RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 COL25A1Q9BXS0 654 aaPredicted RBP11.57□□□□□ -0.56
C11orf54-203ENST00000526335 HOXA2O43364 376 aa11.56□□□□□ -0.56
C11orf54-203ENST00000526335 MPNDQ8N594 471 aa11.56□□□□□ -0.56
C11orf54-203ENST00000526335 ADAM23O75077 832 aa11.55□□□□□ -0.56
C11orf54-203ENST00000526335 ZFAND3Q9H8U3 227 aa11.55□□□□□ -0.56
C11orf54-203ENST00000526335 CCNYL3P0C7X3 344 aa11.54□□□□□ -0.56
C11orf54-203ENST00000526335 BMP2P12643 396 aa11.54□□□□□ -0.56
C11orf54-203ENST00000526335 UNC93B1Q9H1C4 597 aa11.54□□□□□ -0.56
C11orf54-203ENST00000526335 GPR37O15354 613 aa11.54□□□□□ -0.56
C11orf54-203ENST00000526335 ZIC2O95409 532 aaPredicted RBP11.54□□□□□ -0.56
C11orf54-203ENST00000526335 WHAMMQ8TF30 809 aa11.54□□□□□ -0.56
C11orf54-203ENST00000526335 RETREG3Q86VR2 466 aa11.53□□□□□ -0.56
C11orf54-203ENST00000526335 UPP2O95045 317 aa11.52□□□□□ -0.57
C11orf54-203ENST00000526335 MS4A1P11836 297 aa11.52□□□□□ -0.57
C11orf54-203ENST00000526335 ARHGEF15O94989 841 aa11.51□□□□□ -0.57
C11orf54-203ENST00000526335 SMYD5Q6GMV2 418 aa11.51□□□□□ -0.57
C11orf54-203ENST00000526335 ZNF511Q8NB15 262 aa11.51□□□□□ -0.57
C11orf54-203ENST00000526335 SCARF2Q96GP6 870 aaPredicted RBP11.51□□□□□ -0.57
C11orf54-203ENST00000526335 DNMT3LQ9UJW3 386 aa11.51□□□□□ -0.57
C11orf54-203ENST00000526335 TESPA1A2RU30 521 aaPredicted RBP11.5□□□□□ -0.57
C11orf54-203ENST00000526335 RNFT1Q5M7Z0 435 aa11.5□□□□□ -0.57
C11orf54-203ENST00000526335 ITPKCQ96DU7 683 aa11.5□□□□□ -0.57
C11orf54-203ENST00000526335 PLCB2Q00722 1185 aa11.49□□□□□ -0.57
C11orf54-203ENST00000526335 MSTNO14793 375 aa11.48□□□□□ -0.57
C11orf54-203ENST00000526335 SOS2Q07890 1332 aaPredicted RBP11.47□□□□□ -0.57
C11orf54-203ENST00000526335 ARID5BQ14865 1188 aa11.47□□□□□ -0.57
C11orf54-203ENST00000526335 LINC00528Q8N1L1 170 aa11.47□□□□□ -0.57
C11orf54-203ENST00000526335 PSMG3-AS1Q96PY0 264 aa11.47□□□□□ -0.57
C11orf54-203ENST00000526335 EVA1BQ9NVM1 165 aa11.47□□□□□ -0.57
C11orf54-203ENST00000526335 FAM174AQ8TBP5 190 aa11.46□□□□□ -0.57
C11orf54-203ENST00000526335 SLURP2P0DP57 97 aa11.45□□□□□ -0.58
C11orf54-203ENST00000526335 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.44□□□□□ -0.58
C11orf54-203ENST00000526335 C6orf229H3BNL8 230 aa11.43□□□□□ -0.58
C11orf54-203ENST00000526335 PTSQ03393 145 aa11.43□□□□□ -0.58
C11orf54-203ENST00000526335 KCNH2Q12809 1159 aa11.43□□□□□ -0.58
C11orf54-203ENST00000526335 PTPRNQ16849 979 aa11.43□□□□□ -0.58
C11orf54-203ENST00000526335 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.42□□□□□ -0.58
C11orf54-203ENST00000526335 NANOS1Q8WY41 292 aaKnown RBP11.42□□□□□ -0.58
C11orf54-203ENST00000526335 KRTAP9-2Q9BYQ4 174 aa11.42□□□□□ -0.58
C11orf54-203ENST00000526335 NR3C2P08235 984 aa11.41□□□□□ -0.58
C11orf54-203ENST00000526335 PLA2G4EQ3MJ16 856 aa11.41□□□□□ -0.58
C11orf54-203ENST00000526335 SPOCK3Q9BQ16 436 aa11.41□□□□□ -0.58
C11orf54-203ENST00000526335 MEIOBQ8N635 442 aa11.41□□□□□ -0.58
C11orf54-203ENST00000526335 CDK15Q96Q40 435 aa11.41□□□□□ -0.58
C11orf54-203ENST00000526335 MDM2Q00987 491 aaPredicted RBP11.39□□□□□ -0.59
C11orf54-203ENST00000526335 NR5A1Q13285 461 aa11.39□□□□□ -0.59
C11orf54-203ENST00000526335 KRTAP9-6A0A140TA67 174 aa11.38□□□□□ -0.59
C11orf54-203ENST00000526335 NUTM1Q86Y26 1132 aa11.38□□□□□ -0.59
C11orf54-203ENST00000526335 CCDC155Q8N6L0 562 aa11.38□□□□□ -0.59
C11orf54-203ENST00000526335 FIGNL2A6NMB9 653 aa11.37□□□□□ -0.59
C11orf54-203ENST00000526335 SPTLC1O15269 473 aa11.37□□□□□ -0.59
C11orf54-203ENST00000526335 VWA5B2Q8N398 1253 aa11.37□□□□□ -0.59
C11orf54-203ENST00000526335 TTLL8A6PVC2 850 aa11.36□□□□□ -0.59
C11orf54-203ENST00000526335 FDX1P10109 184 aa11.36□□□□□ -0.59
C11orf54-203ENST00000526335 GALNT6Q8NCL4 622 aa11.36□□□□□ -0.59
C11orf54-203ENST00000526335 CDC14CA4D256 554 aa11.35□□□□□ -0.59
C11orf54-203ENST00000526335 HAP1P54257 671 aaPredicted RBP11.35□□□□□ -0.59
C11orf54-203ENST00000526335 MAP3K10Q02779 954 aa11.35□□□□□ -0.59
C11orf54-203ENST00000526335 Q8N3U1 123 aa11.35□□□□□ -0.59
C11orf54-203ENST00000526335 PCDHGC3Q9UN70 934 aa11.35□□□□□ -0.59
C11orf54-203ENST00000526335 GPIHBP1Q8IV16 184 aa11.34□□□□□ -0.59
C11orf54-203ENST00000526335 DCAF5Q96JK2 942 aa11.34□□□□□ -0.59
C11orf54-203ENST00000526335 TSEN34Q9BSV6 310 aaKnown RBP11.34□□□□□ -0.59
C11orf54-203ENST00000526335 LYPD4Q6UWN0 246 aa11.33□□□□□ -0.6
C11orf54-203ENST00000526335 SV2AQ7L0J3 742 aa11.33□□□□□ -0.6
C11orf54-203ENST00000526335 FOXJ1Q92949 421 aa11.33□□□□□ -0.6
C11orf54-203ENST00000526335 GRM5P41594 1212 aa11.32□□□□□ -0.6
C11orf54-203ENST00000526335 K7ELQ4 463 aaPredicted RBP11.31□□□□□ -0.6
C11orf54-203ENST00000526335 ADAMTS2O95450 1211 aa11.31□□□□□ -0.6
C11orf54-203ENST00000526335 ITGB2P05107 769 aa11.3□□□□□ -0.6
C11orf54-203ENST00000526335 CTHP32929 405 aa11.3□□□□□ -0.6
C11orf54-203ENST00000526335 PROCP04070 461 aa11.29□□□□□ -0.6
C11orf54-203ENST00000526335 PRR7Q8TB68 274 aa11.29□□□□□ -0.6
C11orf54-203ENST00000526335 PHF20L1A8MW92 1017 aa11.28□□□□□ -0.6
C11orf54-203ENST00000526335 ITGA6P23229 1130 aa11.28□□□□□ -0.6
C11orf54-203ENST00000526335 AGERQ15109 404 aa11.28□□□□□ -0.6
C11orf54-203ENST00000526335 CNTNAP5Q8WYK1 1306 aa11.27□□□□□ -0.61
C11orf54-203ENST00000526335 SLC35F4A4IF30 521 aa11.27□□□□□ -0.61
C11orf54-203ENST00000526335 KRTAP1-3Q8IUG1 177 aa11.27□□□□□ -0.61
C11orf54-203ENST00000526335 ENAMQ9NRM1 1142 aa11.27□□□□□ -0.61
C11orf54-203ENST00000526335 CELA2BP08218 269 aaPredicted RBP11.26□□□□□ -0.61
C11orf54-203ENST00000526335 MAP2K5Q13163 448 aa11.23□□□□□ -0.61
C11orf54-203ENST00000526335 KDM2AQ9Y2K7 1162 aa11.23□□□□□ -0.61
C11orf54-203ENST00000526335 FSHRP23945 695 aa11.22□□□□□ -0.61
C11orf54-203ENST00000526335 SRSF11Q05519 484 aaKnown RBP11.22□□□□□ -0.61
C11orf54-203ENST00000526335 C4orf48Q5BLP8 95 aa11.22□□□□□ -0.61
C11orf54-203ENST00000526335 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
C11orf54-203ENST00000526335 SH3RF1Q7Z6J0 888 aa11.22□□□□□ -0.61
C11orf54-203ENST00000526335 FAM217BQ9NTX9 383 aaPredicted RBP11.22□□□□□ -0.61
C11orf54-203ENST00000526335 BEND7Q8N7W2 519 aaPredicted RBP11.21□□□□□ -0.61
C11orf54-203ENST00000526335 TULP1O00294 542 aaPredicted RBP11.2□□□□□ -0.62
C11orf54-203ENST00000526335 IRF6O14896 467 aa11.2□□□□□ -0.62
C11orf54-203ENST00000526335 PODNQ7Z5L7 613 aa11.2□□□□□ -0.62
C11orf54-203ENST00000526335 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
C11orf54-203ENST00000526335 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
C11orf54-203ENST00000526335 NDUFV2P19404 249 aa11.19□□□□□ -0.62
C11orf54-203ENST00000526335 BPHLQ86WA6 291 aaPredicted RBP11.18□□□□□ -0.62
C11orf54-203ENST00000526335 CLCN1P35523 988 aa11.17□□□□□ -0.62
C11orf54-203ENST00000526335 MTMR2Q13614 643 aa11.17□□□□□ -0.62
C11orf54-203ENST00000526335 SPDYE5A6NIY4 337 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms