RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 RBM27Q9P2N5 1060 aaKnown RBP6.19□□□□□ -1.42
CSDE1-209ENST00000525132 FAM198AQ9UFP1 575 aa6.19□□□□□ -1.42
CSDE1-209ENST00000525132 AXIN2Q9Y2T1 843 aa6.19□□□□□ -1.42
CSDE1-209ENST00000525132 A0A0C4DFX4 3053 aa6.19□□□□□ -1.42
CSDE1-209ENST00000525132 KDM5CP41229 1560 aa6.18□□□□□ -1.42
CSDE1-209ENST00000525132 NEURL4Q96JN8 1562 aa6.18□□□□□ -1.42
CSDE1-209ENST00000525132 COL16A1Q07092 1604 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-209ENST00000525132 FHAD1B1AJZ9 1412 aa6.18□□□□□ -1.42
CSDE1-209ENST00000525132 ATP10DQ9P241 1426 aa6.18□□□□□ -1.42
CSDE1-209ENST00000525132 BHMG1C9JSJ3 638 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-209ENST00000525132 MAP3K7O43318 606 aa6.18□□□□□ -1.42
CSDE1-209ENST00000525132 KCNK17Q96T54 332 aa6.18□□□□□ -1.42
CSDE1-209ENST00000525132 SYT17Q9BSW7 474 aa6.18□□□□□ -1.42
CSDE1-209ENST00000525132 ZFYVE16Q7Z3T8 1539 aa6.18□□□□□ -1.42
CSDE1-209ENST00000525132 CUL9Q8IWT3 2517 aa6.18□□□□□ -1.42
CSDE1-209ENST00000525132 UNC79Q9P2D8 2635 aa6.17□□□□□ -1.42
CSDE1-209ENST00000525132 WDR90Q96KV7 1748 aa6.17□□□□□ -1.42
CSDE1-209ENST00000525132 C3orf80F5H4A9 247 aa6.17□□□□□ -1.42
CSDE1-209ENST00000525132 ONECUT3O60422 494 aaPredicted RBP6.17□□□□□ -1.42
CSDE1-209ENST00000525132 LMOD2Q6P5Q4 547 aa6.17□□□□□ -1.42
CSDE1-209ENST00000525132 VPS9D1Q9Y2B5 631 aa6.17□□□□□ -1.42
CSDE1-209ENST00000525132 PDE4DIPQ5VU43 2346 aa6.17□□□□□ -1.42
CSDE1-209ENST00000525132 ABCA8O94911 1581 aa6.17□□□□□ -1.42
CSDE1-209ENST00000525132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.17□□□□□ -1.42
CSDE1-209ENST00000525132 RALGAPBQ86X10 1494 aa6.16□□□□□ -1.42
CSDE1-209ENST00000525132 SMYD5Q6GMV2 418 aa6.16□□□□□ -1.42
CSDE1-209ENST00000525132 TRPC5Q9UL62 973 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-209ENST00000525132 ABCA5Q8WWZ7 1642 aa6.16□□□□□ -1.42
CSDE1-209ENST00000525132 ADGBQ8N7X0 1667 aa6.16□□□□□ -1.42
CSDE1-209ENST00000525132 TNIKQ9UKE5 1360 aa6.16□□□□□ -1.42
CSDE1-209ENST00000525132 SYNMO15061 1565 aa6.15□□□□□ -1.42
CSDE1-209ENST00000525132 GPR162Q16538 588 aa6.15□□□□□ -1.42
CSDE1-209ENST00000525132 PROX2Q3B8N5 592 aa6.15□□□□□ -1.42
CSDE1-209ENST00000525132 ADGRD1Q6QNK2 874 aa6.15□□□□□ -1.42
CSDE1-209ENST00000525132 ESF1Q9H501 851 aaKnown RBP6.15□□□□□ -1.42
CSDE1-209ENST00000525132 TSKSQ9UJT2 592 aa6.15□□□□□ -1.42
CSDE1-209ENST00000525132 NEO1Q92859 1461 aa6.15□□□□□ -1.43
CSDE1-209ENST00000525132 TRIM6-TRIM34B2RNG4 842 aa6.14□□□□□ -1.43
CSDE1-209ENST00000525132 PRSS12P56730 875 aa6.14□□□□□ -1.43
CSDE1-209ENST00000525132 Q6ZNB5 142 aa6.14□□□□□ -1.43
CSDE1-209ENST00000525132 FHDC1Q9C0D6 1143 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-209ENST00000525132 USP21Q9UK80 565 aa6.14□□□□□ -1.43
CSDE1-209ENST00000525132 SHPRHQ149N8 1683 aa6.14□□□□□ -1.43
CSDE1-209ENST00000525132 RICTORQ6R327 1708 aa6.13□□□□□ -1.43
CSDE1-209ENST00000525132 ZMYND10O75800 440 aa6.13□□□□□ -1.43
CSDE1-209ENST00000525132 FCHSD2O94868 740 aa6.13□□□□□ -1.43
CSDE1-209ENST00000525132 HIC1Q14526 733 aa6.13□□□□□ -1.43
CSDE1-209ENST00000525132 HABP4Q5JVS0 413 aaKnown RBP6.13□□□□□ -1.43
CSDE1-209ENST00000525132 CDCA7LQ96GN5 454 aa6.13□□□□□ -1.43
CSDE1-209ENST00000525132 DENND4BO75064 1496 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-209ENST00000525132 EFCAB5A4FU69 1503 aa6.13□□□□□ -1.43
CSDE1-209ENST00000525132 CEP170BQ9Y4F5 1589 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-209ENST00000525132 ZNF142P52746 1687 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-209ENST00000525132 PKD1L2Q7Z442 2459 aa6.13□□□□□ -1.43
CSDE1-209ENST00000525132 GNPATO15228 680 aa6.12□□□□□ -1.43
CSDE1-209ENST00000525132 WIZO95785 1651 aa6.12□□□□□ -1.43
CSDE1-209ENST00000525132 FECHP22830 423 aa6.12□□□□□ -1.43
CSDE1-209ENST00000525132 NPATQ14207 1427 aa6.12□□□□□ -1.43
CSDE1-209ENST00000525132 EZH2Q15910 746 aaKnown RBP6.12□□□□□ -1.43
CSDE1-209ENST00000525132 PADI6Q6TGC4 694 aa6.12□□□□□ -1.43
CSDE1-209ENST00000525132 GPIHBP1Q8IV16 184 aa6.12□□□□□ -1.43
CSDE1-209ENST00000525132 ZC3H15Q8WU90 426 aaKnown RBP6.12□□□□□ -1.43
CSDE1-209ENST00000525132 DACH1Q9UI36 760 aa6.12□□□□□ -1.43
CSDE1-209ENST00000525132 RABGEF1Q9UJ41 708 aa6.12□□□□□ -1.43
CSDE1-209ENST00000525132 PRDM10Q9NQV6 1147 aa6.11□□□□□ -1.43
CSDE1-209ENST00000525132 HCSTQ9UBK5 93 aa6.11□□□□□ -1.43
CSDE1-209ENST00000525132 POLR1AO95602 1720 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-209ENST00000525132 ATP10AO60312 1499 aa6.1□□□□□ -1.43
CSDE1-209ENST00000525132 BARGINQ6ZT62 677 aa6.1□□□□□ -1.43
CSDE1-209ENST00000525132 ANKLE2Q86XL3 938 aa6.1□□□□□ -1.43
CSDE1-209ENST00000525132 EYA1Q99502 592 aa6.1□□□□□ -1.43
CSDE1-209ENST00000525132 SLAIN2Q9P270 581 aa6.1□□□□□ -1.43
CSDE1-209ENST00000525132 ADGRG1Q9Y653 693 aa6.1□□□□□ -1.43
CSDE1-209ENST00000525132 NUTM2FA1L443 756 aa6.09□□□□□ -1.43
CSDE1-209ENST00000525132 ARID3CA6NKF2 412 aa6.09□□□□□ -1.43
CSDE1-209ENST00000525132 MYO3AQ8NEV4 1616 aa6.09□□□□□ -1.43
CSDE1-209ENST00000525132 UNC13BO14795 1591 aa6.09□□□□□ -1.43
CSDE1-209ENST00000525132 NRKQ7Z2Y5 1582 aa6.09□□□□□ -1.43
CSDE1-209ENST00000525132 NPHP4O75161 1426 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-209ENST00000525132 FOXN1O15353 648 aa6.08□□□□□ -1.44
CSDE1-209ENST00000525132 ADAMTS2O95450 1211 aa6.08□□□□□ -1.44
CSDE1-209ENST00000525132 MAP2K5Q13163 448 aa6.08□□□□□ -1.44
CSDE1-209ENST00000525132 KIAA1468Q9P260 1216 aa6.08□□□□□ -1.44
CSDE1-209ENST00000525132 ATRNO75882 1429 aa6.08□□□□□ -1.44
CSDE1-209ENST00000525132 C9orf84Q5VXU9 1444 aa6.08□□□□□ -1.44
CSDE1-209ENST00000525132 PLA2G5P39877 138 aa6.07□□□□□ -1.44
CSDE1-209ENST00000525132 FXR1P51114 621 aaKnown RBP eCLIP6.07□□□□□ -1.44
CSDE1-209ENST00000525132 LAPTM4BQ86VI4 370 aa6.07□□□□□ -1.44
CSDE1-209ENST00000525132 PHOX2BQ99453 314 aa6.07□□□□□ -1.44
CSDE1-209ENST00000525132 ZMYM4Q5VZL5 1548 aa6.07□□□□□ -1.44
CSDE1-209ENST00000525132 MAGI2Q86UL8 1455 aa6.07□□□□□ -1.44
CSDE1-209ENST00000525132 TULP1O00294 542 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-209ENST00000525132 TOMM70O94826 608 aa6.06□□□□□ -1.44
CSDE1-209ENST00000525132 PXYLP1Q8TE99 480 aa6.06□□□□□ -1.44
CSDE1-209ENST00000525132 TATDN2Q93075 761 aa6.06□□□□□ -1.44
CSDE1-209ENST00000525132 GCC1Q96CN9 775 aa6.06□□□□□ -1.44
CSDE1-209ENST00000525132 RAPGEFL1Q9UHV5 662 aa6.06□□□□□ -1.44
CSDE1-209ENST00000525132 MYOM1P52179 1685 aa6.05□□□□□ -1.44
CSDE1-209ENST00000525132 LRRC9Q6ZRR7 1453 aa6.05□□□□□ -1.44
CSDE1-209ENST00000525132 METTL3Q86U44 580 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms