RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 HRO43593 1189 aa8.99□□□□□ -0.97
RFC1-216ENST00000514572 FBXO45P0C2W1 286 aa8.99□□□□□ -0.97
RFC1-216ENST00000514572 EIF4G2P78344 907 aaKnown RBP eCLIP8.99□□□□□ -0.97
RFC1-216ENST00000514572 BRICD5Q6PL45 260 aa8.99□□□□□ -0.97
RFC1-216ENST00000514572 THAP11Q96EK4 314 aa8.99□□□□□ -0.97
RFC1-216ENST00000514572 NFATC2IPQ8NCF5 419 aa8.98□□□□□ -0.97
RFC1-216ENST00000514572 PNMA1Q8ND90 353 aa8.98□□□□□ -0.97
RFC1-216ENST00000514572 LRCH3Q96II8 777 aa8.98□□□□□ -0.97
RFC1-216ENST00000514572 USB1Q9BQ65 265 aaKnown RBP8.98□□□□□ -0.97
RFC1-216ENST00000514572 PRR14Q9BWN1 585 aa8.98□□□□□ -0.97
RFC1-216ENST00000514572 ZC3H4Q9UPT8 1303 aaKnown RBP8.98□□□□□ -0.97
RFC1-216ENST00000514572 ELOAQ14241 798 aaKnown RBP8.97□□□□□ -0.97
RFC1-216ENST00000514572 KANK4Q5T7N3 995 aaPredicted RBP8.97□□□□□ -0.97
RFC1-216ENST00000514572 FKBPLQ9UIM3 349 aa8.97□□□□□ -0.97
RFC1-216ENST00000514572 ZBBXA8MT70 800 aa8.96□□□□□ -0.98
RFC1-216ENST00000514572 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.96□□□□□ -0.98
RFC1-216ENST00000514572 MTMR7Q9Y216 660 aa8.96□□□□□ -0.98
RFC1-216ENST00000514572 PIK3CDO00329 1044 aa8.95□□□□□ -0.98
RFC1-216ENST00000514572 PTPRNQ16849 979 aa8.95□□□□□ -0.98
RFC1-216ENST00000514572 MRPL50Q8N5N7 158 aaKnown RBP8.95□□□□□ -0.98
RFC1-216ENST00000514572 APLP1P51693 650 aa8.94□□□□□ -0.98
RFC1-216ENST00000514572 VRTNQ9H8Y1 702 aa8.94□□□□□ -0.98
RFC1-216ENST00000514572 ZMIZ1Q9ULJ6 1067 aa8.94□□□□□ -0.98
RFC1-216ENST00000514572 JUNDP17535 347 aa8.93□□□□□ -0.98
RFC1-216ENST00000514572 PLEKHM2Q8IWE5 1019 aa8.93□□□□□ -0.98
RFC1-216ENST00000514572 MAP10Q9P2G4 905 aa8.93□□□□□ -0.98
RFC1-216ENST00000514572 CDCA8Q53HL2 280 aa8.92□□□□□ -0.98
RFC1-216ENST00000514572 SCUBE3Q8IX30 993 aa8.92□□□□□ -0.98
RFC1-216ENST00000514572 STAC3Q96MF2 364 aa8.92□□□□□ -0.98
RFC1-216ENST00000514572 GNEQ9Y223 722 aaKnown RBP8.92□□□□□ -0.98
RFC1-216ENST00000514572 USP17L3A6NCW0 530 aa8.91□□□□□ -0.98
RFC1-216ENST00000514572 USP17L4A6NCW7 530 aa8.91□□□□□ -0.98
RFC1-216ENST00000514572 SOWAHBA6NEL2 793 aa8.91□□□□□ -0.98
RFC1-216ENST00000514572 USP17L2Q6R6M4 530 aa8.91□□□□□ -0.98
RFC1-216ENST00000514572 USP17L1Q7RTZ2 530 aa8.91□□□□□ -0.98
RFC1-216ENST00000514572 FAM174AQ8TBP5 190 aa8.91□□□□□ -0.98
RFC1-216ENST00000514572 OCSTAMPQ9BR26 566 aa8.91□□□□□ -0.98
RFC1-216ENST00000514572 IVNS1ABPQ9Y6Y0 642 aa8.91□□□□□ -0.98
RFC1-216ENST00000514572 FMNL1O95466 1100 aaPredicted RBP8.9□□□□□ -0.98
RFC1-216ENST00000514572 MSS51Q4VC12 460 aa8.9□□□□□ -0.98
RFC1-216ENST00000514572 SND1Q7KZF4 910 aaKnown RBP eCLIP8.9□□□□□ -0.98
RFC1-216ENST00000514572 HCSTQ9UBK5 93 aa8.9□□□□□ -0.98
RFC1-216ENST00000514572 GPSM3Q9Y4H4 160 aa8.9□□□□□ -0.98
RFC1-216ENST00000514572 USP17L5A8MUK1 530 aa8.89□□□□□ -0.99
RFC1-216ENST00000514572 DXOO77932 396 aaKnown RBP8.89□□□□□ -0.99
RFC1-216ENST00000514572 TMEM164Q5U3C3 297 aa8.89□□□□□ -0.99
RFC1-216ENST00000514572 STK32AQ8WU08 396 aa8.89□□□□□ -0.99
RFC1-216ENST00000514572 NR1I2O75469 434 aa8.88□□□□□ -0.99
RFC1-216ENST00000514572 PHTF2Q8N3S3 785 aa8.88□□□□□ -0.99
RFC1-216ENST00000514572 ANKK1Q8NFD2 765 aa8.88□□□□□ -0.99
RFC1-216ENST00000514572 KCTD12Q96CX2 325 aaKnown RBP8.88□□□□□ -0.99
RFC1-216ENST00000514572 CHIC2Q9UKJ5 165 aa8.88□□□□□ -0.99
RFC1-216ENST00000514572 HPS5Q9UPZ3 1129 aa8.88□□□□□ -0.99
RFC1-216ENST00000514572 FAM196BA6NMK8 535 aa8.87□□□□□ -0.99
RFC1-216ENST00000514572 MMP16P51512 607 aa8.87□□□□□ -0.99
RFC1-216ENST00000514572 FOXD4L5Q5VV16 416 aaPredicted RBP8.87□□□□□ -0.99
RFC1-216ENST00000514572 PHLDB3Q6NSJ2 640 aa8.87□□□□□ -0.99
RFC1-216ENST00000514572 FOXD4L4Q8WXT5 416 aaPredicted RBP8.87□□□□□ -0.99
RFC1-216ENST00000514572 GPKOWQ92917 476 aaPredicted RBP eCLIP8.87□□□□□ -0.99
RFC1-216ENST00000514572 TSR3Q9UJK0 312 aaKnown RBP8.87□□□□□ -0.99
RFC1-216ENST00000514572 PCDHB3Q9Y5E6 796 aa8.87□□□□□ -0.99
RFC1-216ENST00000514572 CCNYL3P0C7X3 344 aa8.86□□□□□ -0.99
RFC1-216ENST00000514572 BCAMP50895 628 aa8.86□□□□□ -0.99
RFC1-216ENST00000514572 PPP4CP60510 307 aa8.86□□□□□ -0.99
RFC1-216ENST00000514572 PDXDC2PQ6P474 469 aa8.86□□□□□ -0.99
RFC1-216ENST00000514572 FAM160A2Q8N612 972 aaPredicted RBP8.86□□□□□ -0.99
RFC1-216ENST00000514572 EVA1BQ9NVM1 165 aa8.86□□□□□ -0.99
RFC1-216ENST00000514572 NOVA2Q9UNW9 492 aaKnown RBP8.86□□□□□ -0.99
RFC1-216ENST00000514572 SKIP12755 728 aa8.85□□□□□ -0.99
RFC1-216ENST00000514572 FAM69CQ0P6D2 419 aa8.85□□□□□ -0.99
RFC1-216ENST00000514572 CRTC2Q53ET0 693 aaPredicted RBP8.85□□□□□ -0.99
RFC1-216ENST00000514572 B4GALNT3Q6L9W6 998 aa8.85□□□□□ -0.99
RFC1-216ENST00000514572 TXNDC2Q86VQ3 553 aa8.85□□□□□ -0.99
RFC1-216ENST00000514572 SLAIN2Q9P270 581 aa8.85□□□□□ -0.99
RFC1-216ENST00000514572 CEP126Q9P2H0 1117 aa8.85□□□□□ -0.99
RFC1-216ENST00000514572 USP17L15C9J2P7 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 USP17L10C9JJH3 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 USP17L13C9JLJ4 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 USP17L12C9JPN9 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 USP17L11C9JVI0 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 USP17L21D6R901 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 USP17L18D6R9N7 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 USP17L22D6RA61 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 USP17L17D6RBQ6 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 USP17L19D6RCP7 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 USP17L20D6RJB6 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 USP17L24Q0WX57 530 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 ZNF592Q92610 1267 aa8.84□□□□□ -0.99
RFC1-216ENST00000514572 MCCD1P59942 119 aaPredicted RBP8.83□□□□□ -1
RFC1-216ENST00000514572 KCNH2Q12809 1159 aa8.83□□□□□ -1
RFC1-216ENST00000514572 PTK7Q13308 1070 aa8.83□□□□□ -1
RFC1-216ENST00000514572 CCDC27Q2M243 656 aa8.83□□□□□ -1
RFC1-216ENST00000514572 ARMC2Q8NEN0 867 aa8.83□□□□□ -1
RFC1-216ENST00000514572 PTK2Q05397 1052 aa8.82□□□□□ -1
RFC1-216ENST00000514572 ZNF428Q96B54 188 aa8.82□□□□□ -1
RFC1-216ENST00000514572 NUDT12Q9BQG2 462 aa8.82□□□□□ -1
RFC1-216ENST00000514572 AMOTL2Q9Y2J4 779 aa8.82□□□□□ -1
RFC1-216ENST00000514572 LZTS3O60299 673 aaPredicted RBP8.81□□□□□ -1
RFC1-216ENST00000514572 SSFA2P28290 1259 aa8.81□□□□□ -1
RFC1-216ENST00000514572 CTHP32929 405 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms