RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 TRIM37O94972 964 aa12.21□□□□□ -0.45
CSMD1-209ENST00000520630 NRKQ7Z2Y5 1582 aa12.21□□□□□ -0.46
CSMD1-209ENST00000520630 CEP350Q5VT06 3117 aa12.21□□□□□ -0.46
CSMD1-209ENST00000520630 ARHGEF10O15013 1369 aa12.2□□□□□ -0.46
CSMD1-209ENST00000520630 A0A0G2JS52 829 aa12.2□□□□□ -0.46
CSMD1-209ENST00000520630 MYT1Q01538 1121 aa12.2□□□□□ -0.46
CSMD1-209ENST00000520630 LMO7Q8WWI1 1683 aa12.19□□□□□ -0.46
CSMD1-209ENST00000520630 HAP1P54257 671 aaPredicted RBP12.19□□□□□ -0.46
CSMD1-209ENST00000520630 ITSN1Q15811 1721 aa12.18□□□□□ -0.46
CSMD1-209ENST00000520630 PSME1Q06323 249 aa12.18□□□□□ -0.46
CSMD1-209ENST00000520630 RGPD5Q99666 1765 aa12.18□□□□□ -0.46
CSMD1-209ENST00000520630 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
CSMD1-209ENST00000520630 SPATA31A1Q5TZJ5 1347 aa12.17□□□□□ -0.46
CSMD1-209ENST00000520630 LMOD2Q6P5Q4 547 aa12.17□□□□□ -0.46
CSMD1-209ENST00000520630 PMFBP1Q8TBY8 1022 aa12.17□□□□□ -0.46
CSMD1-209ENST00000520630 SIRT1Q96EB6 747 aa12.17□□□□□ -0.46
CSMD1-209ENST00000520630 AKAP12Q02952 1782 aa12.17□□□□□ -0.46
CSMD1-209ENST00000520630 GOLGB1Q14789 3259 aaKnown RBP12.16□□□□□ -0.46
CSMD1-209ENST00000520630 APBA3O96018 575 aa12.16□□□□□ -0.46
CSMD1-209ENST00000520630 NINLQ9Y2I6 1382 aa12.16□□□□□ -0.46
CSMD1-209ENST00000520630 ZNF784Q8NCA9 323 aaPredicted RBP12.15□□□□□ -0.46
CSMD1-209ENST00000520630 PRR36Q9H6K5 1346 aa12.14□□□□□ -0.47
CSMD1-209ENST00000520630 ANKARQ7Z5J8 1434 aa12.14□□□□□ -0.47
CSMD1-209ENST00000520630 KCNQ2O43526 872 aa12.14□□□□□ -0.47
CSMD1-209ENST00000520630 FAM196AQ6ZSG2 479 aa12.14□□□□□ -0.47
CSMD1-209ENST00000520630 PDGFDQ9GZP0 370 aaPredicted RBP12.14□□□□□ -0.47
CSMD1-209ENST00000520630 DLC1Q96QB1 1528 aa12.14□□□□□ -0.47
CSMD1-209ENST00000520630 TOPAZ1Q8N9V7 1692 aa12.13□□□□□ -0.47
CSMD1-209ENST00000520630 LRRC37A3O60309 1634 aa12.13□□□□□ -0.47
CSMD1-209ENST00000520630 RGL3Q3MIN7 710 aa12.13□□□□□ -0.47
CSMD1-209ENST00000520630 ARHGEF28Q8N1W1 1705 aaKnown RBP12.13□□□□□ -0.47
CSMD1-209ENST00000520630 COL24A1Q17RW2 1714 aa12.12□□□□□ -0.47
CSMD1-209ENST00000520630 IFFO2Q5TF58 517 aa12.12□□□□□ -0.47
CSMD1-209ENST00000520630 SPON1Q9HCB6 807 aa12.12□□□□□ -0.47
CSMD1-209ENST00000520630 ANKRD30BQ9BXX2 1392 aa12.12□□□□□ -0.47
CSMD1-209ENST00000520630 ADGRB1O14514 1584 aa12.12□□□□□ -0.47
CSMD1-209ENST00000520630 KAT6BQ8WYB5 2073 aa12.11□□□□□ -0.47
CSMD1-209ENST00000520630 COL18A1P39060 1754 aa12.11□□□□□ -0.47
CSMD1-209ENST00000520630 KIAA0232Q92628 1395 aa12.11□□□□□ -0.47
CSMD1-209ENST00000520630 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
CSMD1-209ENST00000520630 CHRNA2Q15822 529 aa12.11□□□□□ -0.47
CSMD1-209ENST00000520630 PPARGC1BQ86YN6 1023 aaKnown RBP12.11□□□□□ -0.47
CSMD1-209ENST00000520630 C14orf93Q9H972 538 aaKnown RBP12.11□□□□□ -0.47
CSMD1-209ENST00000520630 TULP4Q9NRJ4 1543 aa12.11□□□□□ -0.47
CSMD1-209ENST00000520630 ACIN1Q9UKV3 1341 aaKnown RBP12.11□□□□□ -0.47
CSMD1-209ENST00000520630 PRAM1Q96QH2 718 aa12.1□□□□□ -0.47
CSMD1-209ENST00000520630 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
CSMD1-209ENST00000520630 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
CSMD1-209ENST00000520630 TUBGCP6Q96RT7 1819 aa12.09□□□□□ -0.47
CSMD1-209ENST00000520630 CFAP70Q5T0N1 1121 aa12.09□□□□□ -0.47
CSMD1-209ENST00000520630 PTF1AQ7RTS3 328 aa12.09□□□□□ -0.47
CSMD1-209ENST00000520630 SSH2Q76I76 1423 aa12.09□□□□□ -0.47
CSMD1-209ENST00000520630 PTGER2P43116 358 aa12.08□□□□□ -0.48
CSMD1-209ENST00000520630 BARGINQ6ZT62 677 aa12.08□□□□□ -0.48
CSMD1-209ENST00000520630 PRDM11Q9NQV5 511 aa12.08□□□□□ -0.48
CSMD1-209ENST00000520630 PPP1R1BQ9UD71 204 aaPredicted RBP12.08□□□□□ -0.48
CSMD1-209ENST00000520630 NBPF8Q3BBV2 869 aa12.07□□□□□ -0.48
CSMD1-209ENST00000520630 NBPF14Q5TI25 921 aa12.07□□□□□ -0.48
CSMD1-209ENST00000520630 SHANK3Q9BYB0 1731 aa12.07□□□□□ -0.48
CSMD1-209ENST00000520630 STRN4Q9NRL3 753 aa12.07□□□□□ -0.48
CSMD1-209ENST00000520630 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
CSMD1-209ENST00000520630 C1QTNF8P60827 252 aa12.06□□□□□ -0.48
CSMD1-209ENST00000520630 PROM2Q8N271 834 aa12.06□□□□□ -0.48
CSMD1-209ENST00000520630 HIRIP3Q9BW71 556 aaPredicted RBP12.06□□□□□ -0.48
CSMD1-209ENST00000520630 USP35Q9P2H5 1018 aa12.06□□□□□ -0.48
CSMD1-209ENST00000520630 ATP7BP35670 1465 aa12.06□□□□□ -0.48
CSMD1-209ENST00000520630 DHX57Q6P158 1386 aaKnown RBP12.05□□□□□ -0.48
CSMD1-209ENST00000520630 LARP1Q6PKG0 1096 aaKnown RBP12.05□□□□□ -0.48
CSMD1-209ENST00000520630 QSER1Q2KHR3 1735 aa12.05□□□□□ -0.48
CSMD1-209ENST00000520630 GPRASP1Q5JY77 1395 aa12.05□□□□□ -0.48
CSMD1-209ENST00000520630 PAPPAQ13219 1627 aa12.04□□□□□ -0.48
CSMD1-209ENST00000520630 ZC3H6P61129 1189 aaKnown RBP12.04□□□□□ -0.48
CSMD1-209ENST00000520630 SGIP1Q9BQI5 828 aa12.03□□□□□ -0.48
CSMD1-209ENST00000520630 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.48
CSMD1-209ENST00000520630 BTAF1O14981 1849 aa12.02□□□□□ -0.48
CSMD1-209ENST00000520630 PLSCR1O15162 318 aa12.02□□□□□ -0.49
CSMD1-209ENST00000520630 ZBTB7AO95365 584 aa12.02□□□□□ -0.49
CSMD1-209ENST00000520630 PDE3BQ13370 1112 aa12.02□□□□□ -0.49
CSMD1-209ENST00000520630 SYT17Q9BSW7 474 aa12.02□□□□□ -0.49
CSMD1-209ENST00000520630 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
CSMD1-209ENST00000520630 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
CSMD1-209ENST00000520630 NUTM2GQ5VZR2 741 aa12.01□□□□□ -0.49
CSMD1-209ENST00000520630 FHDC1Q9C0D6 1143 aaPredicted RBP12.01□□□□□ -0.49
CSMD1-209ENST00000520630 NHSQ6T4R5 1651 aa12□□□□□ -0.49
CSMD1-209ENST00000520630 DCAF8L1A6NGE4 600 aa12□□□□□ -0.49
CSMD1-209ENST00000520630 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
CSMD1-209ENST00000520630 TCP11L2Q8N4U5 519 aa12□□□□□ -0.49
CSMD1-209ENST00000520630 ATF5Q9Y2D1 282 aaPredicted RBP12□□□□□ -0.49
CSMD1-209ENST00000520630 POGKQ9P215 609 aa11.99□□□□□ -0.49
CSMD1-209ENST00000520630 TRAK1Q9UPV9 953 aa11.99□□□□□ -0.49
CSMD1-209ENST00000520630 CPDO75976 1380 aa11.99□□□□□ -0.49
CSMD1-209ENST00000520630 OVOS2A0A0G2JMS6 1433 aa11.99□□□□□ -0.49
CSMD1-209ENST00000520630 OVOS2A0A0J9YW53 1432 aa11.99□□□□□ -0.49
CSMD1-209ENST00000520630 OVOS2Q6IE36 1432 aa11.99□□□□□ -0.49
CSMD1-209ENST00000520630 POLR3AO14802 1390 aaPredicted RBP11.98□□□□□ -0.49
CSMD1-209ENST00000520630 NGDNQ8NEJ9 315 aaKnown RBP11.98□□□□□ -0.49
CSMD1-209ENST00000520630 MPHOSPH9Q99550 1183 aa11.98□□□□□ -0.49
CSMD1-209ENST00000520630 PIK3C2AO00443 1686 aa11.97□□□□□ -0.49
CSMD1-209ENST00000520630 USP19O94966 1318 aa11.97□□□□□ -0.49
CSMD1-209ENST00000520630 THRAP3Q9Y2W1 955 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms