RNA–Protein interactions for RNA: ENST00000518136.3

HOXA13-202, Transcript of homeobox A13, humanhuman

TSL 2

Gene HOXA13, Length 871 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-202ENST00000518136 NRXN3Q9Y4C0 1643 aa12□□□□□ -0.49
HOXA13-202ENST00000518136 E2F4Q16254 413 aa12□□□□□ -0.49
HOXA13-202ENST00000518136 ZFYVE9O95405 1425 aa12□□□□□ -0.49
HOXA13-202ENST00000518136 RGL3Q3MIN7 710 aa11.99□□□□□ -0.49
HOXA13-202ENST00000518136 SLC52A1Q9NWF4 448 aa11.99□□□□□ -0.49
HOXA13-202ENST00000518136 IQGAP1P46940 1657 aa11.99□□□□□ -0.49
HOXA13-202ENST00000518136 RALGAPBQ86X10 1494 aa11.98□□□□□ -0.49
HOXA13-202ENST00000518136 LAMC1P11047 1609 aa11.97□□□□□ -0.49
HOXA13-202ENST00000518136 ARHGAP23Q9P227 1491 aa11.97□□□□□ -0.49
HOXA13-202ENST00000518136 DCAF11Q8TEB1 546 aa11.97□□□□□ -0.49
HOXA13-202ENST00000518136 SLIT1O75093 1534 aa11.96□□□□□ -0.49
HOXA13-202ENST00000518136 ASXL1Q8IXJ9 1541 aa11.96□□□□□ -0.5
HOXA13-202ENST00000518136 PIK3C2GO75747 1445 aa11.95□□□□□ -0.5
HOXA13-202ENST00000518136 POLR1AO95602 1720 aaPredicted RBP11.95□□□□□ -0.5
HOXA13-202ENST00000518136 ADGRF5Q8IZF2 1346 aa11.95□□□□□ -0.5
HOXA13-202ENST00000518136 CAMK2BQ13554 666 aa11.95□□□□□ -0.5
HOXA13-202ENST00000518136 RIMS2Q9UQ26 1411 aa11.94□□□□□ -0.5
HOXA13-202ENST00000518136 ADGRB1O14514 1584 aa11.93□□□□□ -0.5
HOXA13-202ENST00000518136 SNPHO15079 494 aa11.93□□□□□ -0.5
HOXA13-202ENST00000518136 TMEM2Q9UHN6 1383 aa11.92□□□□□ -0.5
HOXA13-202ENST00000518136 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
HOXA13-202ENST00000518136 DOK7Q18PE1 504 aa11.92□□□□□ -0.5
HOXA13-202ENST00000518136 KCNV2Q8TDN2 545 aa11.92□□□□□ -0.5
HOXA13-202ENST00000518136 RPGRIP1LQ68CZ1 1315 aa11.91□□□□□ -0.5
HOXA13-202ENST00000518136 ALKQ9UM73 1620 aa11.91□□□□□ -0.5
HOXA13-202ENST00000518136 ZNF326Q5BKZ1 582 aaKnown RBP11.91□□□□□ -0.5
HOXA13-202ENST00000518136 NUTM2DQ5VT03 806 aaPredicted RBP11.91□□□□□ -0.5
HOXA13-202ENST00000518136 EMILIN3Q9NT22 766 aa11.91□□□□□ -0.5
HOXA13-202ENST00000518136 ARHGEF28Q8N1W1 1705 aaKnown RBP11.91□□□□□ -0.5
HOXA13-202ENST00000518136 GPRASP1Q5JY77 1395 aa11.91□□□□□ -0.5
HOXA13-202ENST00000518136 SLC34A2O95436 690 aa11.9□□□□□ -0.5
HOXA13-202ENST00000518136 HOXB3P14651 431 aaPredicted RBP11.9□□□□□ -0.5
HOXA13-202ENST00000518136 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.5
HOXA13-202ENST00000518136 LMTK3Q96Q04 1460 aa11.89□□□□□ -0.51
HOXA13-202ENST00000518136 NBPF1Q3BBV0 1214 aa11.89□□□□□ -0.51
HOXA13-202ENST00000518136 STRCQ7RTU9 1775 aa11.89□□□□□ -0.51
HOXA13-202ENST00000518136 LTKP29376 864 aa11.88□□□□□ -0.51
HOXA13-202ENST00000518136 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
HOXA13-202ENST00000518136 MED14O60244 1454 aa11.88□□□□□ -0.51
HOXA13-202ENST00000518136 ADAMTS13Q76LX8 1427 aa11.87□□□□□ -0.51
HOXA13-202ENST00000518136 KNDC1Q76NI1 1749 aa11.87□□□□□ -0.51
HOXA13-202ENST00000518136 RIMBP2O15034 1052 aa11.87□□□□□ -0.51
HOXA13-202ENST00000518136 TBC1D12O60347 775 aa11.87□□□□□ -0.51
HOXA13-202ENST00000518136 MAP3K9P80192 1104 aa11.87□□□□□ -0.51
HOXA13-202ENST00000518136 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
HOXA13-202ENST00000518136 PTCD2Q8WV60 388 aaKnown RBP11.87□□□□□ -0.51
HOXA13-202ENST00000518136 CFAP70Q5T0N1 1121 aa11.86□□□□□ -0.51
HOXA13-202ENST00000518136 OXER1Q8TDS5 423 aa11.86□□□□□ -0.51
HOXA13-202ENST00000518136 STAC3Q96MF2 364 aa11.86□□□□□ -0.51
HOXA13-202ENST00000518136 SCAF11Q99590 1463 aaKnown RBP11.86□□□□□ -0.51
HOXA13-202ENST00000518136 DPYSL4O14531 572 aa11.85□□□□□ -0.51
HOXA13-202ENST00000518136 QRICH2Q9H0J4 1663 aa11.84□□□□□ -0.51
HOXA13-202ENST00000518136 CHD2O14647 1828 aaKnown RBP11.84□□□□□ -0.51
HOXA13-202ENST00000518136 ROCK2O75116 1388 aaKnown RBP11.84□□□□□ -0.51
HOXA13-202ENST00000518136 PLEKHG1Q9ULL1 1385 aa11.84□□□□□ -0.51
HOXA13-202ENST00000518136 C14orf93Q9H972 538 aaKnown RBP11.84□□□□□ -0.51
HOXA13-202ENST00000518136 ARIH1Q9Y4X5 557 aaPredicted RBP11.84□□□□□ -0.51
HOXA13-202ENST00000518136 PCDHGA4Q9Y5G9 962 aa11.84□□□□□ -0.51
HOXA13-202ENST00000518136 DIP2AQ14689 1571 aa11.84□□□□□ -0.51
HOXA13-202ENST00000518136 XRN1Q8IZH2 1706 aaKnown RBP11.83□□□□□ -0.52
HOXA13-202ENST00000518136 USP47Q96K76 1375 aa11.83□□□□□ -0.52
HOXA13-202ENST00000518136 STRCP1A6NGW2 1772 aa11.82□□□□□ -0.52
HOXA13-202ENST00000518136 HSPA5P11021 654 aaKnown RBP11.82□□□□□ -0.52
HOXA13-202ENST00000518136 THEMISQ8N1K5 641 aaPredicted RBP11.82□□□□□ -0.52
HOXA13-202ENST00000518136 ZSWIM6Q9HCJ5 1215 aa11.82□□□□□ -0.52
HOXA13-202ENST00000518136 METP08581 1390 aa11.81□□□□□ -0.52
HOXA13-202ENST00000518136 HIRIP3Q9BW71 556 aaPredicted RBP11.81□□□□□ -0.52
HOXA13-202ENST00000518136 PTPRUQ92729 1446 aa11.8□□□□□ -0.52
HOXA13-202ENST00000518136 ARSIQ5FYB1 569 aa11.8□□□□□ -0.52
HOXA13-202ENST00000518136 TXNDC2Q86VQ3 553 aa11.8□□□□□ -0.52
HOXA13-202ENST00000518136 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.8□□□□□ -0.52
HOXA13-202ENST00000518136 CARD11Q9BXL7 1154 aa11.8□□□□□ -0.52
HOXA13-202ENST00000518136 CPS1P31327 1500 aa11.8□□□□□ -0.52
HOXA13-202ENST00000518136 TMEM132EQ6IEE7 984 aa11.79□□□□□ -0.52
HOXA13-202ENST00000518136 FAM163AQ96GL9 167 aaPredicted RBP11.79□□□□□ -0.52
HOXA13-202ENST00000518136 YTHDC2Q9H6S0 1430 aaKnown RBP11.78□□□□□ -0.52
HOXA13-202ENST00000518136 DLC1Q96QB1 1528 aa11.78□□□□□ -0.52
HOXA13-202ENST00000518136 GPR153Q6NV75 609 aa11.78□□□□□ -0.52
HOXA13-202ENST00000518136 MYOM1P52179 1685 aa11.78□□□□□ -0.52
HOXA13-202ENST00000518136 NPHP4O75161 1426 aaPredicted RBP11.77□□□□□ -0.52
HOXA13-202ENST00000518136 NWD1Q149M9 1564 aa11.77□□□□□ -0.53
HOXA13-202ENST00000518136 EVI5O60447 810 aa11.77□□□□□ -0.53
HOXA13-202ENST00000518136 HSPA2P54652 639 aa11.77□□□□□ -0.53
HOXA13-202ENST00000518136 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.53
HOXA13-202ENST00000518136 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.77□□□□□ -0.53
HOXA13-202ENST00000518136 TECPR2O15040 1411 aa11.77□□□□□ -0.53
HOXA13-202ENST00000518136 SPDYE16A6NNV3 312 aaPredicted RBP11.76□□□□□ -0.53
HOXA13-202ENST00000518136 C11orf95C9JLR9 678 aaPredicted RBP11.76□□□□□ -0.53
HOXA13-202ENST00000518136 EIF4G2P78344 907 aaKnown RBP eCLIP11.76□□□□□ -0.53
HOXA13-202ENST00000518136 NBR1Q14596 966 aa11.76□□□□□ -0.53
HOXA13-202ENST00000518136 TESK2Q96S53 571 aa11.76□□□□□ -0.53
HOXA13-202ENST00000518136 LRPPRCP42704 1394 aaKnown RBP11.76□□□□□ -0.53
HOXA13-202ENST00000518136 XIRP1Q702N8 1843 aaKnown RBP11.75□□□□□ -0.53
HOXA13-202ENST00000518136 ZNF316A6NFI3 1004 aaPredicted RBP11.75□□□□□ -0.53
HOXA13-202ENST00000518136 ST18O60284 1047 aa11.75□□□□□ -0.53
HOXA13-202ENST00000518136 TULP4Q9NRJ4 1543 aa11.75□□□□□ -0.53
HOXA13-202ENST00000518136 ST20-MTHFSA0A0A6YYL1 179 aa11.74□□□□□ -0.53
HOXA13-202ENST00000518136 NUDT7P0C024 238 aa11.74□□□□□ -0.53
HOXA13-202ENST00000518136 HOXB1P14653 301 aaPredicted RBP11.74□□□□□ -0.53
HOXA13-202ENST00000518136 PDIA6Q15084 440 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms