RNA–Protein interactions for RNA: ENST00000521611.1

RB1CC1-208, Transcript of RB1 inducible coiled-coil 1, human

TSL 5

Gene RB1CC1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RB1CC1-208	ENST00000521611	PAK3	O75914	559 aa	Predicted RBP	33.25	■■■□□ 2.91
RB1CC1-208	ENST00000521611	TULP4	Q9NRJ4	1543 aa		33.23	■■■□□ 2.91
RB1CC1-208	ENST00000521611	RAB3GAP2	Q9H2M9	1393 aa		33.23	■■■□□ 2.91
RB1CC1-208	ENST00000521611	NGDN	Q8NEJ9	315 aa	Known RBP	33.22	■■■□□ 2.91
RB1CC1-208	ENST00000521611	WASL	O00401	505 aa	Predicted RBP	33.21	■■■□□ 2.91
RB1CC1-208	ENST00000521611	DCAF11	Q8TEB1	546 aa		33.21	■■■□□ 2.91
RB1CC1-208	ENST00000521611	EIF3A	Q14152	1382 aa	Known RBP	33.21	■■■□□ 2.91
RB1CC1-208	ENST00000521611	EN1	Q05925	392 aa	Predicted RBP	33.19	■■■□□ 2.9
RB1CC1-208	ENST00000521611	LRP5	O75197	1615 aa		33.19	■■■□□ 2.9
RB1CC1-208	ENST00000521611	SPATA31A5	Q5VU36	1347 aa		33.18	■■■□□ 2.9
RB1CC1-208	ENST00000521611	SPATA31A7	Q8IWB4	1347 aa		33.18	■■■□□ 2.9
RB1CC1-208	ENST00000521611	PRDM11	Q9NQV5	511 aa		33.17	■■■□□ 2.9
RB1CC1-208	ENST00000521611	CRYBG1	Q9Y4K1	1723 aa		33.16	■■■□□ 2.9
RB1CC1-208	ENST00000521611	HRC	P23327	699 aa		33.14	■■■□□ 2.9
RB1CC1-208	ENST00000521611	RGPD1	P0DJD0	1748 aa		33.14	■■■□□ 2.89
RB1CC1-208	ENST00000521611	CHRNA2	Q15822	529 aa		33.12	■■■□□ 2.89
RB1CC1-208	ENST00000521611	THSD7A	Q9UPZ6	1657 aa		33.1	■■■□□ 2.89
RB1CC1-208	ENST00000521611	KIAA0232	Q92628	1395 aa		33.09	■■■□□ 2.89
RB1CC1-208	ENST00000521611	NUTM2G	Q5VZR2	741 aa		33.09	■■■□□ 2.89
RB1CC1-208	ENST00000521611	STRN4	Q9NRL3	753 aa		33.09	■■■□□ 2.89
RB1CC1-208	ENST00000521611	R3HDM1	Q15032	1099 aa	Known RBP	33.08	■■■□□ 2.89
RB1CC1-208	ENST00000521611	NUDT16	Q96DE0	195 aa	Known RBP	33.08	■■■□□ 2.89
RB1CC1-208	ENST00000521611	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.08	■■■□□ 2.89
RB1CC1-208	ENST00000521611	ATP7B	P35670	1465 aa		33.07	■■■□□ 2.88
RB1CC1-208	ENST00000521611	ITSN1	Q15811	1721 aa		33.06	■■■□□ 2.88
RB1CC1-208	ENST00000521611	ZC3H6	P61129	1189 aa	Known RBP	33.06	■■■□□ 2.88
RB1CC1-208	ENST00000521611	TNS1	Q9HBL0	1735 aa	Known RBP	33.05	■■■□□ 2.88
RB1CC1-208	ENST00000521611	SPATA31A1	Q5TZJ5	1347 aa		33.04	■■■□□ 2.88
RB1CC1-208	ENST00000521611	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.04	■■■□□ 2.88
RB1CC1-208	ENST00000521611	EZH2	Q15910	746 aa	Known RBP	33.04	■■■□□ 2.88
RB1CC1-208	ENST00000521611	USP35	Q9P2H5	1018 aa		33.03	■■■□□ 2.88
RB1CC1-208	ENST00000521611	TRIM37	O94972	964 aa		33.01	■■■□□ 2.87
RB1CC1-208	ENST00000521611	CDK19	Q9BWU1	502 aa		33	■■■□□ 2.87
RB1CC1-208	ENST00000521611	DISP2	A7MBM2	1401 aa		32.98	■■■□□ 2.87
RB1CC1-208	ENST00000521611	STAC3	Q96MF2	364 aa		32.96	■■■□□ 2.87
RB1CC1-208	ENST00000521611	ACE	P12821	1306 aa		32.96	■■■□□ 2.87
RB1CC1-208	ENST00000521611	EVA1C	P58658	441 aa		32.95	■■■□□ 2.87
RB1CC1-208	ENST00000521611	FAM196A	Q6ZSG2	479 aa		32.95	■■■□□ 2.87
RB1CC1-208	ENST00000521611	APBA3	O96018	575 aa		32.93	■■■□□ 2.86
RB1CC1-208	ENST00000521611	CAMKK2	Q96RR4	588 aa		32.93	■■■□□ 2.86
RB1CC1-208	ENST00000521611	NBPF8	Q3BBV2	869 aa		32.92	■■■□□ 2.86
RB1CC1-208	ENST00000521611	TOPAZ1	Q8N9V7	1692 aa		32.91	■■■□□ 2.86
RB1CC1-208	ENST00000521611	SSH2	Q76I76	1423 aa		32.91	■■■□□ 2.86
RB1CC1-208	ENST00000521611	POLR3A	O14802	1390 aa	Predicted RBP	32.9	■■■□□ 2.86
RB1CC1-208	ENST00000521611	NRK	Q7Z2Y5	1582 aa		32.89	■■■□□ 2.86
RB1CC1-208	ENST00000521611	LARP1	Q6PKG0	1096 aa	Known RBP	32.89	■■■□□ 2.86
RB1CC1-208	ENST00000521611	ABTB2	Q8N961	1025 aa		32.89	■■■□□ 2.86
RB1CC1-208	ENST00000521611	CCDC61	Q9Y6R9	512 aa		32.89	■■■□□ 2.86
RB1CC1-208	ENST00000521611	PDE3B	Q13370	1112 aa		32.88	■■■□□ 2.85
RB1CC1-208	ENST00000521611	CAMTA1	Q9Y6Y1	1673 aa		32.88	■■■□□ 2.85
RB1CC1-208	ENST00000521611	PLEKHG3	A1L390	1219 aa		32.84	■■■□□ 2.85
RB1CC1-208	ENST00000521611	BARGIN	Q6ZT62	677 aa		32.84	■■■□□ 2.85
RB1CC1-208	ENST00000521611	TCP11L2	Q8N4U5	519 aa		32.82	■■■□□ 2.84
RB1CC1-208	ENST00000521611	NBPF1	Q3BBV0	1214 aa		32.81	■■■□□ 2.84
RB1CC1-208	ENST00000521611	LMO7	Q8WWI1	1683 aa		32.81	■■■□□ 2.84
RB1CC1-208	ENST00000521611	ZBTB7C	A1YPR0	619 aa		32.8	■■■□□ 2.84
RB1CC1-208	ENST00000521611	SRPK2	P78362	688 aa	Known RBP	32.8	■■■□□ 2.84
RB1CC1-208	ENST00000521611	USP19	O94966	1318 aa		32.79	■■■□□ 2.84
RB1CC1-208	ENST00000521611	PARD3	Q8TEW0	1356 aa		32.79	■■■□□ 2.84
RB1CC1-208	ENST00000521611	RREB1	Q92766	1687 aa		32.78	■■■□□ 2.84
RB1CC1-208	ENST00000521611	CPD	O75976	1380 aa		32.78	■■■□□ 2.84
RB1CC1-208	ENST00000521611	PPIP5K1	Q6PFW1	1433 aa		32.77	■■■□□ 2.84
RB1CC1-208	ENST00000521611	NUP188	Q5SRE5	1749 aa		32.77	■■■□□ 2.84
RB1CC1-208	ENST00000521611	KIAA1210	Q9ULL0	1709 aa		32.77	■■■□□ 2.84
RB1CC1-208	ENST00000521611	GC	P02774	474 aa		32.76	■■■□□ 2.83
RB1CC1-208	ENST00000521611	NLRP13	Q86W25	1043 aa		32.76	■■■□□ 2.83
RB1CC1-208	ENST00000521611	CABP2	Q9NPB3	220 aa		32.76	■■■□□ 2.83
RB1CC1-208	ENST00000521611	NBPF14	Q5TI25	921 aa		32.72	■■■□□ 2.83
RB1CC1-208	ENST00000521611	COL5A2	P05997	1499 aa	Predicted RBP	32.72	■■■□□ 2.83
RB1CC1-208	ENST00000521611	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.71	■■■□□ 2.83
RB1CC1-208	ENST00000521611	THRAP3	Q9Y2W1	955 aa	Known RBP	32.7	■■■□□ 2.83
RB1CC1-208	ENST00000521611	PARP4	Q9UKK3	1724 aa	Known RBP	32.68	■■■□□ 2.82
RB1CC1-208	ENST00000521611	NLRP6	P59044	892 aa		32.66	■■■□□ 2.82
RB1CC1-208	ENST00000521611	QRICH2	Q9H0J4	1663 aa		32.66	■■■□□ 2.82
RB1CC1-208	ENST00000521611	CABP1	Q9NZU7	370 aa		32.65	■■■□□ 2.82
RB1CC1-208	ENST00000521611	CRB1	P82279	1406 aa		32.65	■■■□□ 2.82
RB1CC1-208	ENST00000521611	USP6	P35125	1406 aa		32.62	■■■□□ 2.81
RB1CC1-208	ENST00000521611	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.61	■■■□□ 2.81
RB1CC1-208	ENST00000521611	OVOS2	A0A0G2JMS6	1433 aa		32.6	■■■□□ 2.81
RB1CC1-208	ENST00000521611	OVOS2	A0A0J9YW53	1432 aa		32.6	■■■□□ 2.81
RB1CC1-208	ENST00000521611	OVOS2	Q6IE36	1432 aa		32.6	■■■□□ 2.81
RB1CC1-208	ENST00000521611	LRRC37A3	O60309	1634 aa		32.59	■■■□□ 2.81
RB1CC1-208	ENST00000521611	TOM1L2	Q6ZVM7	507 aa		32.59	■■■□□ 2.81
RB1CC1-208	ENST00000521611	AATK	Q6ZMQ8	1374 aa		32.58	■■■□□ 2.81
RB1CC1-208	ENST00000521611	PEAK1	Q9H792	1746 aa		32.58	■■■□□ 2.81
RB1CC1-208	ENST00000521611	SPON1	Q9HCB6	807 aa		32.58	■■■□□ 2.81
RB1CC1-208	ENST00000521611	SLIT3	O75094	1523 aa		32.57	■■■□□ 2.8
RB1CC1-208	ENST00000521611	DDB1	Q16531	1140 aa		32.57	■■■□□ 2.8
RB1CC1-208	ENST00000521611	BRD4	O60885	1362 aa	Predicted RBP	32.57	■■■□□ 2.8
RB1CC1-208	ENST00000521611	PTF1A	Q7RTS3	328 aa		32.56	■■■□□ 2.8
RB1CC1-208	ENST00000521611	SBF2	Q86WG5	1849 aa		32.56	■■■□□ 2.8
RB1CC1-208	ENST00000521611	KCNQ2	O43526	872 aa		32.55	■■■□□ 2.8
RB1CC1-208	ENST00000521611	YY1	P25490	414 aa		32.55	■■■□□ 2.8
RB1CC1-208	ENST00000521611	PIK3C2A	O00443	1686 aa		32.55	■■■□□ 2.8
RB1CC1-208	ENST00000521611	SOX12	O15370	315 aa		32.54	■■■□□ 2.8
RB1CC1-208	ENST00000521611	AXIN2	Q9Y2T1	843 aa		32.54	■■■□□ 2.8
RB1CC1-208	ENST00000521611	C11orf95	C9JLR9	678 aa	Predicted RBP	32.53	■■■□□ 2.8
RB1CC1-208	ENST00000521611	COL18A1	P39060	1754 aa		32.53	■■■□□ 2.8
RB1CC1-208	ENST00000521611	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.52	■■■□□ 2.8
RB1CC1-208	ENST00000521611	WNK3	Q9BYP7	1800 aa		32.49	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms