RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 RGL3Q3MIN7 710 aa12.72□□□□□ -0.37
TRIM6-211ENST00000515022 POTEHQ6S545 545 aa12.72□□□□□ -0.37
TRIM6-211ENST00000515022 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
TRIM6-211ENST00000515022 NRAPQ86VF7 1730 aa12.71□□□□□ -0.37
TRIM6-211ENST00000515022 TNS1Q9HBL0 1735 aaKnown RBP12.71□□□□□ -0.38
TRIM6-211ENST00000515022 PSME1Q06323 249 aa12.7□□□□□ -0.38
TRIM6-211ENST00000515022 SAFB2Q14151 953 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRIM6-211ENST00000515022 PMFBP1Q8TBY8 1022 aa12.7□□□□□ -0.38
TRIM6-211ENST00000515022 IFT172Q9UG01 1749 aa12.7□□□□□ -0.38
TRIM6-211ENST00000515022 TRIM37O94972 964 aa12.69□□□□□ -0.38
TRIM6-211ENST00000515022 TECPR2O15040 1411 aa12.69□□□□□ -0.38
TRIM6-211ENST00000515022 RRBP1Q9P2E9 1410 aaKnown RBP12.68□□□□□ -0.38
TRIM6-211ENST00000515022 ABCC11Q96J66 1382 aa12.68□□□□□ -0.38
TRIM6-211ENST00000515022 CAMKK2Q96RR4 588 aa12.67□□□□□ -0.38
TRIM6-211ENST00000515022 KNDC1Q76NI1 1749 aa12.67□□□□□ -0.38
TRIM6-211ENST00000515022 SBNO1A3KN83 1393 aa12.67□□□□□ -0.38
TRIM6-211ENST00000515022 SPATA31A5Q5VU36 1347 aa12.66□□□□□ -0.38
TRIM6-211ENST00000515022 SPATA31A7Q8IWB4 1347 aa12.66□□□□□ -0.38
TRIM6-211ENST00000515022 YTHDC2Q9H6S0 1430 aaKnown RBP12.66□□□□□ -0.38
TRIM6-211ENST00000515022 ARHGEF10O15013 1369 aa12.66□□□□□ -0.38
TRIM6-211ENST00000515022 NRXN1Q9ULB1 1477 aa12.65□□□□□ -0.38
TRIM6-211ENST00000515022 APBA3O96018 575 aa12.65□□□□□ -0.38
TRIM6-211ENST00000515022 DISP2A7MBM2 1401 aa12.64□□□□□ -0.39
TRIM6-211ENST00000515022 COL14A1Q05707 1796 aaKnown RBP12.64□□□□□ -0.39
TRIM6-211ENST00000515022 THSD7AQ9UPZ6 1657 aa12.64□□□□□ -0.39
TRIM6-211ENST00000515022 TRPM3Q9HCF6 1732 aaPredicted RBP12.62□□□□□ -0.39
TRIM6-211ENST00000515022 CAMTA1Q9Y6Y1 1673 aa12.62□□□□□ -0.39
TRIM6-211ENST00000515022 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
TRIM6-211ENST00000515022 PRAM1Q96QH2 718 aa12.62□□□□□ -0.39
TRIM6-211ENST00000515022 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
TRIM6-211ENST00000515022 PPP1R1BQ9UD71 204 aaPredicted RBP12.62□□□□□ -0.39
TRIM6-211ENST00000515022 HIRIP3Q9BW71 556 aaPredicted RBP12.61□□□□□ -0.39
TRIM6-211ENST00000515022 USP35Q9P2H5 1018 aa12.61□□□□□ -0.39
TRIM6-211ENST00000515022 NUP188Q5SRE5 1749 aa12.61□□□□□ -0.39
TRIM6-211ENST00000515022 SPATA31E1Q6ZUB1 1445 aa12.61□□□□□ -0.39
TRIM6-211ENST00000515022 PAK3O75914 559 aaPredicted RBP12.6□□□□□ -0.39
TRIM6-211ENST00000515022 CFAP70Q5T0N1 1121 aa12.6□□□□□ -0.39
TRIM6-211ENST00000515022 FAM196AQ6ZSG2 479 aa12.6□□□□□ -0.39
TRIM6-211ENST00000515022 PRDM11Q9NQV5 511 aa12.6□□□□□ -0.39
TRIM6-211ENST00000515022 PIK3C2GO75747 1445 aa12.6□□□□□ -0.39
TRIM6-211ENST00000515022 RREB1Q92766 1687 aa12.6□□□□□ -0.39
TRIM6-211ENST00000515022 ALS2Q96Q42 1657 aa12.6□□□□□ -0.39
TRIM6-211ENST00000515022 ADGRB2O60241 1585 aa12.6□□□□□ -0.39
TRIM6-211ENST00000515022 ANKRD30BQ9BXX2 1392 aa12.59□□□□□ -0.39
TRIM6-211ENST00000515022 UTRNP46939 3433 aa12.59□□□□□ -0.39
TRIM6-211ENST00000515022 SPATA31A1Q5TZJ5 1347 aa12.59□□□□□ -0.39
TRIM6-211ENST00000515022 POGKQ9P215 609 aa12.58□□□□□ -0.4
TRIM6-211ENST00000515022 PRR36Q9H6K5 1346 aa12.58□□□□□ -0.4
TRIM6-211ENST00000515022 KIAA0232Q92628 1395 aa12.57□□□□□ -0.4
TRIM6-211ENST00000515022 CRYBG1Q9Y4K1 1723 aa12.57□□□□□ -0.4
TRIM6-211ENST00000515022 KCNQ2O43526 872 aa12.57□□□□□ -0.4
TRIM6-211ENST00000515022 NBPF8Q3BBV2 869 aa12.57□□□□□ -0.4
TRIM6-211ENST00000515022 NBPF14Q5TI25 921 aa12.57□□□□□ -0.4
TRIM6-211ENST00000515022 NUTM2GQ5VZR2 741 aa12.57□□□□□ -0.4
TRIM6-211ENST00000515022 SIRT1Q96EB6 747 aa12.57□□□□□ -0.4
TRIM6-211ENST00000515022 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
TRIM6-211ENST00000515022 C14orf93Q9H972 538 aaKnown RBP12.57□□□□□ -0.4
TRIM6-211ENST00000515022 SPON1Q9HCB6 807 aa12.57□□□□□ -0.4
TRIM6-211ENST00000515022 MINK1Q8N4C8 1332 aaPredicted RBP12.57□□□□□ -0.4
TRIM6-211ENST00000515022 ACIN1Q9UKV3 1341 aaKnown RBP12.57□□□□□ -0.4
TRIM6-211ENST00000515022 GPRASP1Q5JY77 1395 aa12.56□□□□□ -0.4
TRIM6-211ENST00000515022 ZC3H6P61129 1189 aaKnown RBP12.56□□□□□ -0.4
TRIM6-211ENST00000515022 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
TRIM6-211ENST00000515022 PDE3BQ13370 1112 aa12.55□□□□□ -0.4
TRIM6-211ENST00000515022 PARD3Q8TEW0 1356 aa12.55□□□□□ -0.4
TRIM6-211ENST00000515022 ANKARQ7Z5J8 1434 aa12.54□□□□□ -0.4
TRIM6-211ENST00000515022 NGDNQ8NEJ9 315 aaKnown RBP12.54□□□□□ -0.4
TRIM6-211ENST00000515022 PDGFDQ9GZP0 370 aaPredicted RBP12.54□□□□□ -0.4
TRIM6-211ENST00000515022 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
TRIM6-211ENST00000515022 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
TRIM6-211ENST00000515022 EVA1CP58658 441 aa12.53□□□□□ -0.4
TRIM6-211ENST00000515022 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
TRIM6-211ENST00000515022 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
TRIM6-211ENST00000515022 TRAK1Q9UPV9 953 aa12.53□□□□□ -0.4
TRIM6-211ENST00000515022 NINLQ9Y2I6 1382 aa12.53□□□□□ -0.4
TRIM6-211ENST00000515022 SENP3-EIF4A1A0A087X0R7 540 aa12.52□□□□□ -0.41
TRIM6-211ENST00000515022 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.41
TRIM6-211ENST00000515022 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.41
TRIM6-211ENST00000515022 ZBTB7AO95365 584 aa12.51□□□□□ -0.41
TRIM6-211ENST00000515022 MPHOSPH9Q99550 1183 aa12.51□□□□□ -0.41
TRIM6-211ENST00000515022 NRKQ7Z2Y5 1582 aa12.51□□□□□ -0.41
TRIM6-211ENST00000515022 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
TRIM6-211ENST00000515022 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
TRIM6-211ENST00000515022 FKBP8Q14318 412 aa12.5□□□□□ -0.41
TRIM6-211ENST00000515022 PTF1AQ7RTS3 328 aa12.5□□□□□ -0.41
TRIM6-211ENST00000515022 SSH2Q76I76 1423 aa12.5□□□□□ -0.41
TRIM6-211ENST00000515022 MYOM1P52179 1685 aa12.48□□□□□ -0.41
TRIM6-211ENST00000515022 TULP4Q9NRJ4 1543 aa12.48□□□□□ -0.41
TRIM6-211ENST00000515022 WASLO00401 505 aaPredicted RBP12.48□□□□□ -0.41
TRIM6-211ENST00000515022 BARGINQ6ZT62 677 aa12.48□□□□□ -0.41
TRIM6-211ENST00000515022 TCP11L2Q8N4U5 519 aa12.48□□□□□ -0.41
TRIM6-211ENST00000515022 DLC1Q96QB1 1528 aa12.47□□□□□ -0.41
TRIM6-211ENST00000515022 ZBTB7CA1YPR0 619 aa12.47□□□□□ -0.41
TRIM6-211ENST00000515022 CASZ1Q86V15 1759 aa12.47□□□□□ -0.41
TRIM6-211ENST00000515022 SBF2Q86WG5 1849 aa12.46□□□□□ -0.41
TRIM6-211ENST00000515022 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.41
TRIM6-211ENST00000515022 CHD4Q14839 1912 aa12.45□□□□□ -0.42
TRIM6-211ENST00000515022 ADGRB1O14514 1584 aa12.45□□□□□ -0.42
TRIM6-211ENST00000515022 PTGER2P43116 358 aa12.45□□□□□ -0.42
TRIM6-211ENST00000515022 NUDT16Q96DE0 195 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms