RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
CDC42SE2-212ENST00000515533 SLC24A1O60721 1099 aa13.6□□□□□ -0.23
CDC42SE2-212ENST00000515533 ITGAEP38570 1179 aa13.6□□□□□ -0.23
CDC42SE2-212ENST00000515533 C14orf37Q86TY3 774 aa13.6□□□□□ -0.23
CDC42SE2-212ENST00000515533 SLAIN2Q9P270 581 aa13.6□□□□□ -0.23
CDC42SE2-212ENST00000515533 TRPM2O94759 1503 aa13.59□□□□□ -0.23
CDC42SE2-212ENST00000515533 NUP155O75694 1391 aa13.59□□□□□ -0.23
CDC42SE2-212ENST00000515533 RGS17Q9UGC6 210 aaPredicted RBP13.59□□□□□ -0.23
CDC42SE2-212ENST00000515533 PHF8Q9UPP1 1060 aa13.59□□□□□ -0.23
CDC42SE2-212ENST00000515533 TBX22Q9Y458 520 aa13.59□□□□□ -0.23
CDC42SE2-212ENST00000515533 KIF1BO60333 1816 aa13.59□□□□□ -0.23
CDC42SE2-212ENST00000515533 NCOA3Q9Y6Q9 1424 aa13.58□□□□□ -0.24
CDC42SE2-212ENST00000515533 COL16A1Q07092 1604 aaPredicted RBP13.58□□□□□ -0.24
CDC42SE2-212ENST00000515533 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
CDC42SE2-212ENST00000515533 NUTM2DQ5VT03 806 aaPredicted RBP13.58□□□□□ -0.24
CDC42SE2-212ENST00000515533 PIK3R4Q99570 1358 aa13.58□□□□□ -0.24
CDC42SE2-212ENST00000515533 ADAMTS13Q76LX8 1427 aa13.57□□□□□ -0.24
CDC42SE2-212ENST00000515533 GPR153Q6NV75 609 aa13.57□□□□□ -0.24
CDC42SE2-212ENST00000515533 JCADQ9P266 1359 aa13.57□□□□□ -0.24
CDC42SE2-212ENST00000515533 SETD1AO15047 1707 aaKnown RBP13.56□□□□□ -0.24
CDC42SE2-212ENST00000515533 NRXN3Q9Y4C0 1643 aa13.55□□□□□ -0.24
CDC42SE2-212ENST00000515533 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
CDC42SE2-212ENST00000515533 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
CDC42SE2-212ENST00000515533 XRN1Q8IZH2 1706 aaKnown RBP13.54□□□□□ -0.24
CDC42SE2-212ENST00000515533 ATF3P18847 181 aa13.54□□□□□ -0.24
CDC42SE2-212ENST00000515533 ZNF687Q8N1G0 1237 aa13.54□□□□□ -0.24
CDC42SE2-212ENST00000515533 RNF166Q96A37 237 aaPredicted RBP13.54□□□□□ -0.24
CDC42SE2-212ENST00000515533 AHDC1Q5TGY3 1603 aaPredicted RBP13.53□□□□□ -0.24
CDC42SE2-212ENST00000515533 C19orf44Q9H6X5 657 aa13.53□□□□□ -0.24
CDC42SE2-212ENST00000515533 SETBP1Q9Y6X0 1596 aa13.53□□□□□ -0.24
CDC42SE2-212ENST00000515533 POTEAQ6S8J7 498 aa13.52□□□□□ -0.25
CDC42SE2-212ENST00000515533 PPARGC1BQ86YN6 1023 aaKnown RBP13.52□□□□□ -0.25
CDC42SE2-212ENST00000515533 CLTCL1P53675 1640 aa13.51□□□□□ -0.25
CDC42SE2-212ENST00000515533 ZNF326Q5BKZ1 582 aaKnown RBP13.51□□□□□ -0.25
CDC42SE2-212ENST00000515533 AMOTL2Q9Y2J4 779 aa13.51□□□□□ -0.25
CDC42SE2-212ENST00000515533 DCCP43146 1447 aa13.49□□□□□ -0.25
CDC42SE2-212ENST00000515533 PTPRUQ92729 1446 aa13.49□□□□□ -0.25
CDC42SE2-212ENST00000515533 SPATA31A6Q5VVP1 1343 aa13.49□□□□□ -0.25
CDC42SE2-212ENST00000515533 NHSL1Q5SYE7 1610 aa13.49□□□□□ -0.25
CDC42SE2-212ENST00000515533 NALCNQ8IZF0 1738 aa13.48□□□□□ -0.25
CDC42SE2-212ENST00000515533 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
CDC42SE2-212ENST00000515533 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
CDC42SE2-212ENST00000515533 LRP6O75581 1613 aa13.47□□□□□ -0.25
CDC42SE2-212ENST00000515533 ASXL1Q8IXJ9 1541 aa13.47□□□□□ -0.25
CDC42SE2-212ENST00000515533 ARSIQ5FYB1 569 aa13.46□□□□□ -0.25
CDC42SE2-212ENST00000515533 NLRP6P59044 892 aa13.45□□□□□ -0.26
CDC42SE2-212ENST00000515533 BRINP3Q76B58 766 aa13.45□□□□□ -0.26
CDC42SE2-212ENST00000515533 RRBP1Q9P2E9 1410 aaKnown RBP13.45□□□□□ -0.26
CDC42SE2-212ENST00000515533 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE2-212ENST00000515533 FBXO22Q8NEZ5 403 aa13.44□□□□□ -0.26
CDC42SE2-212ENST00000515533 PPLO60437 1756 aa13.44□□□□□ -0.26
CDC42SE2-212ENST00000515533 MST1RQ04912 1400 aa13.43□□□□□ -0.26
CDC42SE2-212ENST00000515533 NAIPQ13075 1403 aa13.43□□□□□ -0.26
CDC42SE2-212ENST00000515533 ADGRL3Q9HAR2 1447 aa13.43□□□□□ -0.26
CDC42SE2-212ENST00000515533 METP08581 1390 aa13.43□□□□□ -0.26
CDC42SE2-212ENST00000515533 BCL11BQ9C0K0 894 aaPredicted RBP13.42□□□□□ -0.26
CDC42SE2-212ENST00000515533 SETD5Q9C0A6 1442 aa13.4□□□□□ -0.26
CDC42SE2-212ENST00000515533 NUTM2BA6NNL0 878 aaPredicted RBP13.4□□□□□ -0.26
CDC42SE2-212ENST00000515533 NUTM2EB1AL46 878 aaPredicted RBP13.4□□□□□ -0.26
CDC42SE2-212ENST00000515533 NUTM2AQ8IVF1 878 aaPredicted RBP13.4□□□□□ -0.26
CDC42SE2-212ENST00000515533 KHSRPQ92945 711 aaKnown RBP eCLIP13.4□□□□□ -0.26
CDC42SE2-212ENST00000515533 TRIM52Q96A61 297 aa13.4□□□□□ -0.26
CDC42SE2-212ENST00000515533 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
CDC42SE2-212ENST00000515533 PTGER2P43116 358 aa13.39□□□□□ -0.27
CDC42SE2-212ENST00000515533 LRRC59Q96AG4 307 aaKnown RBP13.38□□□□□ -0.27
CDC42SE2-212ENST00000515533 HFM1A2PYH4 1435 aa13.38□□□□□ -0.27
CDC42SE2-212ENST00000515533 PTCH1Q13635 1447 aa13.38□□□□□ -0.27
CDC42SE2-212ENST00000515533 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
CDC42SE2-212ENST00000515533 LAMC1P11047 1609 aa13.37□□□□□ -0.27
CDC42SE2-212ENST00000515533 RXRBP28702 533 aa13.36□□□□□ -0.27
CDC42SE2-212ENST00000515533 MFRPQ9BY79 579 aa13.36□□□□□ -0.27
CDC42SE2-212ENST00000515533 STK24Q9Y6E0 443 aa13.36□□□□□ -0.27
CDC42SE2-212ENST00000515533 AFF2P51816 1311 aa13.36□□□□□ -0.27
CDC42SE2-212ENST00000515533 IFT172Q9UG01 1749 aa13.36□□□□□ -0.27
CDC42SE2-212ENST00000515533 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
CDC42SE2-212ENST00000515533 RPGRIP1LQ68CZ1 1315 aa13.35□□□□□ -0.27
CDC42SE2-212ENST00000515533 C1orf167Q5SNV9 1468 aa13.35□□□□□ -0.27
CDC42SE2-212ENST00000515533 PNPLA6Q8IY17 1366 aa13.34□□□□□ -0.27
CDC42SE2-212ENST00000515533 DDX17Q92841 729 aaKnown RBP13.34□□□□□ -0.27
CDC42SE2-212ENST00000515533 CDK12Q9NYV4 1490 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE2-212ENST00000515533 PRAG1Q86YV5 1406 aa13.33□□□□□ -0.28
CDC42SE2-212ENST00000515533 KIF3CO14782 793 aa13.33□□□□□ -0.28
CDC42SE2-212ENST00000515533 C8orf37Q96NL8 207 aa13.33□□□□□ -0.28
CDC42SE2-212ENST00000515533 MARF1Q9Y4F3 1742 aaKnown RBP13.33□□□□□ -0.28
CDC42SE2-212ENST00000515533 ROBO2Q9HCK4 1378 aa13.32□□□□□ -0.28
CDC42SE2-212ENST00000515533 KNDC1Q76NI1 1749 aa13.31□□□□□ -0.28
CDC42SE2-212ENST00000515533 C2orf72A6NCS6 295 aa13.31□□□□□ -0.28
CDC42SE2-212ENST00000515533 LSM11P83369 360 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDC42SE2-212ENST00000515533 UPF1Q92900 1129 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDC42SE2-212ENST00000515533 CDC42BPGQ6DT37 1551 aa13.31□□□□□ -0.28
CDC42SE2-212ENST00000515533 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
CDC42SE2-212ENST00000515533 COL22A1Q8NFW1 1626 aaPredicted RBP13.3□□□□□ -0.28
CDC42SE2-212ENST00000515533 STK25O00506 426 aa13.29□□□□□ -0.28
CDC42SE2-212ENST00000515533 ADAMTS2O95450 1211 aa13.29□□□□□ -0.28
CDC42SE2-212ENST00000515533 NGLY1Q96IV0 654 aa13.29□□□□□ -0.28
CDC42SE2-212ENST00000515533 ORAI2Q96SN7 254 aa13.29□□□□□ -0.28
CDC42SE2-212ENST00000515533 RBM6P78332 1123 aaKnown RBP13.28□□□□□ -0.28
CDC42SE2-212ENST00000515533 QTRT2Q9H974 415 aaKnown RBP13.28□□□□□ -0.28
CDC42SE2-212ENST00000515533 SOS2Q07890 1332 aaPredicted RBP13.28□□□□□ -0.28
CDC42SE2-212ENST00000515533 RGPD8O14715 1765 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms