RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 SMARCA4P51532 1647 aa11.24□□□□□ -0.61
PCM1-216ENST00000522777 PTPRNQ16849 979 aa11.24□□□□□ -0.61
PCM1-216ENST00000522777 POTEMA6NI47 508 aa11.23□□□□□ -0.61
PCM1-216ENST00000522777 HDGFL1Q5TGJ6 251 aa11.23□□□□□ -0.61
PCM1-216ENST00000522777 FAM160A2Q8N612 972 aaPredicted RBP11.23□□□□□ -0.61
PCM1-216ENST00000522777 KCTD12Q96CX2 325 aaKnown RBP11.23□□□□□ -0.61
PCM1-216ENST00000522777 ALG2Q9H553 416 aa11.23□□□□□ -0.61
PCM1-216ENST00000522777 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
PCM1-216ENST00000522777 COPS2P61201 443 aa11.22□□□□□ -0.61
PCM1-216ENST00000522777 MAP10Q9P2G4 905 aa11.22□□□□□ -0.61
PCM1-216ENST00000522777 SPSB2Q99619 263 aa11.21□□□□□ -0.61
PCM1-216ENST00000522777 PRDM9Q9NQV7 894 aa11.21□□□□□ -0.61
PCM1-216ENST00000522777 MMP16P51512 607 aa11.2□□□□□ -0.62
PCM1-216ENST00000522777 NYAP1Q6ZVC0 841 aa11.2□□□□□ -0.62
PCM1-216ENST00000522777 FKBPLQ9UIM3 349 aa11.2□□□□□ -0.62
PCM1-216ENST00000522777 TLL1O43897 1013 aa11.19□□□□□ -0.62
PCM1-216ENST00000522777 KIF21AQ7Z4S6 1674 aa11.19□□□□□ -0.62
PCM1-216ENST00000522777 PNMA1Q8ND90 353 aa11.18□□□□□ -0.62
PCM1-216ENST00000522777 UCN2Q96RP3 112 aa11.18□□□□□ -0.62
PCM1-216ENST00000522777 ZC3H4Q9UPT8 1303 aaKnown RBP11.17□□□□□ -0.62
PCM1-216ENST00000522777 CCNYL3P0C7X3 344 aa11.17□□□□□ -0.62
PCM1-216ENST00000522777 SOX11P35716 441 aa11.17□□□□□ -0.62
PCM1-216ENST00000522777 MTRQ99707 1265 aa11.17□□□□□ -0.62
PCM1-216ENST00000522777 MRC2Q9UBG0 1479 aa11.17□□□□□ -0.62
PCM1-216ENST00000522777 BAZ1AQ9NRL2 1556 aaPredicted RBP11.16□□□□□ -0.62
PCM1-216ENST00000522777 ZPR1O75312 459 aa11.16□□□□□ -0.62
PCM1-216ENST00000522777 FBXO45P0C2W1 286 aa11.16□□□□□ -0.62
PCM1-216ENST00000522777 NR1H3Q13133 447 aa11.16□□□□□ -0.62
PCM1-216ENST00000522777 CFAP70Q5T0N1 1121 aa11.16□□□□□ -0.62
PCM1-216ENST00000522777 ADH1BP00325 375 aa11.15□□□□□ -0.62
PCM1-216ENST00000522777 NUDT12Q9BQG2 462 aa11.15□□□□□ -0.62
PCM1-216ENST00000522777 EVA1BQ9NVM1 165 aa11.15□□□□□ -0.62
PCM1-216ENST00000522777 CADPSQ9ULU8 1353 aa11.15□□□□□ -0.63
PCM1-216ENST00000522777 TJAP1Q5JTD0 557 aa11.14□□□□□ -0.63
PCM1-216ENST00000522777 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
PCM1-216ENST00000522777 PPP1R12CQ9BZL4 782 aa11.14□□□□□ -0.63
PCM1-216ENST00000522777 PEG3Q9GZU2 1588 aa11.13□□□□□ -0.63
PCM1-216ENST00000522777 ZBBXA8MT70 800 aa11.13□□□□□ -0.63
PCM1-216ENST00000522777 PPP1R15AO75807 674 aaPredicted RBP11.13□□□□□ -0.63
PCM1-216ENST00000522777 CTHP32929 405 aa11.13□□□□□ -0.63
PCM1-216ENST00000522777 KCNH2Q12809 1159 aa11.13□□□□□ -0.63
PCM1-216ENST00000522777 POTEGQ6S5H5 508 aa11.12□□□□□ -0.63
PCM1-216ENST00000522777 WDR62O43379 1518 aa11.12□□□□□ -0.63
PCM1-216ENST00000522777 PALM3A6NDB9 673 aaPredicted RBP11.11□□□□□ -0.63
PCM1-216ENST00000522777 EIF4G2P78344 907 aaKnown RBP eCLIP11.11□□□□□ -0.63
PCM1-216ENST00000522777 SRPK2P78362 688 aaKnown RBP11.11□□□□□ -0.63
PCM1-216ENST00000522777 SEMA3FQ13275 785 aa11.11□□□□□ -0.63
PCM1-216ENST00000522777 RETREG2Q8NC44 543 aa11.11□□□□□ -0.63
PCM1-216ENST00000522777 ZNF516Q92618 1163 aa11.11□□□□□ -0.63
PCM1-216ENST00000522777 OCSTAMPQ9BR26 566 aa11.11□□□□□ -0.63
PCM1-216ENST00000522777 IL21Q9HBE4 155 aa11.11□□□□□ -0.63
PCM1-216ENST00000522777 PTPN5P54829 565 aa11.1□□□□□ -0.63
PCM1-216ENST00000522777 PBXIP1Q96AQ6 731 aa11.1□□□□□ -0.63
PCM1-216ENST00000522777 MYT1LQ9UL68 1186 aa11.1□□□□□ -0.63
PCM1-216ENST00000522777 PDIA4P13667 645 aaKnown RBP11.09□□□□□ -0.63
PCM1-216ENST00000522777 TRIM26Q12899 539 aaPredicted RBP11.09□□□□□ -0.63
PCM1-216ENST00000522777 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.08□□□□□ -0.64
PCM1-216ENST00000522777 GPKOWQ92917 476 aaPredicted RBP eCLIP11.08□□□□□ -0.64
PCM1-216ENST00000522777 PDXDC2PQ6P474 469 aa11.07□□□□□ -0.64
PCM1-216ENST00000522777 ARMC2Q8NEN0 867 aa11.07□□□□□ -0.64
PCM1-216ENST00000522777 TRAIPQ9BWF2 469 aa11.07□□□□□ -0.64
PCM1-216ENST00000522777 SLC6A16Q9GZN6 736 aa11.07□□□□□ -0.64
PCM1-216ENST00000522777 GPSM3Q9Y4H4 160 aa11.07□□□□□ -0.64
PCM1-216ENST00000522777 RFX1P22670 979 aa11.06□□□□□ -0.64
PCM1-216ENST00000522777 PTCRAQ6ISU1 281 aaPredicted RBP11.06□□□□□ -0.64
PCM1-216ENST00000522777 TBC1D9Q6ZT07 1266 aa11.06□□□□□ -0.64
PCM1-216ENST00000522777 TFIP11Q9UBB9 837 aaKnown RBP11.06□□□□□ -0.64
PCM1-216ENST00000522777 MAFBQ9Y5Q3 323 aaPredicted RBP11.06□□□□□ -0.64
PCM1-216ENST00000522777 NBPF14Q5TI25 921 aa11.05□□□□□ -0.64
PCM1-216ENST00000522777 UNC93B1Q9H1C4 597 aa11.05□□□□□ -0.64
PCM1-216ENST00000522777 CEP164Q9UPV0 1460 aa11.05□□□□□ -0.64
PCM1-216ENST00000522777 MROH2BQ7Z745 1585 aa11.04□□□□□ -0.64
PCM1-216ENST00000522777 PIK3CDO00329 1044 aa11.04□□□□□ -0.64
PCM1-216ENST00000522777 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
PCM1-216ENST00000522777 NKX2-3Q8TAU0 364 aa11.04□□□□□ -0.64
PCM1-216ENST00000522777 PTK2Q05397 1052 aa11.03□□□□□ -0.64
PCM1-216ENST00000522777 ATP9BO43861 1147 aa11.02□□□□□ -0.65
PCM1-216ENST00000522777 S1PR4O95977 384 aa11.02□□□□□ -0.65
PCM1-216ENST00000522777 SH3BP5LQ7L8J4 393 aa11.02□□□□□ -0.65
PCM1-216ENST00000522777 CCDC24Q8N4L8 307 aa11.01□□□□□ -0.65
PCM1-216ENST00000522777 RIMBP3CA6NJZ7 1639 aa11.01□□□□□ -0.65
PCM1-216ENST00000522777 RIMBP3BA6NNM3 1639 aa11.01□□□□□ -0.65
PCM1-216ENST00000522777 RIMBP3Q9UFD9 1639 aa11.01□□□□□ -0.65
PCM1-216ENST00000522777 FANCD2Q9BXW9 1451 aa11□□□□□ -0.65
PCM1-216ENST00000522777 NFATC2IPQ8NCF5 419 aa11□□□□□ -0.65
PCM1-216ENST00000522777 FAM174AQ8TBP5 190 aa11□□□□□ -0.65
PCM1-216ENST00000522777 ADAM32Q8TC27 787 aa10.99□□□□□ -0.65
PCM1-216ENST00000522777 PODXL2Q9NZ53 605 aa10.99□□□□□ -0.65
PCM1-216ENST00000522777 SH3RF1Q7Z6J0 888 aa10.98□□□□□ -0.65
PCM1-216ENST00000522777 ARHGAP9Q9BRR9 750 aa10.98□□□□□ -0.65
PCM1-216ENST00000522777 FCF1Q9Y324 198 aaKnown RBP10.98□□□□□ -0.65
PCM1-216ENST00000522777 ACIN1Q9UKV3 1341 aaKnown RBP10.98□□□□□ -0.65
PCM1-216ENST00000522777 CYB5RLQ6IPT4 315 aa10.97□□□□□ -0.65
PCM1-216ENST00000522777 PCDHB9Q9Y5E1 797 aa10.97□□□□□ -0.65
PCM1-216ENST00000522777 ARHGEF11O15085 1522 aa10.96□□□□□ -0.65
PCM1-216ENST00000522777 PHTF2Q8N3S3 785 aa10.96□□□□□ -0.65
PCM1-216ENST00000522777 CEP126Q9P2H0 1117 aa10.96□□□□□ -0.65
PCM1-216ENST00000522777 ATG7O95352 703 aa10.95□□□□□ -0.66
PCM1-216ENST00000522777 ITGBL1O95965 494 aaPredicted RBP10.95□□□□□ -0.66
PCM1-216ENST00000522777 MCCD1P59942 119 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms