RNA–Protein interactions for RNA: ENST00000518700.4

MSC-AS1-203, MSC antisense RNA 1, humanhuman

TSL 5

Gene MSC-AS1, Length 470 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-203ENST00000518700 RABGEF1Q9UJ41 708 aa7.47□□□□□ -1.21
MSC-AS1-203ENST00000518700 RAPGEF6Q8TEU7 1601 aa7.47□□□□□ -1.21
MSC-AS1-203ENST00000518700 WDR7Q9Y4E6 1490 aa7.47□□□□□ -1.21
MSC-AS1-203ENST00000518700 ERBB3P21860 1342 aa7.47□□□□□ -1.21
MSC-AS1-203ENST00000518700 RSPH4AQ5TD94 716 aa7.46□□□□□ -1.22
MSC-AS1-203ENST00000518700 PRPF38BQ5VTL8 546 aaKnown RBP7.46□□□□□ -1.22
MSC-AS1-203ENST00000518700 SERPINA10Q9UK55 444 aa7.46□□□□□ -1.22
MSC-AS1-203ENST00000518700 NUP153P49790 1475 aaKnown RBP7.46□□□□□ -1.22
MSC-AS1-203ENST00000518700 GLI2P10070 1586 aa7.46□□□□□ -1.22
MSC-AS1-203ENST00000518700 ZCCHC11Q5TAX3 1644 aaKnown RBP7.45□□□□□ -1.22
MSC-AS1-203ENST00000518700 CEP162Q5TB80 1403 aa7.45□□□□□ -1.22
MSC-AS1-203ENST00000518700 CASKIN1Q8WXD9 1431 aa7.45□□□□□ -1.22
MSC-AS1-203ENST00000518700 POM121CA8CG34 1229 aa7.45□□□□□ -1.22
MSC-AS1-203ENST00000518700 ARHGAP33O14559 1287 aa7.45□□□□□ -1.22
MSC-AS1-203ENST00000518700 EPRSP07814 1512 aaKnown RBP7.45□□□□□ -1.22
MSC-AS1-203ENST00000518700 PHLDB1Q86UU1 1377 aa7.45□□□□□ -1.22
MSC-AS1-203ENST00000518700 CD109Q6YHK3 1445 aa7.44□□□□□ -1.22
MSC-AS1-203ENST00000518700 SOCS7O14512 581 aa7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 RNF40O75150 1001 aa7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 CTDSPL2Q05D32 466 aa7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 FAM98CQ17RN3 349 aaKnown RBP7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 SAMD7Q7Z3H4 446 aa7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 TSC1Q92574 1164 aa7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 GJD4Q96KN9 370 aaPredicted RBP7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 HMX1Q9NP08 348 aaPredicted RBP7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 KIF13AQ9H1H9 1805 aa7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 CCDC18Q5T9S5 1454 aa7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 TEX14Q8IWB6 1497 aa7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 FYCO1Q9BQS8 1478 aa7.43□□□□□ -1.22
MSC-AS1-203ENST00000518700 DIP2BQ9P265 1576 aa7.42□□□□□ -1.22
MSC-AS1-203ENST00000518700 CFHP08603 1231 aa7.42□□□□□ -1.22
MSC-AS1-203ENST00000518700 FUT2Q10981 343 aa7.42□□□□□ -1.22
MSC-AS1-203ENST00000518700 MTMR2Q13614 643 aa7.42□□□□□ -1.22
MSC-AS1-203ENST00000518700 WWC1Q8IX03 1113 aa7.42□□□□□ -1.22
MSC-AS1-203ENST00000518700 SLC4A5Q9BY07 1137 aa7.42□□□□□ -1.22
MSC-AS1-203ENST00000518700 PRM3Q9NNZ6 103 aa7.42□□□□□ -1.22
MSC-AS1-203ENST00000518700 VPS9D1Q9Y2B5 631 aa7.42□□□□□ -1.22
MSC-AS1-203ENST00000518700 HECW1Q76N89 1606 aa7.41□□□□□ -1.22
MSC-AS1-203ENST00000518700 CFAP99D6REC4 459 aa7.41□□□□□ -1.22
MSC-AS1-203ENST00000518700 PDIA4P13667 645 aaKnown RBP7.41□□□□□ -1.22
MSC-AS1-203ENST00000518700 HDGFP51858 240 aaKnown RBP7.41□□□□□ -1.22
MSC-AS1-203ENST00000518700 SLF2Q8IX21 1173 aa7.41□□□□□ -1.22
MSC-AS1-203ENST00000518700 LRRN4Q8WUT4 740 aa7.41□□□□□ -1.22
MSC-AS1-203ENST00000518700 NDUFB9Q9Y6M9 179 aa7.41□□□□□ -1.22
MSC-AS1-203ENST00000518700 C6orf229H3BNL8 230 aa7.4□□□□□ -1.22
MSC-AS1-203ENST00000518700 IRF5Q13568 498 aa7.4□□□□□ -1.22
MSC-AS1-203ENST00000518700 EFCAB2Q5VUJ9 269 aa7.4□□□□□ -1.22
MSC-AS1-203ENST00000518700 SYMPKQ92797 1274 aaKnown RBP7.4□□□□□ -1.22
MSC-AS1-203ENST00000518700 GLMNQ92990 594 aa7.4□□□□□ -1.22
MSC-AS1-203ENST00000518700 MARVELD3Q96A59 401 aa7.4□□□□□ -1.22
MSC-AS1-203ENST00000518700 CALR3Q96L12 384 aaKnown RBP7.4□□□□□ -1.22
MSC-AS1-203ENST00000518700 TRIM34Q9BYJ4 488 aa7.4□□□□□ -1.22
MSC-AS1-203ENST00000518700 MAGI3Q5TCQ9 1506 aa7.4□□□□□ -1.22
MSC-AS1-203ENST00000518700 TROQ12816 1431 aaPredicted RBP7.39□□□□□ -1.23
MSC-AS1-203ENST00000518700 ST18O60284 1047 aa7.39□□□□□ -1.23
MSC-AS1-203ENST00000518700 GPR37L1O60883 481 aa7.39□□□□□ -1.23
MSC-AS1-203ENST00000518700 SLC4A3P48751 1232 aa7.39□□□□□ -1.23
MSC-AS1-203ENST00000518700 EMP3P54852 163 aa7.39□□□□□ -1.23
MSC-AS1-203ENST00000518700 HELBQ8NG08 1087 aaPredicted RBP7.39□□□□□ -1.23
MSC-AS1-203ENST00000518700 VPS8Q8N3P4 1428 aa7.38□□□□□ -1.23
MSC-AS1-203ENST00000518700 FAM205CA6NFA0 338 aa7.38□□□□□ -1.23
MSC-AS1-203ENST00000518700 PBX2P40425 430 aa7.38□□□□□ -1.23
MSC-AS1-203ENST00000518700 CFAP43Q8NDM7 1665 aa7.38□□□□□ -1.23
MSC-AS1-203ENST00000518700 MAP3K4Q9Y6R4 1608 aa7.38□□□□□ -1.23
MSC-AS1-203ENST00000518700 TSPOAP1O95153 1857 aa7.37□□□□□ -1.23
MSC-AS1-203ENST00000518700 GRIPAP1Q4V328 841 aa7.37□□□□□ -1.23
MSC-AS1-203ENST00000518700 ADAMTS19Q8TE59 1207 aa7.37□□□□□ -1.23
MSC-AS1-203ENST00000518700 EPS8L1Q8TE68 723 aa7.37□□□□□ -1.23
MSC-AS1-203ENST00000518700 NBPF3Q9H094 633 aa7.37□□□□□ -1.23
MSC-AS1-203ENST00000518700 ABCA9Q8IUA7 1624 aa7.37□□□□□ -1.23
MSC-AS1-203ENST00000518700 CDK13Q14004 1512 aaKnown RBP7.37□□□□□ -1.23
MSC-AS1-203ENST00000518700 PLCH2O75038 1416 aa7.36□□□□□ -1.23
MSC-AS1-203ENST00000518700 MTUS2Q5JR59 1369 aa7.36□□□□□ -1.23
MSC-AS1-203ENST00000518700 ATP6V1AP38606 617 aa7.36□□□□□ -1.23
MSC-AS1-203ENST00000518700 VAC14Q08AM6 782 aa7.36□□□□□ -1.23
MSC-AS1-203ENST00000518700 PUS10Q3MIT2 529 aaKnown RBP7.36□□□□□ -1.23
MSC-AS1-203ENST00000518700 LAPTM4BQ86VI4 370 aa7.36□□□□□ -1.23
MSC-AS1-203ENST00000518700 ZNF687Q8N1G0 1237 aa7.36□□□□□ -1.23
MSC-AS1-203ENST00000518700 NECTIN2Q92692 538 aa7.36□□□□□ -1.23
MSC-AS1-203ENST00000518700 ZFRQ96KR1 1074 aaKnown RBP7.36□□□□□ -1.23
MSC-AS1-203ENST00000518700 NEO1Q92859 1461 aa7.36□□□□□ -1.23
MSC-AS1-203ENST00000518700 BHMG1C9JSJ3 638 aaPredicted RBP7.35□□□□□ -1.23
MSC-AS1-203ENST00000518700 KMT5BQ4FZB7 885 aa7.35□□□□□ -1.23
MSC-AS1-203ENST00000518700 PRR7Q8TB68 274 aa7.35□□□□□ -1.23
MSC-AS1-203ENST00000518700 MAP3K1Q13233 1512 aa7.35□□□□□ -1.23
MSC-AS1-203ENST00000518700 ARAP3Q8WWN8 1544 aa7.35□□□□□ -1.23
MSC-AS1-203ENST00000518700 PCF11O94913 1555 aaKnown RBP7.34□□□□□ -1.23
MSC-AS1-203ENST00000518700 POTEB3A0JP26 581 aa7.34□□□□□ -1.23
MSC-AS1-203ENST00000518700 PER1O15534 1290 aaPredicted RBP7.34□□□□□ -1.23
MSC-AS1-203ENST00000518700 HDGFL1Q5TGJ6 251 aa7.34□□□□□ -1.23
MSC-AS1-203ENST00000518700 POTEBQ6S5H4 581 aa7.34□□□□□ -1.23
MSC-AS1-203ENST00000518700 RETREG2Q8NC44 543 aa7.34□□□□□ -1.23
MSC-AS1-203ENST00000518700 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.33□□□□□ -1.24
MSC-AS1-203ENST00000518700 FANCAO15360 1455 aa7.33□□□□□ -1.24
MSC-AS1-203ENST00000518700 NR6A1Q15406 480 aa7.33□□□□□ -1.24
MSC-AS1-203ENST00000518700 MORN1Q5T089 497 aa7.33□□□□□ -1.24
MSC-AS1-203ENST00000518700 MRPL50Q8N5N7 158 aaKnown RBP7.33□□□□□ -1.24
MSC-AS1-203ENST00000518700 CFDP1Q9UEE9 299 aaPredicted RBP7.33□□□□□ -1.24
MSC-AS1-203ENST00000518700 AKNAQ7Z591 1439 aa7.33□□□□□ -1.24
MSC-AS1-203ENST00000518700 CCNB3Q8WWL7 1395 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms