817 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms