RNA–Protein interactions for RNA: ENST00000523270.1

CNOT8-223, Transcript of CCR4-NOT transcription complex subunit 8, human

TSL 4

Gene CNOT8, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT8-223	ENST00000523270	PLCH1	Q4KWH8	1693 aa		29.12	■■■□□ 2.25
CNOT8-223	ENST00000523270	BCL9L	Q86UU0	1499 aa		29.12	■■■□□ 2.25
CNOT8-223	ENST00000523270	USP21	Q9UK80	565 aa		29.12	■■■□□ 2.25
CNOT8-223	ENST00000523270	QTRT2	Q9H974	415 aa	Known RBP	29.11	■■■□□ 2.25
CNOT8-223	ENST00000523270	PHRF1	Q9P1Y6	1649 aa	Known RBP	29.1	■■■□□ 2.25
CNOT8-223	ENST00000523270	AKAP12	Q02952	1782 aa		29.1	■■■□□ 2.25
CNOT8-223	ENST00000523270	SLIT2	O94813	1529 aa		29.1	■■■□□ 2.25
CNOT8-223	ENST00000523270	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	29.09	■■■□□ 2.25
CNOT8-223	ENST00000523270	HAP1	P54257	671 aa	Predicted RBP	29.09	■■■□□ 2.25
CNOT8-223	ENST00000523270	ATRN	O75882	1429 aa		29.09	■■■□□ 2.25
CNOT8-223	ENST00000523270	RXRB	P28702	533 aa		29.08	■■■□□ 2.25
CNOT8-223	ENST00000523270	NUTM2G	Q5VZR2	741 aa		29.08	■■■□□ 2.25
CNOT8-223	ENST00000523270	TIMELESS	Q9UNS1	1208 aa		29.07	■■■□□ 2.24
CNOT8-223	ENST00000523270	USP6	P35125	1406 aa		29.06	■■■□□ 2.24
CNOT8-223	ENST00000523270	ST20-MTHFS	A0A0A6YYL1	179 aa		29.06	■■■□□ 2.24
CNOT8-223	ENST00000523270	TESK2	Q96S53	571 aa		29.05	■■■□□ 2.24
CNOT8-223	ENST00000523270	ATAD2	Q6PL18	1390 aa		29.04	■■■□□ 2.24
CNOT8-223	ENST00000523270	RGS12	O14924	1447 aa		29.03	■■■□□ 2.24
CNOT8-223	ENST00000523270	NWD2	Q9ULI1	1742 aa		29.03	■■■□□ 2.24
CNOT8-223	ENST00000523270	USP47	Q96K76	1375 aa		29.03	■■■□□ 2.24
CNOT8-223	ENST00000523270	CDK12	Q9NYV4	1490 aa	Predicted RBP	29.03	■■■□□ 2.24
CNOT8-223	ENST00000523270	NRK	Q7Z2Y5	1582 aa		29.02	■■■□□ 2.24
CNOT8-223	ENST00000523270	RBM6	P78332	1123 aa	Known RBP	29.02	■■■□□ 2.24
CNOT8-223	ENST00000523270	TRPC5	Q9UL62	973 aa	Predicted RBP	29.02	■■■□□ 2.24
CNOT8-223	ENST00000523270	NRAP	Q86VF7	1730 aa		29.02	■■■□□ 2.24
CNOT8-223	ENST00000523270	SSH2	Q76I76	1423 aa		29.02	■■■□□ 2.24
CNOT8-223	ENST00000523270	FAM83G	A6ND36	823 aa		29.01	■■■□□ 2.23
CNOT8-223	ENST00000523270	PIK3C2A	O00443	1686 aa		29.01	■■■□□ 2.23
CNOT8-223	ENST00000523270	COL14A1	Q05707	1796 aa	Known RBP	29	■■■□□ 2.23
CNOT8-223	ENST00000523270	MON2	Q7Z3U7	1717 aa		29	■■■□□ 2.23
CNOT8-223	ENST00000523270	CD163L1	Q9NR16	1453 aa		28.98	■■■□□ 2.23
CNOT8-223	ENST00000523270	CPSF1	Q10570	1443 aa	Known RBP	28.98	■■■□□ 2.23
CNOT8-223	ENST00000523270	UNC5CL	Q8IV45	518 aa		28.98	■■■□□ 2.23
CNOT8-223	ENST00000523270	ABTB2	Q8N961	1025 aa		28.98	■■■□□ 2.23
CNOT8-223	ENST00000523270	GLI3	P10071	1580 aa		28.97	■■■□□ 2.23
CNOT8-223	ENST00000523270	BRD4	O60885	1362 aa	Predicted RBP	28.97	■■■□□ 2.23
CNOT8-223	ENST00000523270	USP19	O94966	1318 aa		28.96	■■■□□ 2.23
CNOT8-223	ENST00000523270	KIAA0232	Q92628	1395 aa		28.94	■■■□□ 2.22
CNOT8-223	ENST00000523270	TTC21B	Q7Z4L5	1316 aa		28.92	■■■□□ 2.22
CNOT8-223	ENST00000523270	KTN1	Q86UP2	1357 aa	Known RBP	28.91	■■■□□ 2.22
CNOT8-223	ENST00000523270	GJD4	Q96KN9	370 aa	Predicted RBP	28.91	■■■□□ 2.22
CNOT8-223	ENST00000523270	SLC12A5	Q9H2X9	1139 aa		28.91	■■■□□ 2.22
CNOT8-223	ENST00000523270	ZC3H6	P61129	1189 aa	Known RBP	28.9	■■■□□ 2.22
CNOT8-223	ENST00000523270	TMC1	Q8TDI8	760 aa		28.9	■■■□□ 2.22
CNOT8-223	ENST00000523270	PRDM11	Q9NQV5	511 aa		28.9	■■■□□ 2.22
CNOT8-223	ENST00000523270	BTG4	Q9NY30	223 aa		28.9	■■■□□ 2.22
CNOT8-223	ENST00000523270	SLIT3	O75094	1523 aa		28.89	■■■□□ 2.22
CNOT8-223	ENST00000523270	CHRNA2	Q15822	529 aa		28.89	■■■□□ 2.22
CNOT8-223	ENST00000523270	ZNF692	Q9BU19	519 aa	Predicted RBP	28.89	■■■□□ 2.22
CNOT8-223	ENST00000523270	NLRP13	Q86W25	1043 aa		28.88	■■■□□ 2.21
CNOT8-223	ENST00000523270	NLRP6	P59044	892 aa		28.87	■■■□□ 2.21
CNOT8-223	ENST00000523270	VPS72	Q15906	364 aa		28.87	■■■□□ 2.21
CNOT8-223	ENST00000523270	PUS7	Q96PZ0	661 aa	Known RBP	28.87	■■■□□ 2.21
CNOT8-223	ENST00000523270	LMO7	Q8WWI1	1683 aa		28.86	■■■□□ 2.21
CNOT8-223	ENST00000523270		A0A1W2PP64	1363 aa		28.86	■■■□□ 2.21
CNOT8-223	ENST00000523270	GC	P02774	474 aa		28.84	■■■□□ 2.21
CNOT8-223	ENST00000523270	TTC21A	Q8NDW8	1320 aa		28.83	■■■□□ 2.21
CNOT8-223	ENST00000523270	CPD	O75976	1380 aa		28.83	■■■□□ 2.21
CNOT8-223	ENST00000523270	BRWD3	Q6RI45	1802 aa		28.83	■■■□□ 2.21
CNOT8-223	ENST00000523270	ZRANB1	Q9UGI0	708 aa		28.82	■■■□□ 2.2
CNOT8-223	ENST00000523270	USP54	Q70EL1	1684 aa		28.82	■■■□□ 2.2
CNOT8-223	ENST00000523270	CAMTA1	Q9Y6Y1	1673 aa		28.81	■■■□□ 2.2
CNOT8-223	ENST00000523270	TMF1	P82094	1093 aa		28.81	■■■□□ 2.2
CNOT8-223	ENST00000523270	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	28.81	■■■□□ 2.2
CNOT8-223	ENST00000523270	CCDC9	Q9Y3X0	531 aa	Known RBP	28.81	■■■□□ 2.2
CNOT8-223	ENST00000523270	MYOM1	P52179	1685 aa		28.8	■■■□□ 2.2
CNOT8-223	ENST00000523270	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	28.79	■■■□□ 2.2
CNOT8-223	ENST00000523270	EDC4	Q6P2E9	1401 aa	Known RBP	28.78	■■■□□ 2.2
CNOT8-223	ENST00000523270	COL18A1	P39060	1754 aa		28.78	■■■□□ 2.2
CNOT8-223	ENST00000523270	NME9	Q86XW9	330 aa		28.78	■■■□□ 2.2
CNOT8-223	ENST00000523270	NFAT5	O94916	1531 aa		28.78	■■■□□ 2.2
CNOT8-223	ENST00000523270	NINL	Q9Y2I6	1382 aa		28.77	■■■□□ 2.2
CNOT8-223	ENST00000523270	SLC24A1	O60721	1099 aa		28.77	■■■□□ 2.2
CNOT8-223	ENST00000523270	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.76	■■■□□ 2.19
CNOT8-223	ENST00000523270	TERF2IP	Q9NYB0	399 aa		28.76	■■■□□ 2.19
CNOT8-223	ENST00000523270	STRN4	Q9NRL3	753 aa		28.75	■■■□□ 2.19
CNOT8-223	ENST00000523270	USP31	Q70CQ4	1352 aa		28.75	■■■□□ 2.19
CNOT8-223	ENST00000523270	SPATA31A5	Q5VU36	1347 aa		28.74	■■■□□ 2.19
CNOT8-223	ENST00000523270	SPATA31A7	Q8IWB4	1347 aa		28.74	■■■□□ 2.19
CNOT8-223	ENST00000523270	ZBTB7C	A1YPR0	619 aa		28.74	■■■□□ 2.19
CNOT8-223	ENST00000523270	RGPD5	Q99666	1765 aa		28.73	■■■□□ 2.19
CNOT8-223	ENST00000523270	SOX12	O15370	315 aa		28.73	■■■□□ 2.19
CNOT8-223	ENST00000523270	HSPA5	P11021	654 aa	Known RBP	28.72	■■■□□ 2.19
CNOT8-223	ENST00000523270	SEPT12	Q8IYM1	358 aa		28.72	■■■□□ 2.19
CNOT8-223	ENST00000523270	ANKRD36B	Q8N2N9	1353 aa		28.71	■■■□□ 2.19
CNOT8-223	ENST00000523270	COL5A2	P05997	1499 aa	Predicted RBP	28.71	■■■□□ 2.19
CNOT8-223	ENST00000523270	THSD7A	Q9UPZ6	1657 aa		28.7	■■■□□ 2.19
CNOT8-223	ENST00000523270	ONECUT3	O60422	494 aa	Predicted RBP	28.7	■■■□□ 2.18
CNOT8-223	ENST00000523270	FAM98C	Q17RN3	349 aa	Known RBP	28.7	■■■□□ 2.18
CNOT8-223	ENST00000523270	AATK	Q6ZMQ8	1374 aa		28.69	■■■□□ 2.18
CNOT8-223	ENST00000523270	OVOS2	A0A0J9YW53	1432 aa		28.69	■■■□□ 2.18
CNOT8-223	ENST00000523270	OVOS2	Q6IE36	1432 aa		28.69	■■■□□ 2.18
CNOT8-223	ENST00000523270	EIF4G2	P78344	907 aa	Known RBP eCLIP	28.68	■■■□□ 2.18
CNOT8-223	ENST00000523270	LARP1	Q6PKG0	1096 aa	Known RBP	28.68	■■■□□ 2.18
CNOT8-223	ENST00000523270	SPATA31A1	Q5TZJ5	1347 aa		28.68	■■■□□ 2.18
CNOT8-223	ENST00000523270	LTN1	O94822	1766 aa		28.67	■■■□□ 2.18
CNOT8-223	ENST00000523270	ARHGEF25	Q86VW2	580 aa		28.67	■■■□□ 2.18
CNOT8-223	ENST00000523270	EP400	Q96L91	3159 aa		28.67	■■■□□ 2.18
CNOT8-223	ENST00000523270	CDCA8	Q53HL2	280 aa		28.66	■■■□□ 2.18
CNOT8-223	ENST00000523270	KCNH5	Q8NCM2	988 aa		28.66	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms