RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 HRCP23327 699 aa18.21■□□□□ 0.51
BRF2-204ENST00000522539 WASLO00401 505 aaPredicted RBP18.2■□□□□ 0.5
BRF2-204ENST00000522539 HIRIP3Q9BW71 556 aaPredicted RBP18.2■□□□□ 0.5
BRF2-204ENST00000522539 TRAK1Q9UPV9 953 aa18.2■□□□□ 0.5
BRF2-204ENST00000522539 RGPD1P0DJD0 1748 aa18.2■□□□□ 0.5
BRF2-204ENST00000522539 MINK1Q8N4C8 1332 aaPredicted RBP18.19■□□□□ 0.5
BRF2-204ENST00000522539 A0A0G2JS52 829 aa18.17■□□□□ 0.5
BRF2-204ENST00000522539 PSDA5PKW4 1024 aaPredicted RBP18.17■□□□□ 0.5
BRF2-204ENST00000522539 MYT1Q01538 1121 aa18.17■□□□□ 0.5
BRF2-204ENST00000522539 EN1Q05925 392 aaPredicted RBP18.17■□□□□ 0.5
BRF2-204ENST00000522539 STAC3Q96MF2 364 aa18.17■□□□□ 0.5
BRF2-204ENST00000522539 ATP7BP35670 1465 aa18.16■□□□□ 0.5
BRF2-204ENST00000522539 TNS1Q9HBL0 1735 aaKnown RBP18.16■□□□□ 0.5
BRF2-204ENST00000522539 RAB3GAP2Q9H2M9 1393 aa18.16■□□□□ 0.5
BRF2-204ENST00000522539 NGDNQ8NEJ9 315 aaKnown RBP18.15■□□□□ 0.5
BRF2-204ENST00000522539 SPATA31A1Q5TZJ5 1347 aa18.15■□□□□ 0.5
BRF2-204ENST00000522539 FAM182BQ5T319 152 aa18.14■□□□□ 0.49
BRF2-204ENST00000522539 PRDM11Q9NQV5 511 aa18.14■□□□□ 0.49
BRF2-204ENST00000522539 KIAA0232Q92628 1395 aa18.13■□□□□ 0.49
BRF2-204ENST00000522539 ITSN1Q15811 1721 aa18.12■□□□□ 0.49
BRF2-204ENST00000522539 ARHGEF28Q8N1W1 1705 aaKnown RBP18.12■□□□□ 0.49
BRF2-204ENST00000522539 DCAF11Q8TEB1 546 aa18.12■□□□□ 0.49
BRF2-204ENST00000522539 PHRF1Q9P1Y6 1649 aaKnown RBP18.12■□□□□ 0.49
BRF2-204ENST00000522539 NUDT16Q96DE0 195 aaKnown RBP18.11■□□□□ 0.49
BRF2-204ENST00000522539 CAMKK2Q96RR4 588 aa18.11■□□□□ 0.49
BRF2-204ENST00000522539 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
BRF2-204ENST00000522539 PAK3O75914 559 aaPredicted RBP18.1■□□□□ 0.49
BRF2-204ENST00000522539 R3HDM1Q15032 1099 aaKnown RBP18.1■□□□□ 0.49
BRF2-204ENST00000522539 KDM2AQ9Y2K7 1162 aa18.1■□□□□ 0.49
BRF2-204ENST00000522539 PARD3Q8TEW0 1356 aa18.09■□□□□ 0.49
BRF2-204ENST00000522539 EZH2Q15910 746 aaKnown RBP18.09■□□□□ 0.49
BRF2-204ENST00000522539 FAM196AQ6ZSG2 479 aa18.09■□□□□ 0.49
BRF2-204ENST00000522539 BARGINQ6ZT62 677 aa18.08■□□□□ 0.48
BRF2-204ENST00000522539 TOPAZ1Q8N9V7 1692 aa18.08■□□□□ 0.48
BRF2-204ENST00000522539 CHRNA2Q15822 529 aa18.07■□□□□ 0.48
BRF2-204ENST00000522539 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
BRF2-204ENST00000522539 CPDO75976 1380 aa18.05■□□□□ 0.48
BRF2-204ENST00000522539 NRKQ7Z2Y5 1582 aa18.05■□□□□ 0.48
BRF2-204ENST00000522539 PLEKHG3A1L390 1219 aa18.05■□□□□ 0.48
BRF2-204ENST00000522539 TRIM37O94972 964 aa18.05■□□□□ 0.48
BRF2-204ENST00000522539 CDK19Q9BWU1 502 aa18.05■□□□□ 0.48
BRF2-204ENST00000522539 LMO7Q8WWI1 1683 aa18.05■□□□□ 0.48
BRF2-204ENST00000522539 USP19O94966 1318 aa18.04■□□□□ 0.48
BRF2-204ENST00000522539 ACEP12821 1306 aa18.04■□□□□ 0.48
BRF2-204ENST00000522539 RREB1Q92766 1687 aa18.04■□□□□ 0.48
BRF2-204ENST00000522539 CAMTA1Q9Y6Y1 1673 aa18.04■□□□□ 0.48
BRF2-204ENST00000522539 ZC3H6P61129 1189 aaKnown RBP18.04■□□□□ 0.48
BRF2-204ENST00000522539 NBPF8Q3BBV2 869 aa18.04■□□□□ 0.48
BRF2-204ENST00000522539 STRN4Q9NRL3 753 aa18.04■□□□□ 0.48
BRF2-204ENST00000522539 CCDC61Q9Y6R9 512 aa18.04■□□□□ 0.48
BRF2-204ENST00000522539 NUTM2GQ5VZR2 741 aa18.02■□□□□ 0.48
BRF2-204ENST00000522539 APBA3O96018 575 aa18.01■□□□□ 0.47
BRF2-204ENST00000522539 KIAA1210Q9ULL0 1709 aa18.01■□□□□ 0.47
BRF2-204ENST00000522539 LARP1Q6PKG0 1096 aaKnown RBP18■□□□□ 0.47
BRF2-204ENST00000522539 TCP11L2Q8N4U5 519 aa18■□□□□ 0.47
BRF2-204ENST00000522539 NUP188Q5SRE5 1749 aa18■□□□□ 0.47
BRF2-204ENST00000522539 PDE3BQ13370 1112 aa17.99■□□□□ 0.47
BRF2-204ENST00000522539 USP35Q9P2H5 1018 aa17.99■□□□□ 0.47
BRF2-204ENST00000522539 THRAP3Q9Y2W1 955 aaKnown RBP17.99■□□□□ 0.47
BRF2-204ENST00000522539 EVA1CP58658 441 aa17.98■□□□□ 0.47
BRF2-204ENST00000522539 ABTB2Q8N961 1025 aa17.98■□□□□ 0.47
BRF2-204ENST00000522539 PARP4Q9UKK3 1724 aaKnown RBP17.97■□□□□ 0.47
BRF2-204ENST00000522539 COL5A2P05997 1499 aaPredicted RBP17.96■□□□□ 0.47
BRF2-204ENST00000522539 BRD4O60885 1362 aaPredicted RBP17.96■□□□□ 0.47
BRF2-204ENST00000522539 GCP02774 474 aa17.96■□□□□ 0.47
BRF2-204ENST00000522539 NLRP13Q86W25 1043 aa17.95■□□□□ 0.46
BRF2-204ENST00000522539 C11orf95C9JLR9 678 aaPredicted RBP17.94■□□□□ 0.46
BRF2-204ENST00000522539 PEAK1Q9H792 1746 aa17.94■□□□□ 0.46
BRF2-204ENST00000522539 CRB1P82279 1406 aa17.93■□□□□ 0.46
BRF2-204ENST00000522539 PPIP5K1Q6PFW1 1433 aa17.93■□□□□ 0.46
BRF2-204ENST00000522539 NBPF1Q3BBV0 1214 aa17.93■□□□□ 0.46
BRF2-204ENST00000522539 NBPF14Q5TI25 921 aa17.93■□□□□ 0.46
BRF2-204ENST00000522539 SLIT3O75094 1523 aa17.92■□□□□ 0.46
BRF2-204ENST00000522539 AATKQ6ZMQ8 1374 aa17.91■□□□□ 0.46
BRF2-204ENST00000522539 RGPD3A6NKT7 1758 aaPredicted RBP17.91■□□□□ 0.46
BRF2-204ENST00000522539 RGPD4Q7Z3J3 1758 aa17.91■□□□□ 0.46
BRF2-204ENST00000522539 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.46
BRF2-204ENST00000522539 OVOS2A0A0J9YW53 1432 aa17.89■□□□□ 0.46
BRF2-204ENST00000522539 USP6P35125 1406 aa17.89■□□□□ 0.46
BRF2-204ENST00000522539 OVOS2Q6IE36 1432 aa17.89■□□□□ 0.46
BRF2-204ENST00000522539 PLSCR1O15162 318 aa17.89■□□□□ 0.45
BRF2-204ENST00000522539 CENPJQ9HC77 1338 aaPredicted RBP17.89■□□□□ 0.45
BRF2-204ENST00000522539 LRRC37A3O60309 1634 aa17.88■□□□□ 0.45
BRF2-204ENST00000522539 SRPK2P78362 688 aaKnown RBP17.88■□□□□ 0.45
BRF2-204ENST00000522539 SPON1Q9HCB6 807 aa17.88■□□□□ 0.45
BRF2-204ENST00000522539 CABP2Q9NPB3 220 aa17.88■□□□□ 0.45
BRF2-204ENST00000522539 COL18A1P39060 1754 aa17.88■□□□□ 0.45
BRF2-204ENST00000522539 BCL9O00512 1426 aa17.88■□□□□ 0.45
BRF2-204ENST00000522539 SBF2Q86WG5 1849 aa17.87■□□□□ 0.45
BRF2-204ENST00000522539 KCNQ2O43526 872 aa17.87■□□□□ 0.45
BRF2-204ENST00000522539 NINLQ9Y2I6 1382 aa17.86■□□□□ 0.45
BRF2-204ENST00000522539 CABP1Q9NZU7 370 aa17.85■□□□□ 0.45
BRF2-204ENST00000522539 PIK3C2AO00443 1686 aa17.84■□□□□ 0.45
BRF2-204ENST00000522539 QRICH2Q9H0J4 1663 aa17.84■□□□□ 0.45
BRF2-204ENST00000522539 YY1P25490 414 aa17.84■□□□□ 0.45
BRF2-204ENST00000522539 NLRP6P59044 892 aa17.84■□□□□ 0.45
BRF2-204ENST00000522539 BCL11BQ9C0K0 894 aaPredicted RBP17.84■□□□□ 0.45
BRF2-204ENST00000522539 CASZ1Q86V15 1759 aa17.84■□□□□ 0.45
BRF2-204ENST00000522539 WDR17Q8IZU2 1322 aa17.83■□□□□ 0.44
BRF2-204ENST00000522539 DDB1Q16531 1140 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms