RNA–Protein interactions for RNA: ENST00000527656.1

LRP4-202, Transcript of LDL receptor related protein 4, humanhuman

TSL 2

Gene LRP4, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-202ENST00000527656 RBM6P78332 1123 aaKnown RBP22.37■■□□□ 1.17
LRP4-202ENST00000527656 COL14A1Q05707 1796 aaKnown RBP22.36■■□□□ 1.17
LRP4-202ENST00000527656 LMOD2Q6P5Q4 547 aa22.36■■□□□ 1.17
LRP4-202ENST00000527656 PPIP5K1Q6PFW1 1433 aa22.35■■□□□ 1.17
LRP4-202ENST00000527656 NGDNQ8NEJ9 315 aaKnown RBP22.35■■□□□ 1.17
LRP4-202ENST00000527656 NRKQ7Z2Y5 1582 aa22.34■■□□□ 1.17
LRP4-202ENST00000527656 CABP2Q9NPB3 220 aa22.34■■□□□ 1.17
LRP4-202ENST00000527656 TRPC5Q9UL62 973 aaPredicted RBP22.34■■□□□ 1.17
LRP4-202ENST00000527656 ACEP12821 1306 aa22.33■■□□□ 1.17
LRP4-202ENST00000527656 TONSLQ96HA7 1378 aa22.33■■□□□ 1.17
LRP4-202ENST00000527656 CCDC61Q9Y6R9 512 aa22.32■■□□□ 1.16
LRP4-202ENST00000527656 PIK3C2AO00443 1686 aa22.31■■□□□ 1.16
LRP4-202ENST00000527656 PLEKHG3A1L390 1219 aa22.31■■□□□ 1.16
LRP4-202ENST00000527656 SRPK2P78362 688 aaKnown RBP22.3■■□□□ 1.16
LRP4-202ENST00000527656 MON2Q7Z3U7 1717 aa22.28■■□□□ 1.16
LRP4-202ENST00000527656 PAK3O75914 559 aaPredicted RBP22.28■■□□□ 1.16
LRP4-202ENST00000527656 UNC5CLQ8IV45 518 aa22.28■■□□□ 1.16
LRP4-202ENST00000527656 UPF1Q92900 1129 aaKnown RBP eCLIP22.28■■□□□ 1.16
LRP4-202ENST00000527656 FAM83GA6ND36 823 aa22.27■■□□□ 1.16
LRP4-202ENST00000527656 HAP1P54257 671 aaPredicted RBP22.27■■□□□ 1.16
LRP4-202ENST00000527656 USP6P35125 1406 aa22.25■■□□□ 1.15
LRP4-202ENST00000527656 GJD4Q96KN9 370 aaPredicted RBP22.25■■□□□ 1.15
LRP4-202ENST00000527656 LMO7Q8WWI1 1683 aa22.25■■□□□ 1.15
LRP4-202ENST00000527656 SBNO2Q9Y2G9 1366 aa22.25■■□□□ 1.15
LRP4-202ENST00000527656 NUTM2GQ5VZR2 741 aa22.24■■□□□ 1.15
LRP4-202ENST00000527656 SSH2Q76I76 1423 aa22.23■■□□□ 1.15
LRP4-202ENST00000527656 CARD11Q9BXL7 1154 aa22.22■■□□□ 1.15
LRP4-202ENST00000527656 CABP1Q9NZU7 370 aa22.22■■□□□ 1.15
LRP4-202ENST00000527656 EVC2Q86UK5 1308 aa22.22■■□□□ 1.15
LRP4-202ENST00000527656 KIAA0232Q92628 1395 aa22.21■■□□□ 1.15
LRP4-202ENST00000527656 SLIT3O75094 1523 aa22.21■■□□□ 1.15
LRP4-202ENST00000527656 USP19O94966 1318 aa22.2■■□□□ 1.14
LRP4-202ENST00000527656 THSD7AQ9UPZ6 1657 aa22.2■■□□□ 1.14
LRP4-202ENST00000527656 VPS72Q15906 364 aa22.19■■□□□ 1.14
LRP4-202ENST00000527656 CD163L1Q9NR16 1453 aa22.19■■□□□ 1.14
LRP4-202ENST00000527656 BTG4Q9NY30 223 aa22.18■■□□□ 1.14
LRP4-202ENST00000527656 COL18A1P39060 1754 aa22.17■■□□□ 1.14
LRP4-202ENST00000527656 RGPD5Q99666 1765 aa22.17■■□□□ 1.14
LRP4-202ENST00000527656 USP54Q70EL1 1684 aa22.17■■□□□ 1.14
LRP4-202ENST00000527656 CPSF1Q10570 1443 aaKnown RBP22.16■■□□□ 1.14
LRP4-202ENST00000527656 CAMTA1Q9Y6Y1 1673 aa22.16■■□□□ 1.14
LRP4-202ENST00000527656 ATAD2Q6PL18 1390 aa22.15■■□□□ 1.14
LRP4-202ENST00000527656 CHRNA2Q15822 529 aa22.15■■□□□ 1.14
LRP4-202ENST00000527656 ABTB2Q8N961 1025 aa22.15■■□□□ 1.14
LRP4-202ENST00000527656 PRDM11Q9NQV5 511 aa22.14■■□□□ 1.13
LRP4-202ENST00000527656 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
LRP4-202ENST00000527656 ZC3H6P61129 1189 aaKnown RBP22.13■■□□□ 1.13
LRP4-202ENST00000527656 PCGF6Q9BYE7 350 aa22.13■■□□□ 1.13
LRP4-202ENST00000527656 CPDO75976 1380 aa22.12■■□□□ 1.13
LRP4-202ENST00000527656 WNK3Q9BYP7 1800 aa22.11■■□□□ 1.13
LRP4-202ENST00000527656 TESK2Q96S53 571 aa22.11■■□□□ 1.13
LRP4-202ENST00000527656 NFAT5O94916 1531 aa22.1■■□□□ 1.13
LRP4-202ENST00000527656 SPATA31A5Q5VU36 1347 aa22.09■■□□□ 1.13
LRP4-202ENST00000527656 SPATA31A7Q8IWB4 1347 aa22.09■■□□□ 1.13
LRP4-202ENST00000527656 ONECUT3O60422 494 aaPredicted RBP22.09■■□□□ 1.13
LRP4-202ENST00000527656 SEPT12Q8IYM1 358 aa22.09■■□□□ 1.13
LRP4-202ENST00000527656 CCDC9Q9Y3X0 531 aaKnown RBP22.09■■□□□ 1.13
LRP4-202ENST00000527656 LTN1O94822 1766 aa22.09■■□□□ 1.13
LRP4-202ENST00000527656 TTC21BQ7Z4L5 1316 aa22.07■■□□□ 1.12
LRP4-202ENST00000527656 COL5A2P05997 1499 aaPredicted RBP22.07■■□□□ 1.12
LRP4-202ENST00000527656 ST20-MTHFSA0A0A6YYL1 179 aa22.06■■□□□ 1.12
LRP4-202ENST00000527656 GCP02774 474 aa22.06■■□□□ 1.12
LRP4-202ENST00000527656 FAM98CQ17RN3 349 aaKnown RBP22.06■■□□□ 1.12
LRP4-202ENST00000527656 NLRP13Q86W25 1043 aa22.06■■□□□ 1.12
LRP4-202ENST00000527656 MYOM1P52179 1685 aa22.06■■□□□ 1.12
LRP4-202ENST00000527656 KTN1Q86UP2 1357 aaKnown RBP22.05■■□□□ 1.12
LRP4-202ENST00000527656 USP47Q96K76 1375 aa22.05■■□□□ 1.12
LRP4-202ENST00000527656 A0A1W2PP64 1363 aa22.04■■□□□ 1.12
LRP4-202ENST00000527656 TNS1Q9HBL0 1735 aaKnown RBP22.04■■□□□ 1.12
LRP4-202ENST00000527656 NLRP6P59044 892 aa22.04■■□□□ 1.12
LRP4-202ENST00000527656 SPATA31A1Q5TZJ5 1347 aa22.04■■□□□ 1.12
LRP4-202ENST00000527656 PARP4Q9UKK3 1724 aaKnown RBP22.03■■□□□ 1.12
LRP4-202ENST00000527656 STRN4Q9NRL3 753 aa22.03■■□□□ 1.12
LRP4-202ENST00000527656 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
LRP4-202ENST00000527656 SLC12A5Q9H2X9 1139 aa22.02■■□□□ 1.12
LRP4-202ENST00000527656 ZNF692Q9BU19 519 aaPredicted RBP22.01■■□□□ 1.11
LRP4-202ENST00000527656 ZRANB1Q9UGI0 708 aa22.01■■□□□ 1.11
LRP4-202ENST00000527656 TTC21AQ8NDW8 1320 aa22.01■■□□□ 1.11
LRP4-202ENST00000527656 RGPD1P0DJD0 1748 aa22■■□□□ 1.11
LRP4-202ENST00000527656 LRRC37A3O60309 1634 aa21.99■■□□□ 1.11
LRP4-202ENST00000527656 LARP1Q6PKG0 1096 aaKnown RBP21.99■■□□□ 1.11
LRP4-202ENST00000527656 KRT27Q7Z3Y8 459 aa21.98■■□□□ 1.11
LRP4-202ENST00000527656 TMC1Q8TDI8 760 aa21.98■■□□□ 1.11
LRP4-202ENST00000527656 AATKQ6ZMQ8 1374 aa21.98■■□□□ 1.11
LRP4-202ENST00000527656 USP31Q70CQ4 1352 aa21.98■■□□□ 1.11
LRP4-202ENST00000527656 BLMP54132 1417 aaPredicted RBP21.97■■□□□ 1.11
LRP4-202ENST00000527656 EDC4Q6P2E9 1401 aaKnown RBP21.97■■□□□ 1.11
LRP4-202ENST00000527656 NME9Q86XW9 330 aa21.97■■□□□ 1.11
LRP4-202ENST00000527656 OVOS2A0A0J9YW53 1432 aa21.97■■□□□ 1.11
LRP4-202ENST00000527656 OVOS2Q6IE36 1432 aa21.97■■□□□ 1.11
LRP4-202ENST00000527656 A0A0G2JS52 829 aa21.96■■□□□ 1.11
LRP4-202ENST00000527656 MYT1Q01538 1121 aa21.96■■□□□ 1.11
LRP4-202ENST00000527656 FAM182BQ5T319 152 aa21.96■■□□□ 1.11
LRP4-202ENST00000527656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.96■■□□□ 1.11
LRP4-202ENST00000527656 PUS7Q96PZ0 661 aaKnown RBP21.96■■□□□ 1.11
LRP4-202ENST00000527656 KIF20BQ96Q89 1820 aa21.96■■□□□ 1.11
LRP4-202ENST00000527656 ABCC6O95255 1503 aa21.96■■□□□ 1.11
LRP4-202ENST00000527656 ZBTB7CA1YPR0 619 aa21.95■■□□□ 1.1
LRP4-202ENST00000527656 SOX12O15370 315 aa21.95■■□□□ 1.1
LRP4-202ENST00000527656 USP35Q9P2H5 1018 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms