RNA–Protein interactions for RNA: ENST00000516173.1

RN7SKP43-201, Transcript of RNA, 7SK small nuclear pseudogene 43, humanhuman

BASIC

Gene RN7SKP43, Length 320 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP43-201ENST00000516173 ARHGAP35Q9NRY4 1499 aa4.42□□□□□ -1.7
RN7SKP43-201ENST00000516173 ABCA10Q8WWZ4 1543 aa4.41□□□□□ -1.7
RN7SKP43-201ENST00000516173 CCNB3Q8WWL7 1395 aa4.41□□□□□ -1.7
RN7SKP43-201ENST00000516173 TIAM1Q13009 1591 aa4.41□□□□□ -1.7
RN7SKP43-201ENST00000516173 GRXCR2A6NFK2 248 aa4.41□□□□□ -1.7
RN7SKP43-201ENST00000516173 SLC10A3P09131 477 aa4.41□□□□□ -1.7
RN7SKP43-201ENST00000516173 KRT76Q01546 638 aa4.41□□□□□ -1.7
RN7SKP43-201ENST00000516173 FAM160A2Q8N612 972 aaPredicted RBP4.41□□□□□ -1.7
RN7SKP43-201ENST00000516173 DHX57Q6P158 1386 aaKnown RBP4.4□□□□□ -1.7
RN7SKP43-201ENST00000516173 SOBPA7XYQ1 873 aa4.4□□□□□ -1.71
RN7SKP43-201ENST00000516173 PROCP04070 461 aa4.4□□□□□ -1.71
RN7SKP43-201ENST00000516173 RC3H1Q5TC82 1133 aaKnown RBP4.4□□□□□ -1.71
RN7SKP43-201ENST00000516173 THAP11Q96EK4 314 aa4.4□□□□□ -1.71
RN7SKP43-201ENST00000516173 CNTNAP3BQ96NU0 1288 aa4.4□□□□□ -1.71
RN7SKP43-201ENST00000516173 CNTNAP3Q9BZ76 1288 aa4.4□□□□□ -1.71
RN7SKP43-201ENST00000516173 FGD5Q6ZNL6 1462 aa4.4□□□□□ -1.71
RN7SKP43-201ENST00000516173 CFAP43Q8NDM7 1665 aa4.4□□□□□ -1.71
RN7SKP43-201ENST00000516173 KIF21AQ7Z4S6 1674 aa4.39□□□□□ -1.71
RN7SKP43-201ENST00000516173 LRRC9Q6ZRR7 1453 aa4.39□□□□□ -1.71
RN7SKP43-201ENST00000516173 FANCD2Q9BXW9 1451 aa4.39□□□□□ -1.71
RN7SKP43-201ENST00000516173 FMNL1O95466 1100 aaPredicted RBP4.39□□□□□ -1.71
RN7SKP43-201ENST00000516173 NEUROD1Q13562 356 aa4.39□□□□□ -1.71
RN7SKP43-201ENST00000516173 NPDC1Q9NQX5 325 aaPredicted RBP4.39□□□□□ -1.71
RN7SKP43-201ENST00000516173 FMN1Q68DA7 1419 aa4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 FYCO1Q9BQS8 1478 aa4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 PPFIA3O75145 1194 aa4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 ARHGEF15O94989 841 aa4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 OSBPP22059 807 aa4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 KANK4Q5T7N3 995 aaPredicted RBP4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 CADPS2Q86UW7 1296 aa4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 RBM46Q8TBY0 533 aaKnown RBP4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 WASF2Q9Y6W5 498 aa4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 THOC2Q8NI27 1593 aaKnown RBP4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 WDR97A6NE52 1622 aa4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 CASKIN1Q8WXD9 1431 aa4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 SETD5Q9C0A6 1442 aa4.38□□□□□ -1.71
RN7SKP43-201ENST00000516173 TOPBP1Q92547 1522 aa4.37□□□□□ -1.71
RN7SKP43-201ENST00000516173 WNT7BP56706 349 aa4.37□□□□□ -1.71
RN7SKP43-201ENST00000516173 SCARF1Q14162 830 aa4.37□□□□□ -1.71
RN7SKP43-201ENST00000516173 MSS51Q4VC12 460 aa4.37□□□□□ -1.71
RN7SKP43-201ENST00000516173 PDS5BQ9NTI5 1447 aa4.37□□□□□ -1.71
RN7SKP43-201ENST00000516173 RCCD1A6NED2 376 aa4.36□□□□□ -1.71
RN7SKP43-201ENST00000516173 GTPBP6O43824 516 aaPredicted RBP4.36□□□□□ -1.71
RN7SKP43-201ENST00000516173 ITGB2P05107 769 aa4.36□□□□□ -1.71
RN7SKP43-201ENST00000516173 SKOR1P84550 965 aa4.36□□□□□ -1.71
RN7SKP43-201ENST00000516173 MORN1Q5T089 497 aa4.36□□□□□ -1.71
RN7SKP43-201ENST00000516173 MRPL14Q6P1L8 145 aaKnown RBP4.36□□□□□ -1.71
RN7SKP43-201ENST00000516173 PURBQ96QR8 312 aaKnown RBP4.36□□□□□ -1.71
RN7SKP43-201ENST00000516173 GTF3C3Q9Y5Q9 886 aa4.36□□□□□ -1.71
RN7SKP43-201ENST00000516173 TTBK1Q5TCY1 1321 aaPredicted RBP4.36□□□□□ -1.71
RN7SKP43-201ENST00000516173 WHAMMQ8TF30 809 aa4.35□□□□□ -1.71
RN7SKP43-201ENST00000516173 DCAF5Q96JK2 942 aa4.35□□□□□ -1.71
RN7SKP43-201ENST00000516173 POLA1P09884 1462 aaPredicted RBP4.35□□□□□ -1.71
RN7SKP43-201ENST00000516173 SAMD9Q5K651 1589 aa4.35□□□□□ -1.71
RN7SKP43-201ENST00000516173 ABCA5Q8WWZ7 1642 aa4.35□□□□□ -1.71
RN7SKP43-201ENST00000516173 SUPT6HQ7KZ85 1726 aaKnown RBP4.35□□□□□ -1.71
RN7SKP43-201ENST00000516173 MAN1A2O60476 641 aa4.34□□□□□ -1.71
RN7SKP43-201ENST00000516173 FECHP22830 423 aa4.34□□□□□ -1.71
RN7SKP43-201ENST00000516173 RSPH4AQ5TD94 716 aa4.34□□□□□ -1.71
RN7SKP43-201ENST00000516173 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.71
RN7SKP43-201ENST00000516173 GPR161Q8N6U8 529 aaKnown RBP4.34□□□□□ -1.71
RN7SKP43-201ENST00000516173 COL25A1Q9BXS0 654 aaPredicted RBP4.34□□□□□ -1.71
RN7SKP43-201ENST00000516173 SALL2Q9Y467 1007 aaPredicted RBP4.34□□□□□ -1.71
RN7SKP43-201ENST00000516173 CCDC18Q5T9S5 1454 aa4.33□□□□□ -1.72
RN7SKP43-201ENST00000516173 RAB3GAP2Q9H2M9 1393 aa4.33□□□□□ -1.72
RN7SKP43-201ENST00000516173 SLURP2P0DP57 97 aa4.33□□□□□ -1.72
RN7SKP43-201ENST00000516173 RANGAP1P46060 587 aaPredicted RBP4.33□□□□□ -1.72
RN7SKP43-201ENST00000516173 PCF11O94913 1555 aaKnown RBP4.32□□□□□ -1.72
RN7SKP43-201ENST00000516173 GAPVD1Q14C86 1478 aa4.32□□□□□ -1.72
RN7SKP43-201ENST00000516173 SIAH2O43255 324 aa4.32□□□□□ -1.72
RN7SKP43-201ENST00000516173 PPP1R15AO75807 674 aaPredicted RBP4.32□□□□□ -1.72
RN7SKP43-201ENST00000516173 SLC27A5Q9Y2P5 690 aa4.32□□□□□ -1.72
RN7SKP43-201ENST00000516173 ADGRG1Q9Y653 693 aa4.32□□□□□ -1.72
RN7SKP43-201ENST00000516173 HFM1A2PYH4 1435 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 AKNAQ7Z591 1439 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 MIA2Q96PC5 1412 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 UACAQ9BZF9 1416 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 PHLDB1Q86UU1 1377 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 PHF20L1A8MW92 1017 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 CCER2I3L3R5 266 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 BAG6P46379 1132 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 MMP16P51512 607 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 BRICD5Q6PL45 260 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 EHBP1Q8NDI1 1231 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 LRRIQ1Q96JM4 1722 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 PBRM1Q86U86 1689 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 TARBP1Q13395 1621 aaKnown RBP4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 MAPKBP1O60336 1514 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 URB2Q14146 1524 aaKnown RBP4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 EHBP1L1Q8N3D4 1523 aa4.31□□□□□ -1.72
RN7SKP43-201ENST00000516173 SNAPC4Q5SXM2 1469 aa4.3□□□□□ -1.72
RN7SKP43-201ENST00000516173 RAD54L2Q9Y4B4 1467 aa4.3□□□□□ -1.72
RN7SKP43-201ENST00000516173 FGD6Q6ZV73 1430 aa4.3□□□□□ -1.72
RN7SKP43-201ENST00000516173 MTUS2Q5JR59 1369 aa4.3□□□□□ -1.72
RN7SKP43-201ENST00000516173 FUT2Q10981 343 aa4.3□□□□□ -1.72
RN7SKP43-201ENST00000516173 RNFT1Q5M7Z0 435 aa4.3□□□□□ -1.72
RN7SKP43-201ENST00000516173 GOLGA2P5Q9HBQ8 144 aa4.3□□□□□ -1.72
RN7SKP43-201ENST00000516173 GRIN2BQ13224 1484 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms