RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 CTHP32929 405 aa3.72□□□□□ -1.81
RNU6-1041P-201ENST00000516254 EIF4G2P78344 907 aaKnown RBP eCLIP3.72□□□□□ -1.81
RNU6-1041P-201ENST00000516254 PTK2Q05397 1052 aa3.72□□□□□ -1.81
RNU6-1041P-201ENST00000516254 PDXDC2PQ6P474 469 aa3.72□□□□□ -1.81
RNU6-1041P-201ENST00000516254 CCDC97Q96F63 343 aaPredicted RBP3.72□□□□□ -1.81
RNU6-1041P-201ENST00000516254 NR1H3Q13133 447 aa3.71□□□□□ -1.82
RNU6-1041P-201ENST00000516254 IRF5Q13568 498 aa3.71□□□□□ -1.82
RNU6-1041P-201ENST00000516254 CALR3Q96L12 384 aaKnown RBP3.71□□□□□ -1.82
RNU6-1041P-201ENST00000516254 ZNF777Q9ULD5 760 aaPredicted RBP3.71□□□□□ -1.82
RNU6-1041P-201ENST00000516254 ZBBXA8MT70 800 aa3.7□□□□□ -1.82
RNU6-1041P-201ENST00000516254 ZBTB24O43167 697 aaPredicted RBP3.7□□□□□ -1.82
RNU6-1041P-201ENST00000516254 SEMA3FQ13275 785 aa3.7□□□□□ -1.82
RNU6-1041P-201ENST00000516254 IFFO2Q5TF58 517 aa3.7□□□□□ -1.82
RNU6-1041P-201ENST00000516254 CCDC125Q86Z20 511 aa3.7□□□□□ -1.82
RNU6-1041P-201ENST00000516254 HOMEZQ8IX15 550 aa3.7□□□□□ -1.82
RNU6-1041P-201ENST00000516254 ZNF516Q92618 1163 aa3.7□□□□□ -1.82
RNU6-1041P-201ENST00000516254 TRIM52Q96A61 297 aa3.7□□□□□ -1.82
RNU6-1041P-201ENST00000516254 TLL1O43897 1013 aa3.69□□□□□ -1.82
RNU6-1041P-201ENST00000516254 PPP1R15AO75807 674 aaPredicted RBP3.69□□□□□ -1.82
RNU6-1041P-201ENST00000516254 PDE4CQ08493 712 aa3.69□□□□□ -1.82
RNU6-1041P-201ENST00000516254 ANKLE1Q8NAG6 615 aa3.69□□□□□ -1.82
RNU6-1041P-201ENST00000516254 EPS8L1Q8TE68 723 aa3.69□□□□□ -1.82
RNU6-1041P-201ENST00000516254 GLMNQ92990 594 aa3.69□□□□□ -1.82
RNU6-1041P-201ENST00000516254 UNC93B1Q9H1C4 597 aa3.69□□□□□ -1.82
RNU6-1041P-201ENST00000516254 ARID3CA6NKF2 412 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 LZTS3O60299 673 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 GPR37L1O60883 481 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 S1PR4O95977 384 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 RPIAP49247 311 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 HDGFL1Q5TGJ6 251 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 ZBTB33Q86T24 672 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 BPHLQ86WA6 291 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 CCDC24Q8N4L8 307 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 CCDC82Q8N4S0 544 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 NFATC2IPQ8NCF5 419 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 ALG2Q9H553 416 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 PRDM9Q9NQV7 894 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 MAP10Q9P2G4 905 aa3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 CDV3Q9UKY7 258 aaKnown RBP3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 FCF1Q9Y324 198 aaKnown RBP3.68□□□□□ -1.82
RNU6-1041P-201ENST00000516254 CD2BP2O95400 341 aaKnown RBP3.67□□□□□ -1.82
RNU6-1041P-201ENST00000516254 FBXO45P0C2W1 286 aa3.67□□□□□ -1.82
RNU6-1041P-201ENST00000516254 WNT7BP56706 349 aa3.67□□□□□ -1.82
RNU6-1041P-201ENST00000516254 VAC14Q08AM6 782 aa3.67□□□□□ -1.82
RNU6-1041P-201ENST00000516254 ARHGAP9Q9BRR9 750 aa3.67□□□□□ -1.82
RNU6-1041P-201ENST00000516254 C1orf115Q9H7X2 142 aa3.67□□□□□ -1.82
RNU6-1041P-201ENST00000516254 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.67□□□□□ -1.82
RNU6-1041P-201ENST00000516254 ACIN1Q9UKV3 1341 aaKnown RBP3.67□□□□□ -1.82
RNU6-1041P-201ENST00000516254 POM121CA8CG34 1229 aa3.66□□□□□ -1.82
RNU6-1041P-201ENST00000516254 RNF223E7ERA6 249 aa3.66□□□□□ -1.82
RNU6-1041P-201ENST00000516254 AGERQ15109 404 aa3.66□□□□□ -1.82
RNU6-1041P-201ENST00000516254 RNF20Q5VTR2 975 aa3.66□□□□□ -1.82
RNU6-1041P-201ENST00000516254 SH3BP5LQ7L8J4 393 aa3.66□□□□□ -1.82
RNU6-1041P-201ENST00000516254 ZNF511Q8NB15 262 aa3.66□□□□□ -1.82
RNU6-1041P-201ENST00000516254 NKX2-3Q8TAU0 364 aa3.66□□□□□ -1.82
RNU6-1041P-201ENST00000516254 VARSP26640 1264 aaKnown RBP3.65□□□□□ -1.83
RNU6-1041P-201ENST00000516254 NBPF20Q3BBV1 942 aa3.65□□□□□ -1.83
RNU6-1041P-201ENST00000516254 MAP7D1Q3KQU3 841 aa3.65□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PTCRAQ6ISU1 281 aaPredicted RBP3.65□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PPP1R18Q6NYC8 613 aa3.65□□□□□ -1.83
RNU6-1041P-201ENST00000516254 SH3RF1Q7Z6J0 888 aa3.65□□□□□ -1.83
RNU6-1041P-201ENST00000516254 SEPT12Q8IYM1 358 aa3.65□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ADAM32Q8TC27 787 aa3.65□□□□□ -1.83
RNU6-1041P-201ENST00000516254 BAP1Q92560 729 aa3.65□□□□□ -1.83
RNU6-1041P-201ENST00000516254 TRIM32Q13049 653 aa3.64□□□□□ -1.83
RNU6-1041P-201ENST00000516254 SLFNL1Q499Z3 407 aa3.64□□□□□ -1.83
RNU6-1041P-201ENST00000516254 DZIP3Q86Y13 1208 aaKnown RBP3.64□□□□□ -1.83
RNU6-1041P-201ENST00000516254 TRMT44Q8IYL2 757 aaKnown RBP3.64□□□□□ -1.83
RNU6-1041P-201ENST00000516254 MPNDQ8N594 471 aa3.64□□□□□ -1.83
RNU6-1041P-201ENST00000516254 FAM174AQ8TBP5 190 aa3.64□□□□□ -1.83
RNU6-1041P-201ENST00000516254 SIRT1Q96EB6 747 aa3.64□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ARID3AQ99856 593 aa3.64□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PPP1R12CQ9BZL4 782 aa3.64□□□□□ -1.83
RNU6-1041P-201ENST00000516254 CEP126Q9P2H0 1117 aa3.64□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PCDHB9Q9Y5E1 797 aa3.64□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PALM3A6NDB9 673 aaPredicted RBP3.63□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ATP9BO43861 1147 aa3.63□□□□□ -1.83
RNU6-1041P-201ENST00000516254 SH3BP2P78314 561 aa3.63□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PLEKHM2Q8IWE5 1019 aa3.63□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ADAMTS19Q8TE59 1207 aa3.63□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PBXIP1Q96AQ6 731 aa3.63□□□□□ -1.83
RNU6-1041P-201ENST00000516254 SLC10A4Q96EP9 437 aa3.63□□□□□ -1.83
RNU6-1041P-201ENST00000516254 C1QTNF2Q9BXJ5 285 aa3.63□□□□□ -1.83
RNU6-1041P-201ENST00000516254 MAP4K5Q9Y4K4 846 aa3.63□□□□□ -1.83
RNU6-1041P-201ENST00000516254 MAGEB6P1A0A0J9YX57 407 aa3.62□□□□□ -1.83
RNU6-1041P-201ENST00000516254 DHX9Q08211 1270 aaKnown RBP3.62□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ERFEQ4G0M1 354 aa3.62□□□□□ -1.83
RNU6-1041P-201ENST00000516254 RNF135Q8IUD6 432 aa3.62□□□□□ -1.83
RNU6-1041P-201ENST00000516254 OCSTAMPQ9BR26 566 aa3.62□□□□□ -1.83
RNU6-1041P-201ENST00000516254 VRTNQ9H8Y1 702 aa3.62□□□□□ -1.83
RNU6-1041P-201ENST00000516254 TFIP11Q9UBB9 837 aaKnown RBP3.62□□□□□ -1.83
RNU6-1041P-201ENST00000516254 CHIC2Q9UKJ5 165 aa3.62□□□□□ -1.83
RNU6-1041P-201ENST00000516254 ATP5J2-PTCD1G3V325 749 aa3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 PPEF1O14829 653 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 SKIP12755 728 aa3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 LMOD1P29536 600 aaPredicted RBP3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 SLC19A1P41440 591 aa3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 LINC01559Q495D7 138 aa3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 CFAP70Q5T0N1 1121 aa3.61□□□□□ -1.83
RNU6-1041P-201ENST00000516254 TRIM50Q86XT4 487 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms