RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 PLCH1Q4KWH8 1693 aa19.94■□□□□ 0.78
SPARC-203ENST00000521327 NWD2Q9ULI1 1742 aa19.93■□□□□ 0.78
SPARC-203ENST00000521327 HRCP23327 699 aa19.93■□□□□ 0.78
SPARC-203ENST00000521327 ADGRB1O14514 1584 aa19.92■□□□□ 0.78
SPARC-203ENST00000521327 RAB3GAP2Q9H2M9 1393 aa19.92■□□□□ 0.78
SPARC-203ENST00000521327 ADGRB2O60241 1585 aa19.89■□□□□ 0.77
SPARC-203ENST00000521327 NUDT16Q96DE0 195 aaKnown RBP19.89■□□□□ 0.77
SPARC-203ENST00000521327 ABCA3Q99758 1704 aa19.88■□□□□ 0.77
SPARC-203ENST00000521327 R3HDM1Q15032 1099 aaKnown RBP19.88■□□□□ 0.77
SPARC-203ENST00000521327 CHRNA2Q15822 529 aa19.88■□□□□ 0.77
SPARC-203ENST00000521327 TULP4Q9NRJ4 1543 aa19.87■□□□□ 0.77
SPARC-203ENST00000521327 STAC3Q96MF2 364 aa19.87■□□□□ 0.77
SPARC-203ENST00000521327 STRN4Q9NRL3 753 aa19.87■□□□□ 0.77
SPARC-203ENST00000521327 KIAA0232Q92628 1395 aa19.86■□□□□ 0.77
SPARC-203ENST00000521327 SPATA31A1Q5TZJ5 1347 aa19.86■□□□□ 0.77
SPARC-203ENST00000521327 ZC3H6P61129 1189 aaKnown RBP19.86■□□□□ 0.77
SPARC-203ENST00000521327 NUTM2GQ5VZR2 741 aa19.86■□□□□ 0.77
SPARC-203ENST00000521327 TRPM3Q9HCF6 1732 aaPredicted RBP19.85■□□□□ 0.77
SPARC-203ENST00000521327 EZH2Q15910 746 aaKnown RBP19.85■□□□□ 0.77
SPARC-203ENST00000521327 COL14A1Q05707 1796 aaKnown RBP19.85■□□□□ 0.77
SPARC-203ENST00000521327 NRAPQ86VF7 1730 aa19.85■□□□□ 0.77
SPARC-203ENST00000521327 TRIM37O94972 964 aa19.84■□□□□ 0.77
SPARC-203ENST00000521327 CDK19Q9BWU1 502 aa19.84■□□□□ 0.77
SPARC-203ENST00000521327 USP35Q9P2H5 1018 aa19.84■□□□□ 0.77
SPARC-203ENST00000521327 FAM196AQ6ZSG2 479 aa19.83■□□□□ 0.77
SPARC-203ENST00000521327 ALS2Q96Q42 1657 aa19.83■□□□□ 0.76
SPARC-203ENST00000521327 EVA1CP58658 441 aa19.82■□□□□ 0.76
SPARC-203ENST00000521327 LRP5O75197 1615 aa19.81■□□□□ 0.76
SPARC-203ENST00000521327 NBPF8Q3BBV2 869 aa19.81■□□□□ 0.76
SPARC-203ENST00000521327 CAMKK2Q96RR4 588 aa19.81■□□□□ 0.76
SPARC-203ENST00000521327 DISP2A7MBM2 1401 aa19.8■□□□□ 0.76
SPARC-203ENST00000521327 APBA3O96018 575 aa19.8■□□□□ 0.76
SPARC-203ENST00000521327 ACEP12821 1306 aa19.79■□□□□ 0.76
SPARC-203ENST00000521327 CCDC61Q9Y6R9 512 aa19.79■□□□□ 0.76
SPARC-203ENST00000521327 ATP7BP35670 1465 aa19.79■□□□□ 0.76
SPARC-203ENST00000521327 PDE3BQ13370 1112 aa19.78■□□□□ 0.76
SPARC-203ENST00000521327 LARP1Q6PKG0 1096 aaKnown RBP19.77■□□□□ 0.76
SPARC-203ENST00000521327 ABTB2Q8N961 1025 aa19.77■□□□□ 0.76
SPARC-203ENST00000521327 THSD7AQ9UPZ6 1657 aa19.76■□□□□ 0.75
SPARC-203ENST00000521327 PLEKHG3A1L390 1219 aa19.76■□□□□ 0.75
SPARC-203ENST00000521327 BARGINQ6ZT62 677 aa19.76■□□□□ 0.75
SPARC-203ENST00000521327 POLR3AO14802 1390 aaPredicted RBP19.75■□□□□ 0.75
SPARC-203ENST00000521327 TCP11L2Q8N4U5 519 aa19.74■□□□□ 0.75
SPARC-203ENST00000521327 SSH2Q76I76 1423 aa19.73■□□□□ 0.75
SPARC-203ENST00000521327 RGPD1P0DJD0 1748 aa19.73■□□□□ 0.75
SPARC-203ENST00000521327 PARD3Q8TEW0 1356 aa19.71■□□□□ 0.75
SPARC-203ENST00000521327 CRYBG1Q9Y4K1 1723 aa19.71■□□□□ 0.75
SPARC-203ENST00000521327 GCP02774 474 aa19.71■□□□□ 0.75
SPARC-203ENST00000521327 NBPF1Q3BBV0 1214 aa19.71■□□□□ 0.75
SPARC-203ENST00000521327 SRPK2P78362 688 aaKnown RBP19.7■□□□□ 0.74
SPARC-203ENST00000521327 NBPF14Q5TI25 921 aa19.7■□□□□ 0.74
SPARC-203ENST00000521327 NLRP13Q86W25 1043 aa19.7■□□□□ 0.74
SPARC-203ENST00000521327 CPDO75976 1380 aa19.7■□□□□ 0.74
SPARC-203ENST00000521327 USP19O94966 1318 aa19.69■□□□□ 0.74
SPARC-203ENST00000521327 CAMTA1Q9Y6Y1 1673 aa19.68■□□□□ 0.74
SPARC-203ENST00000521327 CABP2Q9NPB3 220 aa19.68■□□□□ 0.74
SPARC-203ENST00000521327 THRAP3Q9Y2W1 955 aaKnown RBP19.68■□□□□ 0.74
SPARC-203ENST00000521327 ZBTB7CA1YPR0 619 aa19.67■□□□□ 0.74
SPARC-203ENST00000521327 ARHGEF28Q8N1W1 1705 aaKnown RBP19.67■□□□□ 0.74
SPARC-203ENST00000521327 TNS1Q9HBL0 1735 aaKnown RBP19.67■□□□□ 0.74
SPARC-203ENST00000521327 PHRF1Q9P1Y6 1649 aaKnown RBP19.65■□□□□ 0.74
SPARC-203ENST00000521327 ITSN1Q15811 1721 aa19.65■□□□□ 0.74
SPARC-203ENST00000521327 CABP1Q9NZU7 370 aa19.64■□□□□ 0.73
SPARC-203ENST00000521327 CENPJQ9HC77 1338 aaPredicted RBP19.64■□□□□ 0.73
SPARC-203ENST00000521327 PPIP5K1Q6PFW1 1433 aa19.64■□□□□ 0.73
SPARC-203ENST00000521327 NLRP6P59044 892 aa19.63■□□□□ 0.73
SPARC-203ENST00000521327 NRKQ7Z2Y5 1582 aa19.61■□□□□ 0.73
SPARC-203ENST00000521327 C11orf95C9JLR9 678 aaPredicted RBP19.61■□□□□ 0.73
SPARC-203ENST00000521327 SPON1Q9HCB6 807 aa19.6■□□□□ 0.73
SPARC-203ENST00000521327 PPP1R1BQ9UD71 204 aaPredicted RBP19.6■□□□□ 0.73
SPARC-203ENST00000521327 COL5A2P05997 1499 aaPredicted RBP19.6■□□□□ 0.73
SPARC-203ENST00000521327 CRB1P82279 1406 aa19.59■□□□□ 0.73
SPARC-203ENST00000521327 KCNQ2O43526 872 aa19.59■□□□□ 0.73
SPARC-203ENST00000521327 TOM1L2Q6ZVM7 507 aa19.59■□□□□ 0.73
SPARC-203ENST00000521327 TOPAZ1Q8N9V7 1692 aa19.59■□□□□ 0.73
SPARC-203ENST00000521327 BRD4O60885 1362 aaPredicted RBP19.58■□□□□ 0.73
SPARC-203ENST00000521327 YY1P25490 414 aa19.58■□□□□ 0.72
SPARC-203ENST00000521327 DDB1Q16531 1140 aa19.58■□□□□ 0.72
SPARC-203ENST00000521327 AATKQ6ZMQ8 1374 aa19.57■□□□□ 0.72
SPARC-203ENST00000521327 LMO7Q8WWI1 1683 aa19.57■□□□□ 0.72
SPARC-203ENST00000521327 PLSCR1O15162 318 aa19.56■□□□□ 0.72
SPARC-203ENST00000521327 PTF1AQ7RTS3 328 aa19.56■□□□□ 0.72
SPARC-203ENST00000521327 AXIN2Q9Y2T1 843 aa19.56■□□□□ 0.72
SPARC-203ENST00000521327 OVOS2A0A0G2JMS6 1433 aa19.55■□□□□ 0.72
SPARC-203ENST00000521327 OVOS2A0A0J9YW53 1432 aa19.55■□□□□ 0.72
SPARC-203ENST00000521327 USP6P35125 1406 aa19.55■□□□□ 0.72
SPARC-203ENST00000521327 OVOS2Q6IE36 1432 aa19.55■□□□□ 0.72
SPARC-203ENST00000521327 BCL11BQ9C0K0 894 aaPredicted RBP19.54■□□□□ 0.72
SPARC-203ENST00000521327 DCAF8L1A6NGE4 600 aa19.53■□□□□ 0.72
SPARC-203ENST00000521327 SOX12O15370 315 aa19.52■□□□□ 0.72
SPARC-203ENST00000521327 MARCH10Q8NA82 808 aaPredicted RBP19.52■□□□□ 0.72
SPARC-203ENST00000521327 ANO8Q9HCE9 1232 aaPredicted RBP19.52■□□□□ 0.72
SPARC-203ENST00000521327 RREB1Q92766 1687 aa19.52■□□□□ 0.71
SPARC-203ENST00000521327 EVC2Q86UK5 1308 aa19.51■□□□□ 0.71
SPARC-203ENST00000521327 WDR17Q8IZU2 1322 aa19.51■□□□□ 0.71
SPARC-203ENST00000521327 KIAA1210Q9ULL0 1709 aa19.51■□□□□ 0.71
SPARC-203ENST00000521327 PROM2Q8N271 834 aa19.51■□□□□ 0.71
SPARC-203ENST00000521327 L3MBTL2Q969R5 705 aa19.51■□□□□ 0.71
SPARC-203ENST00000521327 NUP188Q5SRE5 1749 aa19.51■□□□□ 0.71
SPARC-203ENST00000521327 CSB-PGBD3P0DP91 1061 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms