RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 FAM160A2Q8N612 972 aaPredicted RBP11.61□□□□□ -0.55
SHPRH-208ENST00000520752 ADH1BP00325 375 aa11.6□□□□□ -0.55
SHPRH-208ENST00000520752 ITGAEP38570 1179 aa11.6□□□□□ -0.55
SHPRH-208ENST00000520752 AAMPQ13685 434 aa11.6□□□□□ -0.55
SHPRH-208ENST00000520752 ITGBL1O95965 494 aaPredicted RBP11.59□□□□□ -0.55
SHPRH-208ENST00000520752 LYPD8Q6UX82 237 aa11.59□□□□□ -0.55
SHPRH-208ENST00000520752 MTMR14Q8NCE2 650 aa11.58□□□□□ -0.56
SHPRH-208ENST00000520752 TSC1Q92574 1164 aa11.58□□□□□ -0.56
SHPRH-208ENST00000520752 ARXQ96QS3 562 aa11.58□□□□□ -0.56
SHPRH-208ENST00000520752 TLL1O43897 1013 aa11.57□□□□□ -0.56
SHPRH-208ENST00000520752 JUNDP17535 347 aa11.57□□□□□ -0.56
SHPRH-208ENST00000520752 MMP16P51512 607 aa11.57□□□□□ -0.56
SHPRH-208ENST00000520752 APBB1O00213 710 aa11.56□□□□□ -0.56
SHPRH-208ENST00000520752 DXOO77932 396 aaKnown RBP11.56□□□□□ -0.56
SHPRH-208ENST00000520752 PER1O15534 1290 aaPredicted RBP11.55□□□□□ -0.56
SHPRH-208ENST00000520752 UBTFP17480 764 aaKnown RBP11.55□□□□□ -0.56
SHPRH-208ENST00000520752 KCNC4Q03721 635 aa11.55□□□□□ -0.56
SHPRH-208ENST00000520752 LRRN4Q8WUT4 740 aa11.55□□□□□ -0.56
SHPRH-208ENST00000520752 RBM10P98175 930 aaKnown RBP11.54□□□□□ -0.56
SHPRH-208ENST00000520752 CENPJQ9HC77 1338 aaPredicted RBP11.54□□□□□ -0.56
SHPRH-208ENST00000520752 NEFMP07197 916 aa11.53□□□□□ -0.56
SHPRH-208ENST00000520752 PTPRNQ16849 979 aa11.53□□□□□ -0.56
SHPRH-208ENST00000520752 ZNF326Q5BKZ1 582 aaKnown RBP11.53□□□□□ -0.56
SHPRH-208ENST00000520752 TAF7LQ5H9L4 462 aa11.53□□□□□ -0.56
SHPRH-208ENST00000520752 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
SHPRH-208ENST00000520752 GJD4Q96KN9 370 aaPredicted RBP11.53□□□□□ -0.56
SHPRH-208ENST00000520752 SLC6A16Q9GZN6 736 aa11.53□□□□□ -0.56
SHPRH-208ENST00000520752 HSP90AA2PQ14568 343 aaPredicted RBP11.52□□□□□ -0.57
SHPRH-208ENST00000520752 HMX1Q9NP08 348 aaPredicted RBP11.52□□□□□ -0.57
SHPRH-208ENST00000520752 A6NJR5 290 aa11.51□□□□□ -0.57
SHPRH-208ENST00000520752 PRM3Q9NNZ6 103 aa11.51□□□□□ -0.57
SHPRH-208ENST00000520752 PRDM9Q9NQV7 894 aa11.51□□□□□ -0.57
SHPRH-208ENST00000520752 TRIM34Q9BYJ4 488 aa11.5□□□□□ -0.57
SHPRH-208ENST00000520752 RAD21O60216 631 aa11.49□□□□□ -0.57
SHPRH-208ENST00000520752 COG6Q9Y2V7 657 aa11.49□□□□□ -0.57
SHPRH-208ENST00000520752 F12P00748 615 aaPredicted RBP11.48□□□□□ -0.57
SHPRH-208ENST00000520752 CLUAP1Q96AJ1 413 aa11.48□□□□□ -0.57
SHPRH-208ENST00000520752 EVA1BQ9NVM1 165 aa11.48□□□□□ -0.57
SHPRH-208ENST00000520752 TNIKQ9UKE5 1360 aa11.48□□□□□ -0.57
SHPRH-208ENST00000520752 ABCC9O60706 1549 aa11.47□□□□□ -0.57
SHPRH-208ENST00000520752 HSP90AA1P07900 732 aaKnown RBP11.47□□□□□ -0.57
SHPRH-208ENST00000520752 CCNYL3P0C7X3 344 aa11.47□□□□□ -0.57
SHPRH-208ENST00000520752 CALD1Q05682 793 aaKnown RBP11.47□□□□□ -0.57
SHPRH-208ENST00000520752 POM121Q96HA1 1249 aa11.47□□□□□ -0.57
SHPRH-208ENST00000520752 NDUFB9Q9Y6M9 179 aa11.47□□□□□ -0.57
SHPRH-208ENST00000520752 RB1CC1Q8TDY2 1594 aa11.46□□□□□ -0.57
SHPRH-208ENST00000520752 S1PR4O95977 384 aa11.46□□□□□ -0.57
SHPRH-208ENST00000520752 NR6A1Q15406 480 aa11.46□□□□□ -0.57
SHPRH-208ENST00000520752 IFFO2Q5TF58 517 aa11.46□□□□□ -0.57
SHPRH-208ENST00000520752 NUDT12Q9BQG2 462 aa11.46□□□□□ -0.57
SHPRH-208ENST00000520752 EPS8L1Q8TE68 723 aa11.45□□□□□ -0.58
SHPRH-208ENST00000520752 KCNH2Q12809 1159 aa11.44□□□□□ -0.58
SHPRH-208ENST00000520752 GDPD2Q9HCC8 539 aa11.44□□□□□ -0.58
SHPRH-208ENST00000520752 BRPF3Q9ULD4 1205 aa11.44□□□□□ -0.58
SHPRH-208ENST00000520752 TBC1D2BQ9UPU7 963 aa11.44□□□□□ -0.58
SHPRH-208ENST00000520752 CEP162Q5TB80 1403 aa11.43□□□□□ -0.58
SHPRH-208ENST00000520752 NCLP19338 710 aaKnown RBP11.43□□□□□ -0.58
SHPRH-208ENST00000520752 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
SHPRH-208ENST00000520752 DHX57Q6P158 1386 aaKnown RBP11.42□□□□□ -0.58
SHPRH-208ENST00000520752 MAP10Q9P2G4 905 aa11.42□□□□□ -0.58
SHPRH-208ENST00000520752 GPR37L1O60883 481 aa11.41□□□□□ -0.58
SHPRH-208ENST00000520752 CTHP32929 405 aa11.41□□□□□ -0.58
SHPRH-208ENST00000520752 GGCXP38435 758 aa11.41□□□□□ -0.58
SHPRH-208ENST00000520752 PROSER2Q86WR7 435 aaPredicted RBP11.41□□□□□ -0.58
SHPRH-208ENST00000520752 PNMA1Q8ND90 353 aa11.41□□□□□ -0.58
SHPRH-208ENST00000520752 ANP32CO43423 234 aa11.4□□□□□ -0.58
SHPRH-208ENST00000520752 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
SHPRH-208ENST00000520752 TRAK2O60296 914 aa11.39□□□□□ -0.59
SHPRH-208ENST00000520752 ARMC2Q8NEN0 867 aa11.39□□□□□ -0.59
SHPRH-208ENST00000520752 FCF1Q9Y324 198 aaKnown RBP11.39□□□□□ -0.59
SHPRH-208ENST00000520752 NACADO15069 1562 aa11.38□□□□□ -0.59
SHPRH-208ENST00000520752 A0A0U1RQG5 324 aaPredicted RBP11.38□□□□□ -0.59
SHPRH-208ENST00000520752 ABL2P42684 1182 aa11.38□□□□□ -0.59
SHPRH-208ENST00000520752 PTCRAQ6ISU1 281 aaPredicted RBP11.38□□□□□ -0.59
SHPRH-208ENST00000520752 CCDC24Q8N4L8 307 aa11.38□□□□□ -0.59
SHPRH-208ENST00000520752 ANKLE1Q8NAG6 615 aa11.38□□□□□ -0.59
SHPRH-208ENST00000520752 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.38□□□□□ -0.59
SHPRH-208ENST00000520752 FKBPLQ9UIM3 349 aa11.38□□□□□ -0.59
SHPRH-208ENST00000520752 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
SHPRH-208ENST00000520752 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
SHPRH-208ENST00000520752 IRF5Q13568 498 aa11.37□□□□□ -0.59
SHPRH-208ENST00000520752 PPP1R18Q6NYC8 613 aa11.37□□□□□ -0.59
SHPRH-208ENST00000520752 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
SHPRH-208ENST00000520752 PDCL3Q9H2J4 239 aa11.37□□□□□ -0.59
SHPRH-208ENST00000520752 PPEF1O14829 653 aaPredicted RBP11.36□□□□□ -0.59
SHPRH-208ENST00000520752 PPP1R15AO75807 674 aaPredicted RBP11.36□□□□□ -0.59
SHPRH-208ENST00000520752 GPKOWQ92917 476 aaPredicted RBP eCLIP11.36□□□□□ -0.59
SHPRH-208ENST00000520752 UNC93B1Q9H1C4 597 aa11.35□□□□□ -0.59
SHPRH-208ENST00000520752 CUX2O14529 1486 aa11.34□□□□□ -0.59
SHPRH-208ENST00000520752 WASHC4Q2M389 1173 aa11.34□□□□□ -0.59
SHPRH-208ENST00000520752 TPM2P07951 284 aa11.33□□□□□ -0.6
SHPRH-208ENST00000520752 L1TD1Q5T7N2 865 aaKnown RBP11.33□□□□□ -0.6
SHPRH-208ENST00000520752 PLA2G2EQ9NZK7 142 aa11.33□□□□□ -0.6
SHPRH-208ENST00000520752 ZNF330Q9Y3S2 320 aaPredicted RBP11.33□□□□□ -0.6
SHPRH-208ENST00000520752 PDXDC2PQ6P474 469 aa11.32□□□□□ -0.6
SHPRH-208ENST00000520752 MAP7D2Q96T17 732 aa11.32□□□□□ -0.6
SHPRH-208ENST00000520752 PRDM4Q9UKN5 801 aa11.32□□□□□ -0.6
SHPRH-208ENST00000520752 GPSM3Q9Y4H4 160 aa11.32□□□□□ -0.6
SHPRH-208ENST00000520752 NBPF14Q5TI25 921 aa11.31□□□□□ -0.6
SHPRH-208ENST00000520752 TCERG1O14776 1098 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms