RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CRYBG1Q9Y4K1 1723 aa23.22■■□□□ 1.31
LMNA-223ENST00000515459 RGPD1P0DJD0 1748 aa23.21■■□□□ 1.31
LMNA-223ENST00000515459 WASLO00401 505 aaPredicted RBP23.2■■□□□ 1.3
LMNA-223ENST00000515459 RAB3GAP2Q9H2M9 1393 aa23.19■■□□□ 1.3
LMNA-223ENST00000515459 NGDNQ8NEJ9 315 aaKnown RBP23.19■■□□□ 1.3
LMNA-223ENST00000515459 SPATA31A5Q5VU36 1347 aa23.18■■□□□ 1.3
LMNA-223ENST00000515459 SPATA31A7Q8IWB4 1347 aa23.18■■□□□ 1.3
LMNA-223ENST00000515459 KDM2AQ9Y2K7 1162 aa23.18■■□□□ 1.3
LMNA-223ENST00000515459 ITSN1Q15811 1721 aa23.17■■□□□ 1.3
LMNA-223ENST00000515459 PSDA5PKW4 1024 aaPredicted RBP23.17■■□□□ 1.3
LMNA-223ENST00000515459 PAK3O75914 559 aaPredicted RBP23.17■■□□□ 1.3
LMNA-223ENST00000515459 DCAF11Q8TEB1 546 aa23.17■■□□□ 1.3
LMNA-223ENST00000515459 THSD7AQ9UPZ6 1657 aa23.16■■□□□ 1.3
LMNA-223ENST00000515459 PRDM11Q9NQV5 511 aa23.16■■□□□ 1.3
LMNA-223ENST00000515459 STAC3Q96MF2 364 aa23.15■■□□□ 1.3
LMNA-223ENST00000515459 HRCP23327 699 aa23.14■■□□□ 1.29
LMNA-223ENST00000515459 EN1Q05925 392 aaPredicted RBP23.14■■□□□ 1.29
LMNA-223ENST00000515459 FAM182BQ5T319 152 aa23.14■■□□□ 1.29
LMNA-223ENST00000515459 ARHGEF28Q8N1W1 1705 aaKnown RBP23.13■■□□□ 1.29
LMNA-223ENST00000515459 TNS1Q9HBL0 1735 aaKnown RBP23.12■■□□□ 1.29
LMNA-223ENST00000515459 ATP7BP35670 1465 aa23.11■■□□□ 1.29
LMNA-223ENST00000515459 PHRF1Q9P1Y6 1649 aaKnown RBP23.11■■□□□ 1.29
LMNA-223ENST00000515459 DISP2A7MBM2 1401 aa23.1■■□□□ 1.29
LMNA-223ENST00000515459 NUDT16Q96DE0 195 aaKnown RBP23.1■■□□□ 1.29
LMNA-223ENST00000515459 KIAA0232Q92628 1395 aa23.09■■□□□ 1.29
LMNA-223ENST00000515459 SPATA31A1Q5TZJ5 1347 aa23.08■■□□□ 1.29
LMNA-223ENST00000515459 CHRNA2Q15822 529 aa23.06■■□□□ 1.28
LMNA-223ENST00000515459 STRN4Q9NRL3 753 aa23.06■■□□□ 1.28
LMNA-223ENST00000515459 R3HDM1Q15032 1099 aaKnown RBP23.05■■□□□ 1.28
LMNA-223ENST00000515459 FAM196AQ6ZSG2 479 aa23.05■■□□□ 1.28
LMNA-223ENST00000515459 TOPAZ1Q8N9V7 1692 aa23.04■■□□□ 1.28
LMNA-223ENST00000515459 ZC3H6P61129 1189 aaKnown RBP23.04■■□□□ 1.28
LMNA-223ENST00000515459 EZH2Q15910 746 aaKnown RBP23.04■■□□□ 1.28
LMNA-223ENST00000515459 CDK19Q9BWU1 502 aa23.03■■□□□ 1.28
LMNA-223ENST00000515459 POLR3AO14802 1390 aaPredicted RBP23.02■■□□□ 1.28
LMNA-223ENST00000515459 TRIM37O94972 964 aa23.02■■□□□ 1.28
LMNA-223ENST00000515459 NUTM2GQ5VZR2 741 aa23.02■■□□□ 1.28
LMNA-223ENST00000515459 CAMKK2Q96RR4 588 aa23.01■■□□□ 1.27
LMNA-223ENST00000515459 ACEP12821 1306 aa23.01■■□□□ 1.27
LMNA-223ENST00000515459 EVA1CP58658 441 aa23■■□□□ 1.27
LMNA-223ENST00000515459 NBPF8Q3BBV2 869 aa23■■□□□ 1.27
LMNA-223ENST00000515459 USP35Q9P2H5 1018 aa23■■□□□ 1.27
LMNA-223ENST00000515459 CCDC61Q9Y6R9 512 aa23■■□□□ 1.27
LMNA-223ENST00000515459 NRKQ7Z2Y5 1582 aa22.99■■□□□ 1.27
LMNA-223ENST00000515459 BARGINQ6ZT62 677 aa22.99■■□□□ 1.27
LMNA-223ENST00000515459 SSH2Q76I76 1423 aa22.99■■□□□ 1.27
LMNA-223ENST00000515459 APBA3O96018 575 aa22.98■■□□□ 1.27
LMNA-223ENST00000515459 KIAA1210Q9ULL0 1709 aa22.98■■□□□ 1.27
LMNA-223ENST00000515459 PARD3Q8TEW0 1356 aa22.98■■□□□ 1.27
LMNA-223ENST00000515459 PLEKHG3A1L390 1219 aa22.97■■□□□ 1.27
LMNA-223ENST00000515459 PDE3BQ13370 1112 aa22.97■■□□□ 1.27
LMNA-223ENST00000515459 ABTB2Q8N961 1025 aa22.97■■□□□ 1.27
LMNA-223ENST00000515459 CAMTA1Q9Y6Y1 1673 aa22.96■■□□□ 1.27
LMNA-223ENST00000515459 LMO7Q8WWI1 1683 aa22.95■■□□□ 1.26
LMNA-223ENST00000515459 RREB1Q92766 1687 aa22.95■■□□□ 1.26
LMNA-223ENST00000515459 CPDO75976 1380 aa22.94■■□□□ 1.26
LMNA-223ENST00000515459 LARP1Q6PKG0 1096 aaKnown RBP22.93■■□□□ 1.26
LMNA-223ENST00000515459 TCP11L2Q8N4U5 519 aa22.93■■□□□ 1.26
LMNA-223ENST00000515459 USP19O94966 1318 aa22.92■■□□□ 1.26
LMNA-223ENST00000515459 NUP188Q5SRE5 1749 aa22.91■■□□□ 1.26
LMNA-223ENST00000515459 NLRP13Q86W25 1043 aa22.91■■□□□ 1.26
LMNA-223ENST00000515459 THRAP3Q9Y2W1 955 aaKnown RBP22.9■■□□□ 1.26
LMNA-223ENST00000515459 PARP4Q9UKK3 1724 aaKnown RBP22.89■■□□□ 1.26
LMNA-223ENST00000515459 PPIP5K1Q6PFW1 1433 aa22.89■■□□□ 1.25
LMNA-223ENST00000515459 GCP02774 474 aa22.88■■□□□ 1.25
LMNA-223ENST00000515459 SRPK2P78362 688 aaKnown RBP22.88■■□□□ 1.25
LMNA-223ENST00000515459 NBPF14Q5TI25 921 aa22.88■■□□□ 1.25
LMNA-223ENST00000515459 COL5A2P05997 1499 aaPredicted RBP22.87■■□□□ 1.25
LMNA-223ENST00000515459 NBPF1Q3BBV0 1214 aa22.87■■□□□ 1.25
LMNA-223ENST00000515459 BRD4O60885 1362 aaPredicted RBP22.86■■□□□ 1.25
LMNA-223ENST00000515459 C11orf95C9JLR9 678 aaPredicted RBP22.85■■□□□ 1.25
LMNA-223ENST00000515459 CENPJQ9HC77 1338 aaPredicted RBP22.84■■□□□ 1.25
LMNA-223ENST00000515459 CRB1P82279 1406 aa22.83■■□□□ 1.25
LMNA-223ENST00000515459 CABP2Q9NPB3 220 aa22.83■■□□□ 1.25
LMNA-223ENST00000515459 QRICH2Q9H0J4 1663 aa22.82■■□□□ 1.24
LMNA-223ENST00000515459 PEAK1Q9H792 1746 aa22.8■■□□□ 1.24
LMNA-223ENST00000515459 ZBTB7CA1YPR0 619 aa22.8■■□□□ 1.24
LMNA-223ENST00000515459 OVOS2A0A0G2JMS6 1433 aa22.8■■□□□ 1.24
LMNA-223ENST00000515459 OVOS2A0A0J9YW53 1432 aa22.8■■□□□ 1.24
LMNA-223ENST00000515459 USP6P35125 1406 aa22.8■■□□□ 1.24
LMNA-223ENST00000515459 OVOS2Q6IE36 1432 aa22.8■■□□□ 1.24
LMNA-223ENST00000515459 SLIT3O75094 1523 aa22.79■■□□□ 1.24
LMNA-223ENST00000515459 NLRP6P59044 892 aa22.79■■□□□ 1.24
LMNA-223ENST00000515459 SBF2Q86WG5 1849 aa22.79■■□□□ 1.24
LMNA-223ENST00000515459 LRRC37A3O60309 1634 aa22.79■■□□□ 1.24
LMNA-223ENST00000515459 RGPD3A6NKT7 1758 aaPredicted RBP22.78■■□□□ 1.24
LMNA-223ENST00000515459 RGPD4Q7Z3J3 1758 aa22.78■■□□□ 1.24
LMNA-223ENST00000515459 AATKQ6ZMQ8 1374 aa22.78■■□□□ 1.24
LMNA-223ENST00000515459 CABP1Q9NZU7 370 aa22.78■■□□□ 1.24
LMNA-223ENST00000515459 SPON1Q9HCB6 807 aa22.77■■□□□ 1.24
LMNA-223ENST00000515459 DDB1Q16531 1140 aa22.76■■□□□ 1.23
LMNA-223ENST00000515459 PPP1R1BQ9UD71 204 aaPredicted RBP22.76■■□□□ 1.23
LMNA-223ENST00000515459 KCNQ2O43526 872 aa22.75■■□□□ 1.23
LMNA-223ENST00000515459 TOM1L2Q6ZVM7 507 aa22.75■■□□□ 1.23
LMNA-223ENST00000515459 COL18A1P39060 1754 aa22.75■■□□□ 1.23
LMNA-223ENST00000515459 WNK3Q9BYP7 1800 aa22.75■■□□□ 1.23
LMNA-223ENST00000515459 PIK3C2AO00443 1686 aa22.74■■□□□ 1.23
LMNA-223ENST00000515459 PLSCR1O15162 318 aa22.74■■□□□ 1.23
LMNA-223ENST00000515459 YY1P25490 414 aa22.72■■□□□ 1.23
LMNA-223ENST00000515459 AKAP12Q02952 1782 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms