RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 DHX29Q7Z478 1369 aaKnown RBP10.22□□□□□ -0.77
CSTF3-207ENST00000526480 KIAA1107Q9UPP5 1409 aa10.22□□□□□ -0.77
CSTF3-207ENST00000526480 CAMSAP2Q08AD1 1489 aa10.22□□□□□ -0.77
CSTF3-207ENST00000526480 MROH1Q8NDA8 1641 aa10.22□□□□□ -0.77
CSTF3-207ENST00000526480 KIF3BO15066 747 aa10.21□□□□□ -0.77
CSTF3-207ENST00000526480 CCDC125Q86Z20 511 aa10.21□□□□□ -0.77
CSTF3-207ENST00000526480 WASHC2CQ9Y4E1 1318 aa10.21□□□□□ -0.78
CSTF3-207ENST00000526480 BLMP54132 1417 aaPredicted RBP10.21□□□□□ -0.78
CSTF3-207ENST00000526480 MYO5BQ9ULV0 1848 aa10.21□□□□□ -0.78
CSTF3-207ENST00000526480 ATRNO75882 1429 aa10.2□□□□□ -0.78
CSTF3-207ENST00000526480 SPHKAPQ2M3C7 1700 aa10.19□□□□□ -0.78
CSTF3-207ENST00000526480 UNC13BO14795 1591 aa10.19□□□□□ -0.78
CSTF3-207ENST00000526480 ASXL1Q8IXJ9 1541 aa10.19□□□□□ -0.78
CSTF3-207ENST00000526480 FMN1Q68DA7 1419 aa10.19□□□□□ -0.78
CSTF3-207ENST00000526480 SETD5Q9C0A6 1442 aa10.19□□□□□ -0.78
CSTF3-207ENST00000526480 TMC2Q8TDI7 906 aa10.19□□□□□ -0.78
CSTF3-207ENST00000526480 NGLY1Q96IV0 654 aa10.19□□□□□ -0.78
CSTF3-207ENST00000526480 SLC26A8Q96RN1 970 aa10.19□□□□□ -0.78
CSTF3-207ENST00000526480 PLEKHH2Q8IVE3 1493 aa10.18□□□□□ -0.78
CSTF3-207ENST00000526480 PNPLA6Q8IY17 1366 aa10.18□□□□□ -0.78
CSTF3-207ENST00000526480 CHD4Q14839 1912 aa10.18□□□□□ -0.78
CSTF3-207ENST00000526480 DSG2Q14126 1118 aa10.18□□□□□ -0.78
CSTF3-207ENST00000526480 ARHGAP35Q9NRY4 1499 aa10.17□□□□□ -0.78
CSTF3-207ENST00000526480 SEMA3EO15041 775 aa10.17□□□□□ -0.78
CSTF3-207ENST00000526480 LMOD2Q6P5Q4 547 aa10.17□□□□□ -0.78
CSTF3-207ENST00000526480 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
CSTF3-207ENST00000526480 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.17□□□□□ -0.78
CSTF3-207ENST00000526480 GLI3P10071 1580 aa10.17□□□□□ -0.78
CSTF3-207ENST00000526480 MBD5Q9P267 1494 aa10.17□□□□□ -0.78
CSTF3-207ENST00000526480 TESPA1A2RU30 521 aaPredicted RBP10.16□□□□□ -0.78
CSTF3-207ENST00000526480 TULP1O00294 542 aaPredicted RBP10.16□□□□□ -0.78
CSTF3-207ENST00000526480 FOXK1P85037 733 aa10.16□□□□□ -0.78
CSTF3-207ENST00000526480 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.16□□□□□ -0.78
CSTF3-207ENST00000526480 TMEM2Q9UHN6 1383 aa10.15□□□□□ -0.78
CSTF3-207ENST00000526480 KIF3CO14782 793 aa10.15□□□□□ -0.78
CSTF3-207ENST00000526480 SNPHO15079 494 aa10.15□□□□□ -0.78
CSTF3-207ENST00000526480 BRINP3Q76B58 766 aa10.15□□□□□ -0.78
CSTF3-207ENST00000526480 RTEL1-TNFRSF6BF6WH68 1400 aa10.15□□□□□ -0.79
CSTF3-207ENST00000526480 EFCAB6Q5THR3 1501 aa10.14□□□□□ -0.79
CSTF3-207ENST00000526480 C2orf72A6NCS6 295 aa10.14□□□□□ -0.79
CSTF3-207ENST00000526480 ADAMTS2O95450 1211 aa10.14□□□□□ -0.79
CSTF3-207ENST00000526480 USP21Q9UK80 565 aa10.14□□□□□ -0.79
CSTF3-207ENST00000526480 EID1Q9Y6B2 187 aa10.13□□□□□ -0.79
CSTF3-207ENST00000526480 ZNF644Q9H582 1327 aaPredicted RBP10.12□□□□□ -0.79
CSTF3-207ENST00000526480 ZNF784Q8NCA9 323 aaPredicted RBP10.12□□□□□ -0.79
CSTF3-207ENST00000526480 KRTAP3-3Q9BYR6 98 aa10.12□□□□□ -0.79
CSTF3-207ENST00000526480 KRTAP3-2Q9BYR7 98 aa10.12□□□□□ -0.79
CSTF3-207ENST00000526480 EMILIN3Q9NT22 766 aa10.12□□□□□ -0.79
CSTF3-207ENST00000526480 TRPC5Q9UL62 973 aaPredicted RBP10.12□□□□□ -0.79
CSTF3-207ENST00000526480 TNS1Q9HBL0 1735 aaKnown RBP10.12□□□□□ -0.79
CSTF3-207ENST00000526480 CCDC18Q5T9S5 1454 aa10.11□□□□□ -0.79
CSTF3-207ENST00000526480 C1QTNF8P60827 252 aa10.11□□□□□ -0.79
CSTF3-207ENST00000526480 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
CSTF3-207ENST00000526480 DDX17Q92841 729 aaKnown RBP10.11□□□□□ -0.79
CSTF3-207ENST00000526480 COL22A1Q8NFW1 1626 aaPredicted RBP10.11□□□□□ -0.79
CSTF3-207ENST00000526480 EIF2AK4Q9P2K8 1649 aaKnown RBP10.11□□□□□ -0.79
CSTF3-207ENST00000526480 RGPD1P0DJD0 1748 aa10.1□□□□□ -0.79
CSTF3-207ENST00000526480 LAMC1P11047 1609 aa10.1□□□□□ -0.79
CSTF3-207ENST00000526480 R3HDM1Q15032 1099 aaKnown RBP10.09□□□□□ -0.79
CSTF3-207ENST00000526480 DPYSL4O14531 572 aa10.08□□□□□ -0.8
CSTF3-207ENST00000526480 FNBP4Q8N3X1 1017 aaPredicted RBP10.08□□□□□ -0.8
CSTF3-207ENST00000526480 MST1RQ04912 1400 aa10.07□□□□□ -0.8
CSTF3-207ENST00000526480 NCOA3Q9Y6Q9 1424 aa10.07□□□□□ -0.8
CSTF3-207ENST00000526480 ADGRB3O60242 1522 aa10.07□□□□□ -0.8
CSTF3-207ENST00000526480 NALCNQ8IZF0 1738 aa10.07□□□□□ -0.8
CSTF3-207ENST00000526480 EMP3P54852 163 aa10.07□□□□□ -0.8
CSTF3-207ENST00000526480 DOK7Q18PE1 504 aa10.07□□□□□ -0.8
CSTF3-207ENST00000526480 SMYD5Q6GMV2 418 aa10.07□□□□□ -0.8
CSTF3-207ENST00000526480 CFDP1Q9UEE9 299 aaPredicted RBP10.07□□□□□ -0.8
CSTF3-207ENST00000526480 GCC2Q8IWJ2 1684 aa10.06□□□□□ -0.8
CSTF3-207ENST00000526480 PDIA6Q15084 440 aa10.06□□□□□ -0.8
CSTF3-207ENST00000526480 C14orf37Q86TY3 774 aa10.06□□□□□ -0.8
CSTF3-207ENST00000526480 ZNF710Q8N1W2 664 aa10.06□□□□□ -0.8
CSTF3-207ENST00000526480 CCDC141Q6ZP82 1450 aa10.05□□□□□ -0.8
CSTF3-207ENST00000526480 RALGAPBQ86X10 1494 aa10.05□□□□□ -0.8
CSTF3-207ENST00000526480 NUP188Q5SRE5 1749 aa10.05□□□□□ -0.8
CSTF3-207ENST00000526480 SPDYE16A6NNV3 312 aaPredicted RBP10.05□□□□□ -0.8
CSTF3-207ENST00000526480 RIMBP2O15034 1052 aa10.05□□□□□ -0.8
CSTF3-207ENST00000526480 ATF3P18847 181 aa10.05□□□□□ -0.8
CSTF3-207ENST00000526480 LRRC59Q96AG4 307 aaKnown RBP10.05□□□□□ -0.8
CSTF3-207ENST00000526480 PTCH1Q13635 1447 aa10.05□□□□□ -0.8
CSTF3-207ENST00000526480 RREB1Q92766 1687 aa10.04□□□□□ -0.8
CSTF3-207ENST00000526480 CASKIN1Q8WXD9 1431 aa10.04□□□□□ -0.8
CSTF3-207ENST00000526480 CCNB3Q8WWL7 1395 aa10.03□□□□□ -0.8
CSTF3-207ENST00000526480 MLLT3P42568 568 aaPredicted RBP10.03□□□□□ -0.8
CSTF3-207ENST00000526480 SF3B2Q13435 895 aaKnown RBP10.03□□□□□ -0.8
CSTF3-207ENST00000526480 XRN1Q8IZH2 1706 aaKnown RBP10.03□□□□□ -0.8
CSTF3-207ENST00000526480 GJD4Q96KN9 370 aaPredicted RBP10.03□□□□□ -0.8
CSTF3-207ENST00000526480 POTEB3A0JP26 581 aa10.02□□□□□ -0.81
CSTF3-207ENST00000526480 POTEBQ6S5H4 581 aa10.02□□□□□ -0.81
CSTF3-207ENST00000526480 ZC3H15Q8WU90 426 aaKnown RBP10.02□□□□□ -0.81
CSTF3-207ENST00000526480 HS3ST6Q96QI5 342 aa10.02□□□□□ -0.81
CSTF3-207ENST00000526480 C19orf44Q9H6X5 657 aa10.02□□□□□ -0.81
CSTF3-207ENST00000526480 TRPM2O94759 1503 aa10.02□□□□□ -0.81
CSTF3-207ENST00000526480 ZFYVE9O95405 1425 aa10.01□□□□□ -0.81
CSTF3-207ENST00000526480 DCCP43146 1447 aa10.01□□□□□ -0.81
CSTF3-207ENST00000526480 ARHGAP31Q2M1Z3 1444 aa10.01□□□□□ -0.81
CSTF3-207ENST00000526480 HOXB3P14651 431 aaPredicted RBP10.01□□□□□ -0.81
CSTF3-207ENST00000526480 MYOM2P54296 1465 aa10.01□□□□□ -0.81
CSTF3-207ENST00000526480 PLCH1Q4KWH8 1693 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms