RNA–Protein interactions for RNA: ENST00000514552.5

PDE4D-222, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-222ENST00000514552 TLL1O43897 1013 aa12.09□□□□□ -0.47
PDE4D-222ENST00000514552 RTL5Q5HYW3 569 aaPredicted RBP12.09□□□□□ -0.47
PDE4D-222ENST00000514552 CYB5RLQ6IPT4 315 aa12.09□□□□□ -0.47
PDE4D-222ENST00000514552 CHMP7Q8WUX9 453 aaPredicted RBP12.09□□□□□ -0.47
PDE4D-222ENST00000514552 MSS51Q4VC12 460 aa12.08□□□□□ -0.48
PDE4D-222ENST00000514552 FBXO31Q5XUX0 539 aaPredicted RBP12.08□□□□□ -0.48
PDE4D-222ENST00000514552 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
PDE4D-222ENST00000514552 RFC5P40937 340 aa12.07□□□□□ -0.48
PDE4D-222ENST00000514552 WRNQ14191 1432 aaPredicted RBP eCLIP12.07□□□□□ -0.48
PDE4D-222ENST00000514552 PRR7Q8TB68 274 aa12.07□□□□□ -0.48
PDE4D-222ENST00000514552 TOP2BQ02880 1626 aa12.07□□□□□ -0.48
PDE4D-222ENST00000514552 IFFO2Q5TF58 517 aa12.06□□□□□ -0.48
PDE4D-222ENST00000514552 FAM160A2Q8N612 972 aaPredicted RBP12.06□□□□□ -0.48
PDE4D-222ENST00000514552 TMEM259Q4ZIN3 620 aa12.05□□□□□ -0.48
PDE4D-222ENST00000514552 DESI1Q6ICB0 168 aa12.05□□□□□ -0.48
PDE4D-222ENST00000514552 NKX2-3Q8TAU0 364 aa12.05□□□□□ -0.48
PDE4D-222ENST00000514552 CFAP99D6REC4 459 aa12.04□□□□□ -0.48
PDE4D-222ENST00000514552 PLSCR2Q9NRY7 297 aa12.04□□□□□ -0.48
PDE4D-222ENST00000514552 ADAMTS12P58397 1594 aa12.04□□□□□ -0.48
PDE4D-222ENST00000514552 GRIN2AQ12879 1464 aa12.03□□□□□ -0.48
PDE4D-222ENST00000514552 HELBQ8NG08 1087 aaPredicted RBP12.03□□□□□ -0.48
PDE4D-222ENST00000514552 SLC6A16Q9GZN6 736 aa12.02□□□□□ -0.49
PDE4D-222ENST00000514552 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
PDE4D-222ENST00000514552 JUNDP17535 347 aa12.01□□□□□ -0.49
PDE4D-222ENST00000514552 MMP16P51512 607 aa12.01□□□□□ -0.49
PDE4D-222ENST00000514552 BANK1Q8NDB2 785 aa12.01□□□□□ -0.49
PDE4D-222ENST00000514552 NUP160Q12769 1436 aa12.01□□□□□ -0.49
PDE4D-222ENST00000514552 DXOO77932 396 aaKnown RBP12□□□□□ -0.49
PDE4D-222ENST00000514552 PLA2G2EQ9NZK7 142 aa12□□□□□ -0.49
PDE4D-222ENST00000514552 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
PDE4D-222ENST00000514552 AP1G2O75843 785 aa11.99□□□□□ -0.49
PDE4D-222ENST00000514552 SHROOM2Q13796 1616 aa11.98□□□□□ -0.49
PDE4D-222ENST00000514552 FHAD1B1AJZ9 1412 aa11.98□□□□□ -0.49
PDE4D-222ENST00000514552 SUPT5HO00267 1087 aaKnown RBP11.98□□□□□ -0.49
PDE4D-222ENST00000514552 S1PR4O95977 384 aa11.98□□□□□ -0.49
PDE4D-222ENST00000514552 TSC1Q92574 1164 aa11.98□□□□□ -0.49
PDE4D-222ENST00000514552 PRDM9Q9NQV7 894 aa11.98□□□□□ -0.49
PDE4D-222ENST00000514552 GGCXP38435 758 aa11.97□□□□□ -0.49
PDE4D-222ENST00000514552 CEP170Q5SW79 1584 aa11.96□□□□□ -0.49
PDE4D-222ENST00000514552 LYPD8Q6UX82 237 aa11.96□□□□□ -0.49
PDE4D-222ENST00000514552 CTDSPL2Q05D32 466 aa11.95□□□□□ -0.5
PDE4D-222ENST00000514552 PTPRNQ16849 979 aa11.95□□□□□ -0.5
PDE4D-222ENST00000514552 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
PDE4D-222ENST00000514552 SOCS7O14512 581 aa11.92□□□□□ -0.5
PDE4D-222ENST00000514552 PER1O15534 1290 aaPredicted RBP11.92□□□□□ -0.5
PDE4D-222ENST00000514552 FLIIQ13045 1269 aa11.92□□□□□ -0.5
PDE4D-222ENST00000514552 PPP1R18Q6NYC8 613 aa11.92□□□□□ -0.5
PDE4D-222ENST00000514552 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.92□□□□□ -0.5
PDE4D-222ENST00000514552 NUDT12Q9BQG2 462 aa11.91□□□□□ -0.5
PDE4D-222ENST00000514552 RNF223E7ERA6 249 aa11.9□□□□□ -0.5
PDE4D-222ENST00000514552 CCNYL3P0C7X3 344 aa11.9□□□□□ -0.5
PDE4D-222ENST00000514552 ANKLE1Q8NAG6 615 aa11.9□□□□□ -0.5
PDE4D-222ENST00000514552 ERCC6L2Q5T890 1561 aa11.89□□□□□ -0.51
PDE4D-222ENST00000514552 LRRN4Q8WUT4 740 aa11.89□□□□□ -0.51
PDE4D-222ENST00000514552 RUSC2Q8N2Y8 1516 aa11.88□□□□□ -0.51
PDE4D-222ENST00000514552 A0A0G2JS52 829 aa11.88□□□□□ -0.51
PDE4D-222ENST00000514552 MCM6Q14566 821 aa11.88□□□□□ -0.51
PDE4D-222ENST00000514552 SNRKQ9NRH2 765 aa11.88□□□□□ -0.51
PDE4D-222ENST00000514552 EVA1BQ9NVM1 165 aa11.88□□□□□ -0.51
PDE4D-222ENST00000514552 FCF1Q9Y324 198 aaKnown RBP11.88□□□□□ -0.51
PDE4D-222ENST00000514552 APBB1O00213 710 aa11.87□□□□□ -0.51
PDE4D-222ENST00000514552 PPEF1O14829 653 aaPredicted RBP11.86□□□□□ -0.51
PDE4D-222ENST00000514552 F12P00748 615 aaPredicted RBP11.86□□□□□ -0.51
PDE4D-222ENST00000514552 MTMR14Q8NCE2 650 aa11.86□□□□□ -0.51
PDE4D-222ENST00000514552 KCNH2Q12809 1159 aa11.85□□□□□ -0.51
PDE4D-222ENST00000514552 CCDC24Q8N4L8 307 aa11.85□□□□□ -0.51
PDE4D-222ENST00000514552 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
PDE4D-222ENST00000514552 CUL7Q14999 1698 aa11.84□□□□□ -0.51
PDE4D-222ENST00000514552 CTHP32929 405 aa11.83□□□□□ -0.52
PDE4D-222ENST00000514552 PRG4Q92954 1404 aaPredicted RBP11.83□□□□□ -0.52
PDE4D-222ENST00000514552 MAP10Q9P2G4 905 aa11.82□□□□□ -0.52
PDE4D-222ENST00000514552 GJD4Q96KN9 370 aaPredicted RBP11.81□□□□□ -0.52
PDE4D-222ENST00000514552 TRIM34Q9BYJ4 488 aa11.81□□□□□ -0.52
PDE4D-222ENST00000514552 KIF27Q86VH2 1401 aa11.8□□□□□ -0.52
PDE4D-222ENST00000514552 NR6A1Q15406 480 aa11.8□□□□□ -0.52
PDE4D-222ENST00000514552 PRM3Q9NNZ6 103 aa11.8□□□□□ -0.52
PDE4D-222ENST00000514552 PLA2G2CQ5R387 149 aa11.79□□□□□ -0.52
PDE4D-222ENST00000514552 PTCRAQ6ISU1 281 aaPredicted RBP11.79□□□□□ -0.52
PDE4D-222ENST00000514552 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
PDE4D-222ENST00000514552 MAPKBP1O60336 1514 aa11.79□□□□□ -0.52
PDE4D-222ENST00000514552 KIAA0586Q9BVV6 1533 aa11.79□□□□□ -0.52
PDE4D-222ENST00000514552 ZBTB24O43167 697 aaPredicted RBP11.78□□□□□ -0.52
PDE4D-222ENST00000514552 ARMC2Q8NEN0 867 aa11.78□□□□□ -0.52
PDE4D-222ENST00000514552 UNC93B1Q9H1C4 597 aa11.78□□□□□ -0.52
PDE4D-222ENST00000514552 RPIAP49247 311 aa11.77□□□□□ -0.53
PDE4D-222ENST00000514552 EPS8L1Q8TE68 723 aa11.77□□□□□ -0.53
PDE4D-222ENST00000514552 NDUFB9Q9Y6M9 179 aa11.77□□□□□ -0.53
PDE4D-222ENST00000514552 KIF13AQ9H1H9 1805 aa11.76□□□□□ -0.53
PDE4D-222ENST00000514552 UBTFP17480 764 aaKnown RBP11.76□□□□□ -0.53
PDE4D-222ENST00000514552 IGF1RP08069 1367 aa11.76□□□□□ -0.53
PDE4D-222ENST00000514552 FKBPLQ9UIM3 349 aa11.75□□□□□ -0.53
PDE4D-222ENST00000514552 ZC3H4Q9UPT8 1303 aaKnown RBP11.75□□□□□ -0.53
PDE4D-222ENST00000514552 ERICH6Q7L0X2 663 aa11.74□□□□□ -0.53
PDE4D-222ENST00000514552 ABCC10Q5T3U5 1492 aa11.74□□□□□ -0.53
PDE4D-222ENST00000514552 SLC19A1P41440 591 aa11.73□□□□□ -0.53
PDE4D-222ENST00000514552 LIAT1Q6ZQX7 453 aa11.73□□□□□ -0.53
PDE4D-222ENST00000514552 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.53
PDE4D-222ENST00000514552 ADCY10Q96PN6 1610 aa11.73□□□□□ -0.53
PDE4D-222ENST00000514552 RAD21O60216 631 aa11.72□□□□□ -0.53
PDE4D-222ENST00000514552 TRIM32Q13049 653 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms