RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 HCSTQ9UBK5 93 aa9.08□□□□□ -0.96
CTNNA1-238ENST00000523298 ITGBL1O95965 494 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-238ENST00000523298 CTHP32929 405 aa9.06□□□□□ -0.96
CTNNA1-238ENST00000523298 KCNH2Q12809 1159 aa9.06□□□□□ -0.96
CTNNA1-238ENST00000523298 PLA2G2CQ5R387 149 aa9.05□□□□□ -0.96
CTNNA1-238ENST00000523298 FKBPLQ9UIM3 349 aa9.05□□□□□ -0.96
CTNNA1-238ENST00000523298 FBXO45P0C2W1 286 aa9.04□□□□□ -0.96
CTNNA1-238ENST00000523298 FCF1Q9Y324 198 aaKnown RBP9.04□□□□□ -0.96
CTNNA1-238ENST00000523298 CCDC24Q8N4L8 307 aa9.03□□□□□ -0.96
CTNNA1-238ENST00000523298 GLMNQ92990 594 aa9.03□□□□□ -0.96
CTNNA1-238ENST00000523298 KCNC4Q03721 635 aa9.02□□□□□ -0.97
CTNNA1-238ENST00000523298 UNC93B1Q9H1C4 597 aa9.02□□□□□ -0.97
CTNNA1-238ENST00000523298 RNF223E7ERA6 249 aa9.01□□□□□ -0.97
CTNNA1-238ENST00000523298 EMID1Q96A84 441 aaPredicted RBP9.01□□□□□ -0.97
CTNNA1-238ENST00000523298 ALG2Q9H553 416 aa9.01□□□□□ -0.97
CTNNA1-238ENST00000523298 HDGFL1Q5TGJ6 251 aa9□□□□□ -0.97
CTNNA1-238ENST00000523298 PRM3Q9NNZ6 103 aa9□□□□□ -0.97
CTNNA1-238ENST00000523298 UCN2Q96RP3 112 aa8.99□□□□□ -0.97
CTNNA1-238ENST00000523298 NR1H3Q13133 447 aa8.98□□□□□ -0.97
CTNNA1-238ENST00000523298 WASHC4Q2M389 1173 aa8.98□□□□□ -0.97
CTNNA1-238ENST00000523298 LINC01559Q495D7 138 aa8.98□□□□□ -0.97
CTNNA1-238ENST00000523298 C4orf48Q5BLP8 95 aa8.98□□□□□ -0.97
CTNNA1-238ENST00000523298 PPP1R18Q6NYC8 613 aa8.98□□□□□ -0.97
CTNNA1-238ENST00000523298 SH3BP5LQ7L8J4 393 aa8.97□□□□□ -0.97
CTNNA1-238ENST00000523298 BAP1Q92560 729 aa8.97□□□□□ -0.97
CTNNA1-238ENST00000523298 FOXJ1Q92949 421 aa8.97□□□□□ -0.97
CTNNA1-238ENST00000523298 CALR3Q96L12 384 aaKnown RBP8.97□□□□□ -0.97
CTNNA1-238ENST00000523298 ZBBXA8MT70 800 aa8.96□□□□□ -0.98
CTNNA1-238ENST00000523298 PDXDC2PQ6P474 469 aa8.95□□□□□ -0.98
CTNNA1-238ENST00000523298 ZC3H4Q9UPT8 1303 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-238ENST00000523298 PIK3CDO00329 1044 aa8.94□□□□□ -0.98
CTNNA1-238ENST00000523298 SKOR1P84550 965 aa8.94□□□□□ -0.98
CTNNA1-238ENST00000523298 SH3RF1Q7Z6J0 888 aa8.94□□□□□ -0.98
CTNNA1-238ENST00000523298 SH3BP2P78314 561 aa8.93□□□□□ -0.98
CTNNA1-238ENST00000523298 WWC1Q8IX03 1113 aa8.93□□□□□ -0.98
CTNNA1-238ENST00000523298 CFAP70Q5T0N1 1121 aa8.92□□□□□ -0.98
CTNNA1-238ENST00000523298 LIAT1Q6ZQX7 453 aa8.92□□□□□ -0.98
CTNNA1-238ENST00000523298 ANKLE1Q8NAG6 615 aa8.92□□□□□ -0.98
CTNNA1-238ENST00000523298 ZNF511Q8NB15 262 aa8.92□□□□□ -0.98
CTNNA1-238ENST00000523298 ADAM32Q8TC27 787 aa8.92□□□□□ -0.98
CTNNA1-238ENST00000523298 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-238ENST00000523298 FAM174AQ8TBP5 190 aa8.91□□□□□ -0.98
CTNNA1-238ENST00000523298 CCDC97Q96F63 343 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-238ENST00000523298 CARD14Q9BXL6 1004 aa8.91□□□□□ -0.98
CTNNA1-238ENST00000523298 SERPINA10Q9UK55 444 aa8.91□□□□□ -0.98
CTNNA1-238ENST00000523298 NBPF14Q5TI25 921 aa8.9□□□□□ -0.98
CTNNA1-238ENST00000523298 TBC1D9Q6ZT07 1266 aa8.9□□□□□ -0.98
CTNNA1-238ENST00000523298 ARMC2Q8NEN0 867 aa8.9□□□□□ -0.98
CTNNA1-238ENST00000523298 GPKOWQ92917 476 aaPredicted RBP eCLIP8.9□□□□□ -0.98
CTNNA1-238ENST00000523298 ARHGAP9Q9BRR9 750 aa8.9□□□□□ -0.98
CTNNA1-238ENST00000523298 SRPK2P78362 688 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-238ENST00000523298 PTK2Q05397 1052 aa8.89□□□□□ -0.99
CTNNA1-238ENST00000523298 TRIM32Q13049 653 aa8.89□□□□□ -0.99
CTNNA1-238ENST00000523298 PNMA1Q8ND90 353 aa8.89□□□□□ -0.99
CTNNA1-238ENST00000523298 ARXQ96QS3 562 aa8.89□□□□□ -0.99
CTNNA1-238ENST00000523298 GPSM3Q9Y4H4 160 aa8.89□□□□□ -0.99
CTNNA1-238ENST00000523298 MAGEB6P1A0A0J9YX57 407 aa8.88□□□□□ -0.99
CTNNA1-238ENST00000523298 PALM3A6NDB9 673 aaPredicted RBP8.88□□□□□ -0.99
CTNNA1-238ENST00000523298 TSGA10IPQ3SY00 556 aa8.88□□□□□ -0.99
CTNNA1-238ENST00000523298 ERFEQ4G0M1 354 aa8.88□□□□□ -0.99
CTNNA1-238ENST00000523298 C1QTNF2Q9BXJ5 285 aa8.88□□□□□ -0.99
CTNNA1-238ENST00000523298 PPP1R12CQ9BZL4 782 aa8.88□□□□□ -0.99
CTNNA1-238ENST00000523298 EIF4G2P78344 907 aaKnown RBP eCLIP8.87□□□□□ -0.99
CTNNA1-238ENST00000523298 SEMA3FQ13275 785 aa8.87□□□□□ -0.99
CTNNA1-238ENST00000523298 PHTF2Q8N3S3 785 aa8.87□□□□□ -0.99
CTNNA1-238ENST00000523298 TFIP11Q9UBB9 837 aaKnown RBP8.87□□□□□ -0.99
CTNNA1-238ENST00000523298 PCDHB9Q9Y5E1 797 aa8.87□□□□□ -0.99
CTNNA1-238ENST00000523298 RFX1P22670 979 aa8.86□□□□□ -0.99
CTNNA1-238ENST00000523298 SOX11P35716 441 aa8.86□□□□□ -0.99
CTNNA1-238ENST00000523298 CEP126Q9P2H0 1117 aa8.86□□□□□ -0.99
CTNNA1-238ENST00000523298 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.85□□□□□ -0.99
CTNNA1-238ENST00000523298 IFFO2Q5TF58 517 aa8.85□□□□□ -0.99
CTNNA1-238ENST00000523298 ZBTB33Q86T24 672 aa8.84□□□□□ -0.99
CTNNA1-238ENST00000523298 MAFBQ9Y5Q3 323 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-238ENST00000523298 BPHLQ86WA6 291 aaPredicted RBP8.83□□□□□ -1
CTNNA1-238ENST00000523298 HOMEZQ8IX15 550 aa8.83□□□□□ -1
CTNNA1-238ENST00000523298 PLA2G2EQ9NZK7 142 aa8.83□□□□□ -1
CTNNA1-238ENST00000523298 GIGYF1O75420 1035 aaPredicted RBP8.82□□□□□ -1
CTNNA1-238ENST00000523298 LMOD1P29536 600 aaPredicted RBP8.82□□□□□ -1
CTNNA1-238ENST00000523298 GGCXP38435 758 aa8.82□□□□□ -1
CTNNA1-238ENST00000523298 RPIAP49247 311 aa8.82□□□□□ -1
CTNNA1-238ENST00000523298 AGERQ15109 404 aa8.82□□□□□ -1
CTNNA1-238ENST00000523298 CDCA8Q53HL2 280 aa8.82□□□□□ -1
CTNNA1-238ENST00000523298 CCDC85AQ96PX6 553 aaPredicted RBP8.82□□□□□ -1
CTNNA1-238ENST00000523298 CHIC2Q9UKJ5 165 aa8.82□□□□□ -1
CTNNA1-238ENST00000523298 A0A0G2JS52 829 aa8.81□□□□□ -1
CTNNA1-238ENST00000523298 ZBTB24O43167 697 aaPredicted RBP8.81□□□□□ -1
CTNNA1-238ENST00000523298 ATP9BO43861 1147 aa8.81□□□□□ -1
CTNNA1-238ENST00000523298 DEPDC4Q8N2C3 294 aa8.81□□□□□ -1
CTNNA1-238ENST00000523298 WNT7BP56706 349 aa8.8□□□□□ -1
CTNNA1-238ENST00000523298 RC3H1Q5TC82 1133 aaKnown RBP8.8□□□□□ -1
CTNNA1-238ENST00000523298 TRMT44Q8IYL2 757 aaKnown RBP8.8□□□□□ -1
CTNNA1-238ENST00000523298 SIAH2O43255 324 aa8.79□□□□□ -1
CTNNA1-238ENST00000523298 SKIP12755 728 aa8.79□□□□□ -1
CTNNA1-238ENST00000523298 KANK4Q5T7N3 995 aaPredicted RBP8.79□□□□□ -1
CTNNA1-238ENST00000523298 TRAF7Q6Q0C0 670 aa8.79□□□□□ -1
CTNNA1-238ENST00000523298 DZIP3Q86Y13 1208 aaKnown RBP8.79□□□□□ -1
CTNNA1-238ENST00000523298 CDCA7Q9BWT1 371 aaPredicted RBP8.79□□□□□ -1
CTNNA1-238ENST00000523298 CARNS1A5YM72 827 aa8.78□□□□□ -1
CTNNA1-238ENST00000523298 USP17L5A8MUK1 530 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms