RNA–Protein interactions for RNA: ENST00000525443.1

LTBP3-204, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,162 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-204ENST00000525443 FOXD4L1Q9NU39 408 aa18.38■□□□□ 0.53
LTBP3-204ENST00000525443 SPHKAPQ2M3C7 1700 aa18.38■□□□□ 0.53
LTBP3-204ENST00000525443 PER1O15534 1290 aaPredicted RBP18.38■□□□□ 0.53
LTBP3-204ENST00000525443 RGS22Q8NE09 1264 aa18.38■□□□□ 0.53
LTBP3-204ENST00000525443 DDX49Q9Y6V7 483 aaKnown RBP18.38■□□□□ 0.53
LTBP3-204ENST00000525443 PDLIM2Q96JY6 352 aa18.37■□□□□ 0.53
LTBP3-204ENST00000525443 VWDEQ8N2E2 1590 aa18.37■□□□□ 0.53
LTBP3-204ENST00000525443 NEO1Q92859 1461 aa18.37■□□□□ 0.53
LTBP3-204ENST00000525443 DDIT3P35638 169 aa18.37■□□□□ 0.53
LTBP3-204ENST00000525443 RBSNQ9H1K0 784 aa18.37■□□□□ 0.53
LTBP3-204ENST00000525443 CHRM1P11229 460 aaPredicted RBP18.36■□□□□ 0.53
LTBP3-204ENST00000525443 MROH1Q8NDA8 1641 aa18.36■□□□□ 0.53
LTBP3-204ENST00000525443 NPATQ14207 1427 aa18.35■□□□□ 0.53
LTBP3-204ENST00000525443 CFAP74Q9C0B2 1584 aa18.35■□□□□ 0.53
LTBP3-204ENST00000525443 COL17A1Q9UMD9 1497 aaPredicted RBP18.35■□□□□ 0.53
LTBP3-204ENST00000525443 CDCA8Q53HL2 280 aa18.35■□□□□ 0.53
LTBP3-204ENST00000525443 U2AF2P26368 475 aaKnown RBP eCLIP18.34■□□□□ 0.53
LTBP3-204ENST00000525443 RAB3GAP1Q15042 981 aa18.34■□□□□ 0.53
LTBP3-204ENST00000525443 BLMP54132 1417 aaPredicted RBP18.34■□□□□ 0.53
LTBP3-204ENST00000525443 BRD2P25440 801 aaKnown RBP18.34■□□□□ 0.53
LTBP3-204ENST00000525443 KNSTRNQ9Y448 316 aa18.34■□□□□ 0.53
LTBP3-204ENST00000525443 ZMYM4Q5VZL5 1548 aa18.34■□□□□ 0.53
LTBP3-204ENST00000525443 HECW2Q9P2P5 1572 aa18.34■□□□□ 0.53
LTBP3-204ENST00000525443 ZBTB9Q96C00 473 aa18.34■□□□□ 0.53
LTBP3-204ENST00000525443 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.53
LTBP3-204ENST00000525443 SCAF11Q99590 1463 aaKnown RBP18.32■□□□□ 0.52
LTBP3-204ENST00000525443 PLEKHH1Q9ULM0 1364 aa18.32■□□□□ 0.52
LTBP3-204ENST00000525443 YEATS2Q9ULM3 1422 aa18.32■□□□□ 0.52
LTBP3-204ENST00000525443 MCM5P33992 734 aa18.32■□□□□ 0.52
LTBP3-204ENST00000525443 TRAK1Q9UPV9 953 aa18.32■□□□□ 0.52
LTBP3-204ENST00000525443 COG6Q9Y2V7 657 aa18.32■□□□□ 0.52
LTBP3-204ENST00000525443 PDCL2Q8N4E4 241 aa18.32■□□□□ 0.52
LTBP3-204ENST00000525443 CLUAP1Q96AJ1 413 aa18.32■□□□□ 0.52
LTBP3-204ENST00000525443 TMEM132EQ6IEE7 984 aa18.31■□□□□ 0.52
LTBP3-204ENST00000525443 CAVIN1Q6NZI2 390 aaKnown RBP18.31■□□□□ 0.52
LTBP3-204ENST00000525443 NOS1P29475 1434 aa18.31■□□□□ 0.52
LTBP3-204ENST00000525443 PARD3Q8TEW0 1356 aa18.31■□□□□ 0.52
LTBP3-204ENST00000525443 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
LTBP3-204ENST00000525443 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
LTBP3-204ENST00000525443 PDZRN3Q9UPQ7 1066 aa18.3■□□□□ 0.52
LTBP3-204ENST00000525443 MADDQ8WXG6 1647 aa18.3■□□□□ 0.52
LTBP3-204ENST00000525443 FRMPD1Q5SYB0 1578 aa18.3■□□□□ 0.52
LTBP3-204ENST00000525443 GOLGA2Q08379 1002 aa18.3■□□□□ 0.52
LTBP3-204ENST00000525443 KLHL40Q2TBA0 621 aa18.3■□□□□ 0.52
LTBP3-204ENST00000525443 PPRC1Q5VV67 1664 aaKnown RBP18.3■□□□□ 0.52
LTBP3-204ENST00000525443 PTMSP20962 102 aa18.3■□□□□ 0.52
LTBP3-204ENST00000525443 SSFA2P28290 1259 aa18.3■□□□□ 0.52
LTBP3-204ENST00000525443 PANK1Q8TE04 598 aa18.3■□□□□ 0.52
LTBP3-204ENST00000525443 DNAJC2Q99543 621 aaKnown RBP18.3■□□□□ 0.52
LTBP3-204ENST00000525443 BCL2L12Q9HB09 334 aa18.3■□□□□ 0.52
LTBP3-204ENST00000525443 CCDC39Q9UFE4 941 aa18.3■□□□□ 0.52
LTBP3-204ENST00000525443 CEP152O94986 1710 aa18.29■□□□□ 0.52
LTBP3-204ENST00000525443 PRIM1P49642 420 aaKnown RBP18.29■□□□□ 0.52
LTBP3-204ENST00000525443 NCOA3Q9Y6Q9 1424 aa18.29■□□□□ 0.52
LTBP3-204ENST00000525443 MLECQ14165 292 aa18.28■□□□□ 0.52
LTBP3-204ENST00000525443 MPNDQ8N594 471 aa18.28■□□□□ 0.52
LTBP3-204ENST00000525443 KIF3AQ9Y496 699 aa18.28■□□□□ 0.52
LTBP3-204ENST00000525443 KIAA2012Q0VF49 1180 aa18.28■□□□□ 0.52
LTBP3-204ENST00000525443 RNF17Q9BXT8 1623 aaKnown RBP18.28■□□□□ 0.52
LTBP3-204ENST00000525443 GOLGA6L22H0YM25 854 aa18.28■□□□□ 0.52
LTBP3-204ENST00000525443 ZNF445P59923 1031 aa18.28■□□□□ 0.52
LTBP3-204ENST00000525443 IDI1Q13907 227 aa18.28■□□□□ 0.52
LTBP3-204ENST00000525443 ZSCAN23Q3MJ62 389 aa18.28■□□□□ 0.52
LTBP3-204ENST00000525443 CHMP4CQ96CF2 233 aa18.28■□□□□ 0.52
LTBP3-204ENST00000525443 ABCA6Q8N139 1617 aa18.27■□□□□ 0.52
LTBP3-204ENST00000525443 IBTKQ9P2D0 1353 aaPredicted RBP18.27■□□□□ 0.52
LTBP3-204ENST00000525443 SMC5Q8IY18 1101 aa18.27■□□□□ 0.51
LTBP3-204ENST00000525443 VGFO15240 615 aaPredicted RBP18.26■□□□□ 0.51
LTBP3-204ENST00000525443 CIZ1Q9ULV3 898 aaPredicted RBP18.26■□□□□ 0.51
LTBP3-204ENST00000525443 LAMC1P11047 1609 aa18.26■□□□□ 0.51
LTBP3-204ENST00000525443 LMTK2Q8IWU2 1503 aa18.26■□□□□ 0.51
LTBP3-204ENST00000525443 PTMAP06454 111 aaKnown RBP18.26■□□□□ 0.51
LTBP3-204ENST00000525443 PRIMPOLQ96LW4 560 aa18.26■□□□□ 0.51
LTBP3-204ENST00000525443 RIMBP3CA6NJZ7 1639 aa18.26■□□□□ 0.51
LTBP3-204ENST00000525443 RIMBP3BA6NNM3 1639 aa18.26■□□□□ 0.51
LTBP3-204ENST00000525443 RIMBP3Q9UFD9 1639 aa18.26■□□□□ 0.51
LTBP3-204ENST00000525443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.25■□□□□ 0.51
LTBP3-204ENST00000525443 TRIM6-TRIM34B2RNG4 842 aa18.25■□□□□ 0.51
LTBP3-204ENST00000525443 TRIM34Q9BYJ4 488 aa18.25■□□□□ 0.51
LTBP3-204ENST00000525443 GTF2F1P35269 517 aaKnown RBP eCLIP18.25■□□□□ 0.515e-7■■■■□ 26.1
LTBP3-204ENST00000525443 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.24■□□□□ 0.51
LTBP3-204ENST00000525443 CGNL1Q0VF96 1302 aa18.24■□□□□ 0.51
LTBP3-204ENST00000525443 HMGN5P82970 282 aaKnown RBP18.24■□□□□ 0.51
LTBP3-204ENST00000525443 FBXO31Q5XUX0 539 aaPredicted RBP18.24■□□□□ 0.51
LTBP3-204ENST00000525443 SPINK5Q9NQ38 1064 aaPredicted RBP18.24■□□□□ 0.51
LTBP3-204ENST00000525443 STAG3Q9UJ98 1225 aa18.24■□□□□ 0.51
LTBP3-204ENST00000525443 ABCC3O15438 1527 aa18.23■□□□□ 0.51
LTBP3-204ENST00000525443 RBM25P49756 843 aaKnown RBP18.23■□□□□ 0.51
LTBP3-204ENST00000525443 SLC20A2Q08357 652 aa18.23■□□□□ 0.51
LTBP3-204ENST00000525443 C17orf53Q8N3J3 647 aaPredicted RBP18.23■□□□□ 0.51
LTBP3-204ENST00000525443 CAPN2P17655 700 aa18.23■□□□□ 0.51
LTBP3-204ENST00000525443 KIF1BO60333 1816 aa18.22■□□□□ 0.51
LTBP3-204ENST00000525443 SLFN5Q08AF3 891 aa18.22■□□□□ 0.51
LTBP3-204ENST00000525443 C14orf93Q9H972 538 aaKnown RBP18.22■□□□□ 0.51
LTBP3-204ENST00000525443 PCDHB15Q9Y5E8 787 aa18.22■□□□□ 0.51
LTBP3-204ENST00000525443 BAG4O95429 457 aaKnown RBP18.22■□□□□ 0.51
LTBP3-204ENST00000525443 SAFB2Q14151 953 aaKnown RBP eCLIP18.21■□□□□ 0.51
LTBP3-204ENST00000525443 RNF214Q8ND24 703 aa18.21■□□□□ 0.51
LTBP3-204ENST00000525443 TRERF1Q96PN7 1200 aa18.21■□□□□ 0.51
LTBP3-204ENST00000525443 RBM27Q9P2N5 1060 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms