RNA–Protein interactions for RNA: ENST00000515885.5

LINC00461-216, long intergenic non-protein coding RNA 461, humanhuman

TSL 5

Gene LINC00461, Length 719 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-216ENST00000515885 PTPREP23469 700 aa11.92□□□□□ -0.5
LINC00461-216ENST00000515885 PRR7Q8TB68 274 aa11.92□□□□□ -0.5
LINC00461-216ENST00000515885 TFIP11Q9UBB9 837 aaKnown RBP11.92□□□□□ -0.5
LINC00461-216ENST00000515885 IVNS1ABPQ9Y6Y0 642 aa11.92□□□□□ -0.5
LINC00461-216ENST00000515885 BIVM-ERCC5R4GMW8 1640 aa11.91□□□□□ -0.5
LINC00461-216ENST00000515885 TMEM88BA6NKF7 163 aa11.91□□□□□ -0.5
LINC00461-216ENST00000515885 SLC10A3P09131 477 aa11.91□□□□□ -0.5
LINC00461-216ENST00000515885 MTMR2Q13614 643 aa11.91□□□□□ -0.5
LINC00461-216ENST00000515885 ZSWIM6Q9HCJ5 1215 aa11.91□□□□□ -0.5
LINC00461-216ENST00000515885 CFAP99D6REC4 459 aa11.9□□□□□ -0.5
LINC00461-216ENST00000515885 CDCA8Q53HL2 280 aa11.9□□□□□ -0.5
LINC00461-216ENST00000515885 HELBQ8NG08 1087 aaPredicted RBP11.9□□□□□ -0.5
LINC00461-216ENST00000515885 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
LINC00461-216ENST00000515885 PROX2Q3B8N5 592 aa11.89□□□□□ -0.51
LINC00461-216ENST00000515885 FBXO41Q8TF61 875 aa11.89□□□□□ -0.51
LINC00461-216ENST00000515885 TSC1Q92574 1164 aa11.89□□□□□ -0.51
LINC00461-216ENST00000515885 VRTNQ9H8Y1 702 aa11.89□□□□□ -0.51
LINC00461-216ENST00000515885 ATG7O95352 703 aa11.88□□□□□ -0.51
LINC00461-216ENST00000515885 PPRC1Q5VV67 1664 aaKnown RBP11.87□□□□□ -0.51
LINC00461-216ENST00000515885 RIMBP2O15034 1052 aa11.86□□□□□ -0.51
LINC00461-216ENST00000515885 MAFBQ9Y5Q3 323 aaPredicted RBP11.86□□□□□ -0.51
LINC00461-216ENST00000515885 SOX11P35716 441 aa11.85□□□□□ -0.51
LINC00461-216ENST00000515885 CCDC27Q2M243 656 aa11.85□□□□□ -0.51
LINC00461-216ENST00000515885 CUL7Q14999 1698 aa11.84□□□□□ -0.51
LINC00461-216ENST00000515885 PSDA5PKW4 1024 aaPredicted RBP11.84□□□□□ -0.51
LINC00461-216ENST00000515885 RSPH4AQ5TD94 716 aa11.84□□□□□ -0.51
LINC00461-216ENST00000515885 TBC1D9Q6ZT07 1266 aa11.84□□□□□ -0.51
LINC00461-216ENST00000515885 SND1Q7KZF4 910 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC00461-216ENST00000515885 PTPRGP23470 1445 aa11.84□□□□□ -0.51
LINC00461-216ENST00000515885 PLB1Q6P1J6 1458 aa11.83□□□□□ -0.52
LINC00461-216ENST00000515885 SWT1Q5T5J6 900 aaKnown RBP11.83□□□□□ -0.52
LINC00461-216ENST00000515885 ASXL2Q76L83 1435 aa11.83□□□□□ -0.52
LINC00461-216ENST00000515885 GLI2P10070 1586 aa11.83□□□□□ -0.52
LINC00461-216ENST00000515885 KIAA0586Q9BVV6 1533 aa11.82□□□□□ -0.52
LINC00461-216ENST00000515885 E9PSI1 815 aa11.82□□□□□ -0.52
LINC00461-216ENST00000515885 NR6A1Q15406 480 aa11.82□□□□□ -0.52
LINC00461-216ENST00000515885 C6orf229H3BNL8 230 aa11.81□□□□□ -0.52
LINC00461-216ENST00000515885 IGSF3O75054 1194 aa11.81□□□□□ -0.52
LINC00461-216ENST00000515885 SEMA3FQ13275 785 aa11.81□□□□□ -0.52
LINC00461-216ENST00000515885 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
LINC00461-216ENST00000515885 AMOTL2Q9Y2J4 779 aa11.81□□□□□ -0.52
LINC00461-216ENST00000515885 TEX14Q8IWB6 1497 aa11.81□□□□□ -0.52
LINC00461-216ENST00000515885 ABCC2Q92887 1545 aa11.81□□□□□ -0.52
LINC00461-216ENST00000515885 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
LINC00461-216ENST00000515885 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
LINC00461-216ENST00000515885 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
LINC00461-216ENST00000515885 CARMIL2Q6F5E8 1435 aa11.78□□□□□ -0.52
LINC00461-216ENST00000515885 COL17A1Q9UMD9 1497 aaPredicted RBP11.78□□□□□ -0.52
LINC00461-216ENST00000515885 PER1O15534 1290 aaPredicted RBP11.78□□□□□ -0.52
LINC00461-216ENST00000515885 FUT2Q10981 343 aa11.78□□□□□ -0.52
LINC00461-216ENST00000515885 ATP9BO43861 1147 aa11.77□□□□□ -0.53
LINC00461-216ENST00000515885 GNEQ9Y223 722 aaKnown RBP11.77□□□□□ -0.53
LINC00461-216ENST00000515885 MAP3K4Q9Y6R4 1608 aa11.77□□□□□ -0.53
LINC00461-216ENST00000515885 TNIKQ9UKE5 1360 aa11.77□□□□□ -0.53
LINC00461-216ENST00000515885 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
LINC00461-216ENST00000515885 KANK4Q5T7N3 995 aaPredicted RBP11.76□□□□□ -0.53
LINC00461-216ENST00000515885 KCNK17Q96T54 332 aa11.76□□□□□ -0.53
LINC00461-216ENST00000515885 ZBED2Q9BTP6 218 aa11.75□□□□□ -0.53
LINC00461-216ENST00000515885 LMTK3Q96Q04 1460 aa11.75□□□□□ -0.53
LINC00461-216ENST00000515885 EPRSP07814 1512 aaKnown RBP11.75□□□□□ -0.53
LINC00461-216ENST00000515885 EIF4G2P78344 907 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC00461-216ENST00000515885 GRIPAP1Q4V328 841 aa11.73□□□□□ -0.53
LINC00461-216ENST00000515885 ZMIZ1Q9ULJ6 1067 aa11.73□□□□□ -0.53
LINC00461-216ENST00000515885 UACAQ9BZF9 1416 aa11.72□□□□□ -0.53
LINC00461-216ENST00000515885 PIK3CDO00329 1044 aa11.72□□□□□ -0.53
LINC00461-216ENST00000515885 ELOAQ14241 798 aaKnown RBP11.72□□□□□ -0.53
LINC00461-216ENST00000515885 TMEM164Q5U3C3 297 aa11.71□□□□□ -0.53
LINC00461-216ENST00000515885 PNMA1Q8ND90 353 aa11.71□□□□□ -0.53
LINC00461-216ENST00000515885 STK32AQ8WU08 396 aa11.71□□□□□ -0.53
LINC00461-216ENST00000515885 SEPT9Q9UHD8 586 aaPredicted RBP11.71□□□□□ -0.53
LINC00461-216ENST00000515885 KIF21BO75037 1637 aa11.71□□□□□ -0.54
LINC00461-216ENST00000515885 ZCCHC11Q5TAX3 1644 aaKnown RBP11.71□□□□□ -0.54
LINC00461-216ENST00000515885 UHRF1BP1LA0JNW5 1464 aa11.7□□□□□ -0.54
LINC00461-216ENST00000515885 CFHP08603 1231 aa11.7□□□□□ -0.54
LINC00461-216ENST00000515885 ATP6V1AP38606 617 aa11.7□□□□□ -0.54
LINC00461-216ENST00000515885 NR1H3Q13133 447 aa11.7□□□□□ -0.54
LINC00461-216ENST00000515885 IGF1RP08069 1367 aa11.68□□□□□ -0.54
LINC00461-216ENST00000515885 IQGAP2Q13576 1575 aa11.68□□□□□ -0.54
LINC00461-216ENST00000515885 B4GALNT3Q6L9W6 998 aa11.68□□□□□ -0.54
LINC00461-216ENST00000515885 PHLDB3Q6NSJ2 640 aa11.68□□□□□ -0.54
LINC00461-216ENST00000515885 TXNDC2Q86VQ3 553 aa11.68□□□□□ -0.54
LINC00461-216ENST00000515885 KIF27Q86VH2 1401 aa11.68□□□□□ -0.54
LINC00461-216ENST00000515885 FBXO45P0C2W1 286 aa11.67□□□□□ -0.54
LINC00461-216ENST00000515885 RETREG3Q86VR2 466 aa11.67□□□□□ -0.54
LINC00461-216ENST00000515885 RABGEF1Q9UJ41 708 aa11.67□□□□□ -0.54
LINC00461-216ENST00000515885 KDM5BQ9UGL1 1544 aa11.66□□□□□ -0.54
LINC00461-216ENST00000515885 UNCXA6NJT0 531 aa11.66□□□□□ -0.54
LINC00461-216ENST00000515885 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
LINC00461-216ENST00000515885 KCNH8Q96L42 1107 aa11.66□□□□□ -0.54
LINC00461-216ENST00000515885 NOVA2Q9UNW9 492 aaKnown RBP11.66□□□□□ -0.54
LINC00461-216ENST00000515885 PSEN2P49810 448 aa11.65□□□□□ -0.54
LINC00461-216ENST00000515885 HDGFP51858 240 aaKnown RBP11.65□□□□□ -0.54
LINC00461-216ENST00000515885 DESI1Q6ICB0 168 aa11.65□□□□□ -0.54
LINC00461-216ENST00000515885 CFAP43Q8NDM7 1665 aa11.65□□□□□ -0.55
LINC00461-216ENST00000515885 CD109Q6YHK3 1445 aa11.64□□□□□ -0.55
LINC00461-216ENST00000515885 USP17L3A6NCW0 530 aa11.64□□□□□ -0.55
LINC00461-216ENST00000515885 USP17L4A6NCW7 530 aa11.64□□□□□ -0.55
LINC00461-216ENST00000515885 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
LINC00461-216ENST00000515885 LYPD8Q6UX82 237 aa11.64□□□□□ -0.55
LINC00461-216ENST00000515885 USP17L1Q7RTZ2 530 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms