RNA–Protein interactions for RNA: ENST00000515068.1

CSF1R-207, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 5

Gene CSF1R, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-207ENST00000515068 BLMP54132 1417 aaPredicted RBP16.83■□□□□ 0.28
CSF1R-207ENST00000515068 HNRNPUQ00839 825 aaKnown RBP eCLIP16.83■□□□□ 0.28
CSF1R-207ENST00000515068 PROSER2Q86WR7 435 aaPredicted RBP16.83■□□□□ 0.28
CSF1R-207ENST00000515068 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
CSF1R-207ENST00000515068 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
CSF1R-207ENST00000515068 TTC21BQ7Z4L5 1316 aa16.82■□□□□ 0.28
CSF1R-207ENST00000515068 FBLN1P23142 703 aa16.82■□□□□ 0.28
CSF1R-207ENST00000515068 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
CSF1R-207ENST00000515068 TMEM94Q12767 1356 aa16.81■□□□□ 0.28
CSF1R-207ENST00000515068 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
CSF1R-207ENST00000515068 LTBP4Q8N2S1 1624 aa16.81■□□□□ 0.28
CSF1R-207ENST00000515068 OVOS2A0A0J9YW53 1432 aa16.8■□□□□ 0.28
CSF1R-207ENST00000515068 OVOS2Q6IE36 1432 aa16.8■□□□□ 0.28
CSF1R-207ENST00000515068 INSRP06213 1382 aa16.8■□□□□ 0.28
CSF1R-207ENST00000515068 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
CSF1R-207ENST00000515068 LRRC7Q96NW7 1537 aa16.8■□□□□ 0.28
CSF1R-207ENST00000515068 MTHFSP49914 203 aa16.79■□□□□ 0.28
CSF1R-207ENST00000515068 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
CSF1R-207ENST00000515068 NCOA3Q9Y6Q9 1424 aa16.79■□□□□ 0.28
CSF1R-207ENST00000515068 ZNF335Q9H4Z2 1342 aaPredicted RBP16.78■□□□□ 0.28
CSF1R-207ENST00000515068 MST1RQ04912 1400 aa16.78■□□□□ 0.28
CSF1R-207ENST00000515068 C1orf167Q5SNV9 1468 aa16.77■□□□□ 0.28
CSF1R-207ENST00000515068 SMG6Q86US8 1419 aaKnown RBP16.77■□□□□ 0.27
CSF1R-207ENST00000515068 PEAK1Q9H792 1746 aa16.76■□□□□ 0.27
CSF1R-207ENST00000515068 TRPM3Q9HCF6 1732 aaPredicted RBP16.76■□□□□ 0.27
CSF1R-207ENST00000515068 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
CSF1R-207ENST00000515068 ORAI2Q96SN7 254 aa16.76■□□□□ 0.27
CSF1R-207ENST00000515068 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
CSF1R-207ENST00000515068 PNPLA6Q8IY17 1366 aa16.76■□□□□ 0.27
CSF1R-207ENST00000515068 ZBED9Q6R2W3 1325 aa16.75■□□□□ 0.27
CSF1R-207ENST00000515068 USP31Q70CQ4 1352 aa16.75■□□□□ 0.27
CSF1R-207ENST00000515068 DCCP43146 1447 aa16.74■□□□□ 0.27
CSF1R-207ENST00000515068 C19orf44Q9H6X5 657 aa16.74■□□□□ 0.27
CSF1R-207ENST00000515068 POLKQ9UBT6 870 aa16.74■□□□□ 0.27
CSF1R-207ENST00000515068 AATKQ6ZMQ8 1374 aa16.74■□□□□ 0.27
CSF1R-207ENST00000515068 KIF1AQ12756 1690 aa16.73■□□□□ 0.27
CSF1R-207ENST00000515068 NGDNQ8NEJ9 315 aaKnown RBP16.73■□□□□ 0.27
CSF1R-207ENST00000515068 TTC21AQ8NDW8 1320 aa16.72■□□□□ 0.27
CSF1R-207ENST00000515068 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
CSF1R-207ENST00000515068 EMILIN1Q9Y6C2 1016 aa16.71■□□□□ 0.27
CSF1R-207ENST00000515068 ESCO1Q5FWF5 840 aa16.7■□□□□ 0.26
CSF1R-207ENST00000515068 CDK12Q9NYV4 1490 aaPredicted RBP16.69■□□□□ 0.26
CSF1R-207ENST00000515068 COG3Q96JB2 828 aa16.69■□□□□ 0.26
CSF1R-207ENST00000515068 ALS2Q96Q42 1657 aa16.69■□□□□ 0.26
CSF1R-207ENST00000515068 IQSEC2Q5JU85 1478 aa16.68■□□□□ 0.26
CSF1R-207ENST00000515068 RRS1Q15050 365 aaKnown RBP16.67■□□□□ 0.26
CSF1R-207ENST00000515068 WDR43Q15061 677 aaKnown RBP eCLIP16.67■□□□□ 0.26
CSF1R-207ENST00000515068 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
CSF1R-207ENST00000515068 NFAT5O94916 1531 aa16.65■□□□□ 0.26
CSF1R-207ENST00000515068 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
CSF1R-207ENST00000515068 FOXO3O43524 673 aa16.65■□□□□ 0.26
CSF1R-207ENST00000515068 ILDR2Q71H61 639 aa16.65■□□□□ 0.26
CSF1R-207ENST00000515068 ZNF521Q96K83 1311 aa16.65■□□□□ 0.26
CSF1R-207ENST00000515068 MSH6P52701 1360 aa16.64■□□□□ 0.26
CSF1R-207ENST00000515068 XPCQ01831 940 aaPredicted RBP16.64■□□□□ 0.25
CSF1R-207ENST00000515068 NUTM2GQ5VZR2 741 aa16.64■□□□□ 0.25
CSF1R-207ENST00000515068 DDX17Q92841 729 aaKnown RBP16.64■□□□□ 0.25
CSF1R-207ENST00000515068 PXDNQ92626 1479 aa16.63■□□□□ 0.25
CSF1R-207ENST00000515068 UBAP1LF5GYI3 381 aa16.63■□□□□ 0.25
CSF1R-207ENST00000515068 ATF3P18847 181 aa16.63■□□□□ 0.25
CSF1R-207ENST00000515068 IL13P35225 146 aa16.63■□□□□ 0.25
CSF1R-207ENST00000515068 CFAP53Q96M91 514 aa16.63■□□□□ 0.25
CSF1R-207ENST00000515068 SLIT3O75094 1523 aa16.63■□□□□ 0.25
CSF1R-207ENST00000515068 CRYBG1Q9Y4K1 1723 aa16.62■□□□□ 0.25
CSF1R-207ENST00000515068 LTN1O94822 1766 aa16.62■□□□□ 0.25
CSF1R-207ENST00000515068 SALL2Q9Y467 1007 aaPredicted RBP16.62■□□□□ 0.25
CSF1R-207ENST00000515068 MED1Q15648 1581 aaPredicted RBP16.61■□□□□ 0.25
CSF1R-207ENST00000515068 APAF1O14727 1248 aa16.61■□□□□ 0.25
CSF1R-207ENST00000515068 NLRP6P59044 892 aa16.61■□□□□ 0.25
CSF1R-207ENST00000515068 CADPS2Q86UW7 1296 aa16.61■□□□□ 0.25
CSF1R-207ENST00000515068 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
CSF1R-207ENST00000515068 MAP3K19Q56UN5 1328 aa16.61■□□□□ 0.25
CSF1R-207ENST00000515068 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
CSF1R-207ENST00000515068 PSME1Q06323 249 aa16.6■□□□□ 0.25
CSF1R-207ENST00000515068 KRT28Q7Z3Y7 464 aa16.6■□□□□ 0.25
CSF1R-207ENST00000515068 ABTB2Q8N961 1025 aa16.6■□□□□ 0.25
CSF1R-207ENST00000515068 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
CSF1R-207ENST00000515068 PAK3O75914 559 aaPredicted RBP16.59■□□□□ 0.25
CSF1R-207ENST00000515068 CDCA7LQ96GN5 454 aa16.59■□□□□ 0.25
CSF1R-207ENST00000515068 PHRF1Q9P1Y6 1649 aaKnown RBP16.59■□□□□ 0.25
CSF1R-207ENST00000515068 SOX12O15370 315 aa16.58■□□□□ 0.24
CSF1R-207ENST00000515068 BRINP3Q76B58 766 aa16.58■□□□□ 0.24
CSF1R-207ENST00000515068 RUNDC1Q96C34 613 aa16.58■□□□□ 0.24
CSF1R-207ENST00000515068 GTF3C3Q9Y5Q9 886 aa16.58■□□□□ 0.24
CSF1R-207ENST00000515068 NHSL1Q5SYE7 1610 aa16.57■□□□□ 0.24
CSF1R-207ENST00000515068 USP19O94966 1318 aa16.57■□□□□ 0.24
CSF1R-207ENST00000515068 U2AF1L5P0DN76 240 aaPredicted RBP16.57■□□□□ 0.24
CSF1R-207ENST00000515068 U2AF1Q01081 240 aaKnown RBP eCLIP16.57■□□□□ 0.24
CSF1R-207ENST00000515068 EIF4A2Q14240 407 aaKnown RBP16.57■□□□□ 0.24
CSF1R-207ENST00000515068 HSP90AB2PQ58FF8 381 aa16.57■□□□□ 0.24
CSF1R-207ENST00000515068 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
CSF1R-207ENST00000515068 SBNO1A3KN83 1393 aa16.56■□□□□ 0.24
CSF1R-207ENST00000515068 RSPH6AQ9H0K4 717 aa16.56■□□□□ 0.24
CSF1R-207ENST00000515068 U2SURPO15042 1029 aaKnown RBP16.55■□□□□ 0.24
CSF1R-207ENST00000515068 TCP11L2Q8N4U5 519 aa16.55■□□□□ 0.24
CSF1R-207ENST00000515068 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
CSF1R-207ENST00000515068 SLAIN2Q9P270 581 aa16.54■□□□□ 0.24
CSF1R-207ENST00000515068 NUDCQ9Y266 331 aa16.54■□□□□ 0.24
CSF1R-207ENST00000515068 RRP7AQ9Y3A4 280 aaKnown RBP16.54■□□□□ 0.24
CSF1R-207ENST00000515068 RGPD2P0DJD1 1756 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms