RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 NBPF1Q3BBV0 1214 aa19.64■□□□□ 0.73
PCDHA3-201ENST00000522353 SLC3A2P08195 630 aaKnown RBP19.64■□□□□ 0.73
PCDHA3-201ENST00000522353 PIP4K2BP78356 416 aa19.64■□□□□ 0.73
PCDHA3-201ENST00000522353 BICD2Q8TD16 824 aa19.64■□□□□ 0.73
PCDHA3-201ENST00000522353 FANCIQ9NVI1 1328 aa19.64■□□□□ 0.73
PCDHA3-201ENST00000522353 PPP1R1BQ9UD71 204 aaPredicted RBP19.64■□□□□ 0.73
PCDHA3-201ENST00000522353 ARAP1Q96P48 1450 aa19.64■□□□□ 0.73
PCDHA3-201ENST00000522353 KIAA0586Q9BVV6 1533 aa19.63■□□□□ 0.73
PCDHA3-201ENST00000522353 PSMA5P28066 241 aa19.63■□□□□ 0.73
PCDHA3-201ENST00000522353 IKQ13123 557 aaPredicted RBP19.63■□□□□ 0.73
PCDHA3-201ENST00000522353 CNNM1Q9NRU3 951 aa19.63■□□□□ 0.73
PCDHA3-201ENST00000522353 PCMTD1Q96MG8 357 aaPredicted RBP19.63■□□□□ 0.73
PCDHA3-201ENST00000522353 VPS37CA5D8V6 355 aaPredicted RBP19.62■□□□□ 0.73
PCDHA3-201ENST00000522353 HIP1O00291 1037 aa19.61■□□□□ 0.73
PCDHA3-201ENST00000522353 HECW1Q76N89 1606 aa19.61■□□□□ 0.73
PCDHA3-201ENST00000522353 ERBINQ96RT1 1412 aa19.61■□□□□ 0.73
PCDHA3-201ENST00000522353 CNKSR2Q8WXI2 1034 aa19.61■□□□□ 0.73
PCDHA3-201ENST00000522353 CDC45O75419 566 aa19.6■□□□□ 0.73
PCDHA3-201ENST00000522353 CCDC158Q5M9N0 1113 aa19.6■□□□□ 0.73
PCDHA3-201ENST00000522353 KCNH5Q8NCM2 988 aa19.6■□□□□ 0.73
PCDHA3-201ENST00000522353 PANK1Q8TE04 598 aa19.6■□□□□ 0.73
PCDHA3-201ENST00000522353 R3HCC1Q9Y3T6 440 aaKnown RBP19.6■□□□□ 0.73
PCDHA3-201ENST00000522353 CCDC61Q9Y6R9 512 aa19.6■□□□□ 0.73
PCDHA3-201ENST00000522353 CCAR1Q8IX12 1150 aaKnown RBP19.59■□□□□ 0.73
PCDHA3-201ENST00000522353 GNAI2P04899 355 aa19.59■□□□□ 0.73
PCDHA3-201ENST00000522353 EXOSC9Q06265 439 aaKnown RBP19.59■□□□□ 0.73
PCDHA3-201ENST00000522353 DNMBPQ6XZF7 1577 aa19.58■□□□□ 0.73
PCDHA3-201ENST00000522353 CD109Q6YHK3 1445 aa19.58■□□□□ 0.73
PCDHA3-201ENST00000522353 CCDC73Q6ZRK6 1079 aa19.58■□□□□ 0.73
PCDHA3-201ENST00000522353 CHMP5Q9NZZ3 219 aa19.58■□□□□ 0.73
PCDHA3-201ENST00000522353 NUCB2P80303 420 aa19.58■□□□□ 0.72
PCDHA3-201ENST00000522353 PRXQ9BXM0 1461 aa19.57■□□□□ 0.72
PCDHA3-201ENST00000522353 CCDC70Q6NSX1 233 aa19.57■□□□□ 0.72
PCDHA3-201ENST00000522353 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
PCDHA3-201ENST00000522353 SLC4A3P48751 1232 aa19.57■□□□□ 0.72
PCDHA3-201ENST00000522353 CCT4P50991 539 aaKnown RBP19.57■□□□□ 0.72
PCDHA3-201ENST00000522353 DNAJC2Q99543 621 aaKnown RBP19.57■□□□□ 0.72
PCDHA3-201ENST00000522353 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.56■□□□□ 0.72
PCDHA3-201ENST00000522353 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
PCDHA3-201ENST00000522353 SRCIN1Q9C0H9 1055 aa19.56■□□□□ 0.72
PCDHA3-201ENST00000522353 MPHOSPH8Q99549 860 aa19.55■□□□□ 0.72
PCDHA3-201ENST00000522353 TTC39AQ5SRH9 613 aa19.54■□□□□ 0.72
PCDHA3-201ENST00000522353 ARID3AQ99856 593 aa19.54■□□□□ 0.72
PCDHA3-201ENST00000522353 CT47B1P0C2W7 299 aaPredicted RBP19.54■□□□□ 0.72
PCDHA3-201ENST00000522353 GSE1Q14687 1217 aa19.53■□□□□ 0.72
PCDHA3-201ENST00000522353 NUDT16Q96DE0 195 aaKnown RBP19.53■□□□□ 0.72
PCDHA3-201ENST00000522353 MTMR7Q9Y216 660 aa19.53■□□□□ 0.72
PCDHA3-201ENST00000522353 ZC3H6P61129 1189 aaKnown RBP19.53■□□□□ 0.72
PCDHA3-201ENST00000522353 CCDC57Q2TAC2 916 aa19.53■□□□□ 0.72
PCDHA3-201ENST00000522353 C22orf23Q9BZE7 217 aa19.52■□□□□ 0.72
PCDHA3-201ENST00000522353 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.52■□□□□ 0.72
PCDHA3-201ENST00000522353 TOP2BQ02880 1626 aa19.52■□□□□ 0.72
PCDHA3-201ENST00000522353 NACAP1Q9BZK3 213 aa19.52■□□□□ 0.72
PCDHA3-201ENST00000522353 DAPK1P53355 1430 aa19.52■□□□□ 0.72
PCDHA3-201ENST00000522353 XPCQ01831 940 aaPredicted RBP19.51■□□□□ 0.71
PCDHA3-201ENST00000522353 GCC1Q96CN9 775 aa19.51■□□□□ 0.71
PCDHA3-201ENST00000522353 SASS6Q6UVJ0 657 aa19.5■□□□□ 0.71
PCDHA3-201ENST00000522353 KRI1Q8N9T8 703 aaKnown RBP19.5■□□□□ 0.71
PCDHA3-201ENST00000522353 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.5■□□□□ 0.71
PCDHA3-201ENST00000522353 STARD3NLO95772 234 aa19.5■□□□□ 0.71
PCDHA3-201ENST00000522353 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
PCDHA3-201ENST00000522353 PDE3AQ14432 1141 aa19.49■□□□□ 0.71
PCDHA3-201ENST00000522353 WDR63Q8IWG1 891 aa19.49■□□□□ 0.71
PCDHA3-201ENST00000522353 EPRSP07814 1512 aaKnown RBP19.49■□□□□ 0.71
PCDHA3-201ENST00000522353 FCHSD2O94868 740 aa19.49■□□□□ 0.71
PCDHA3-201ENST00000522353 BTBD11A6QL63 1104 aa19.49■□□□□ 0.71
PCDHA3-201ENST00000522353 FOSBP53539 338 aa19.48■□□□□ 0.71
PCDHA3-201ENST00000522353 CCAR2Q8N163 923 aaKnown RBP19.48■□□□□ 0.71
PCDHA3-201ENST00000522353 MYL6BP14649 208 aa19.48■□□□□ 0.71
PCDHA3-201ENST00000522353 ZSCAN25Q6NSZ9 544 aa19.48■□□□□ 0.71
PCDHA3-201ENST00000522353 CCDC141Q6ZP82 1450 aa19.48■□□□□ 0.71
PCDHA3-201ENST00000522353 RRS1Q15050 365 aaKnown RBP19.47■□□□□ 0.71
PCDHA3-201ENST00000522353 PDCP20941 246 aa19.47■□□□□ 0.71
PCDHA3-201ENST00000522353 RRP12Q5JTH9 1297 aaKnown RBP19.47■□□□□ 0.71
PCDHA3-201ENST00000522353 TNNT3P45378 269 aaPredicted RBP19.46■□□□□ 0.71
PCDHA3-201ENST00000522353 MAGI1Q96QZ7 1491 aaPredicted RBP19.46■□□□□ 0.71
PCDHA3-201ENST00000522353 TSR2Q969E8 191 aaKnown RBP19.46■□□□□ 0.71
PCDHA3-201ENST00000522353 CEP126Q9P2H0 1117 aa19.46■□□□□ 0.71
PCDHA3-201ENST00000522353 MCM2P49736 904 aa19.46■□□□□ 0.71
PCDHA3-201ENST00000522353 ZNF428Q96B54 188 aa19.46■□□□□ 0.71
PCDHA3-201ENST00000522353 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
PCDHA3-201ENST00000522353 GPS2Q13227 327 aa19.45■□□□□ 0.7
PCDHA3-201ENST00000522353 CT47A1Q5JQC4 288 aaPredicted RBP19.45■□□□□ 0.7
PCDHA3-201ENST00000522353 NOB1Q9ULX3 412 aaKnown RBP19.45■□□□□ 0.7
PCDHA3-201ENST00000522353 ZNF652Q9Y2D9 606 aa19.45■□□□□ 0.7
PCDHA3-201ENST00000522353 LAMC3Q9Y6N6 1575 aa19.45■□□□□ 0.7
PCDHA3-201ENST00000522353 NBPF8Q3BBV2 869 aa19.44■□□□□ 0.7
PCDHA3-201ENST00000522353 ABCA10Q8WWZ4 1543 aa19.44■□□□□ 0.7
PCDHA3-201ENST00000522353 WWC2Q6AWC2 1192 aa19.44■□□□□ 0.7
PCDHA3-201ENST00000522353 SDF4Q9BRK5 362 aa19.44■□□□□ 0.7
PCDHA3-201ENST00000522353 ADGRL1O94910 1474 aa19.44■□□□□ 0.7
PCDHA3-201ENST00000522353 LRRCC1Q9C099 1032 aa19.44■□□□□ 0.7
PCDHA3-201ENST00000522353 TXLNAP40222 546 aa19.43■□□□□ 0.7
PCDHA3-201ENST00000522353 OLFM4Q6UX06 510 aa19.43■□□□□ 0.7
PCDHA3-201ENST00000522353 GNAT3A8MTJ3 354 aa19.43■□□□□ 0.7
PCDHA3-201ENST00000522353 EPS15P42566 896 aa19.43■□□□□ 0.7
PCDHA3-201ENST00000522353 RBM5P52756 815 aaKnown RBP eCLIP19.43■□□□□ 0.7
PCDHA3-201ENST00000522353 ATP2B2Q01814 1243 aa19.43■□□□□ 0.7
PCDHA3-201ENST00000522353 OFD1O75665 1012 aa19.43■□□□□ 0.7
PCDHA3-201ENST00000522353 IGHMBP2P38935 993 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms