RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 NDUFV2P19404 249 aa12.64□□□□□ -0.39
DDX60-205ENST00000513997 QPCTQ16769 361 aa12.64□□□□□ -0.39
DDX60-205ENST00000513997 BCL2L13Q9BXK5 485 aa12.64□□□□□ -0.39
DDX60-205ENST00000513997 HOXA2O43364 376 aa12.63□□□□□ -0.39
DDX60-205ENST00000513997 SMARCA5O60264 1052 aaPredicted RBP12.63□□□□□ -0.39
DDX60-205ENST00000513997 VAC14Q08AM6 782 aa12.63□□□□□ -0.39
DDX60-205ENST00000513997 CSPP1Q1MSJ5 1256 aa12.63□□□□□ -0.39
DDX60-205ENST00000513997 GPR37L1O60883 481 aa12.62□□□□□ -0.39
DDX60-205ENST00000513997 FUT2Q10981 343 aa12.62□□□□□ -0.39
DDX60-205ENST00000513997 KMT5BQ4FZB7 885 aa12.62□□□□□ -0.39
DDX60-205ENST00000513997 THSD4Q6ZMP0 1018 aa12.62□□□□□ -0.39
DDX60-205ENST00000513997 KCTD12Q96CX2 325 aaKnown RBP12.62□□□□□ -0.39
DDX60-205ENST00000513997 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
DDX60-205ENST00000513997 GJA5P36382 358 aa12.61□□□□□ -0.39
DDX60-205ENST00000513997 NOM1Q5C9Z4 860 aaKnown RBP12.61□□□□□ -0.39
DDX60-205ENST00000513997 RTL5Q5HYW3 569 aaPredicted RBP12.61□□□□□ -0.39
DDX60-205ENST00000513997 MAFBQ9Y5Q3 323 aaPredicted RBP12.61□□□□□ -0.39
DDX60-205ENST00000513997 ACTN4O43707 911 aaKnown RBP12.6□□□□□ -0.39
DDX60-205ENST00000513997 WBP1LQ9NX94 342 aa12.6□□□□□ -0.39
DDX60-205ENST00000513997 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
DDX60-205ENST00000513997 APLP1P51693 650 aa12.58□□□□□ -0.4
DDX60-205ENST00000513997 GIPC2Q8TF65 315 aa12.58□□□□□ -0.4
DDX60-205ENST00000513997 HLA-CQ95604 372 aa12.58□□□□□ -0.4
DDX60-205ENST00000513997 PRR14Q9BWN1 585 aa12.58□□□□□ -0.4
DDX60-205ENST00000513997 PCDHB15Q9Y5E8 787 aa12.58□□□□□ -0.4
DDX60-205ENST00000513997 GRIPAP1Q4V328 841 aa12.57□□□□□ -0.4
DDX60-205ENST00000513997 PHLDB3Q6NSJ2 640 aa12.57□□□□□ -0.4
DDX60-205ENST00000513997 FDX1P10109 184 aa12.56□□□□□ -0.4
DDX60-205ENST00000513997 GUCA2AQ02747 115 aa12.56□□□□□ -0.4
DDX60-205ENST00000513997 ELOAQ14241 798 aaKnown RBP12.56□□□□□ -0.4
DDX60-205ENST00000513997 POLR3GLQ9BT43 218 aa12.56□□□□□ -0.4
DDX60-205ENST00000513997 PCDHGC3Q9UN70 934 aa12.56□□□□□ -0.4
DDX60-205ENST00000513997 SOX11P35716 441 aa12.55□□□□□ -0.4
DDX60-205ENST00000513997 PRR7Q8TB68 274 aa12.55□□□□□ -0.4
DDX60-205ENST00000513997 CADPSQ9ULU8 1353 aa12.55□□□□□ -0.4
DDX60-205ENST00000513997 ZC3H6P61129 1189 aaKnown RBP12.54□□□□□ -0.4
DDX60-205ENST00000513997 PUS10Q3MIT2 529 aaKnown RBP12.54□□□□□ -0.4
DDX60-205ENST00000513997 MORN1Q5T089 497 aa12.54□□□□□ -0.4
DDX60-205ENST00000513997 TRIM34Q9BYJ4 488 aa12.54□□□□□ -0.4
DDX60-205ENST00000513997 VAMP1P23763 118 aa12.53□□□□□ -0.4
DDX60-205ENST00000513997 ARID4AP29374 1257 aaPredicted RBP12.53□□□□□ -0.4
DDX60-205ENST00000513997 TMEM164Q5U3C3 297 aa12.53□□□□□ -0.4
DDX60-205ENST00000513997 UBXN4Q92575 508 aa12.53□□□□□ -0.4
DDX60-205ENST00000513997 NUTM2BA6NNL0 878 aaPredicted RBP12.52□□□□□ -0.41
DDX60-205ENST00000513997 NUTM2EB1AL46 878 aaPredicted RBP12.52□□□□□ -0.41
DDX60-205ENST00000513997 NUTM2DQ5VT03 806 aaPredicted RBP12.52□□□□□ -0.41
DDX60-205ENST00000513997 NUTM2AQ8IVF1 878 aaPredicted RBP12.52□□□□□ -0.41
DDX60-205ENST00000513997 ZMIZ1Q9ULJ6 1067 aa12.52□□□□□ -0.41
DDX60-205ENST00000513997 SOWAHDA6NJG2 315 aa12.51□□□□□ -0.41
DDX60-205ENST00000513997 NCLP19338 710 aaKnown RBP12.51□□□□□ -0.41
DDX60-205ENST00000513997 PRPF38BQ5VTL8 546 aaKnown RBP12.51□□□□□ -0.41
DDX60-205ENST00000513997 TBC1D9Q6ZT07 1266 aa12.51□□□□□ -0.41
DDX60-205ENST00000513997 SPNS2Q8IVW8 549 aa12.51□□□□□ -0.41
DDX60-205ENST00000513997 HMX1Q9NP08 348 aaPredicted RBP12.51□□□□□ -0.41
DDX60-205ENST00000513997 PTPN5P54829 565 aa12.5□□□□□ -0.41
DDX60-205ENST00000513997 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
DDX60-205ENST00000513997 CWC22Q9HCG8 908 aaKnown RBP12.5□□□□□ -0.41
DDX60-205ENST00000513997 SLC27A5Q9Y2P5 690 aa12.5□□□□□ -0.41
DDX60-205ENST00000513997 NYAP1Q6ZVC0 841 aa12.49□□□□□ -0.41
DDX60-205ENST00000513997 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
DDX60-205ENST00000513997 STK32AQ8WU08 396 aa12.49□□□□□ -0.41
DDX60-205ENST00000513997 PCDHB3Q9Y5E6 796 aa12.49□□□□□ -0.41
DDX60-205ENST00000513997 ATP9BO43861 1147 aa12.48□□□□□ -0.41
DDX60-205ENST00000513997 KANK4Q5T7N3 995 aaPredicted RBP12.48□□□□□ -0.41
DDX60-205ENST00000513997 NPAS4Q8IUM7 802 aa12.48□□□□□ -0.41
DDX60-205ENST00000513997 ANKRD13AQ8IZ07 590 aa12.48□□□□□ -0.41
DDX60-205ENST00000513997 ZBTB3Q9H5J0 574 aa12.48□□□□□ -0.41
DDX60-205ENST00000513997 SF3A1Q15459 793 aaKnown RBP12.47□□□□□ -0.41
DDX60-205ENST00000513997 ZNF326Q5BKZ1 582 aaKnown RBP12.47□□□□□ -0.41
DDX60-205ENST00000513997 SSFA2P28290 1259 aa12.46□□□□□ -0.41
DDX60-205ENST00000513997 SCUBE3Q8IX30 993 aa12.46□□□□□ -0.41
DDX60-205ENST00000513997 SEMA3FQ13275 785 aa12.45□□□□□ -0.42
DDX60-205ENST00000513997 MTMR2Q13614 643 aa12.45□□□□□ -0.42
DDX60-205ENST00000513997 NAALADL2Q58DX5 795 aa12.45□□□□□ -0.42
DDX60-205ENST00000513997 BLOC1S3Q6QNY0 202 aa12.45□□□□□ -0.42
DDX60-205ENST00000513997 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
DDX60-205ENST00000513997 PPP1R1BQ9UD71 204 aaPredicted RBP12.45□□□□□ -0.42
DDX60-205ENST00000513997 ANKRD33BA6NCL7 494 aa12.44□□□□□ -0.42
DDX60-205ENST00000513997 C6orf229H3BNL8 230 aa12.44□□□□□ -0.42
DDX60-205ENST00000513997 DHX37Q8IY37 1157 aaKnown RBP12.44□□□□□ -0.42
DDX60-205ENST00000513997 NOVA2Q9UNW9 492 aaKnown RBP12.44□□□□□ -0.42
DDX60-205ENST00000513997 NR1I2O75469 434 aa12.43□□□□□ -0.42
DDX60-205ENST00000513997 Q3C1V9 767 aa12.43□□□□□ -0.42
DDX60-205ENST00000513997 SALL2Q9Y467 1007 aaPredicted RBP12.43□□□□□ -0.42
DDX60-205ENST00000513997 RNF166Q96A37 237 aaPredicted RBP12.42□□□□□ -0.42
DDX60-205ENST00000513997 CTDSPL2Q05D32 466 aa12.41□□□□□ -0.42
DDX60-205ENST00000513997 BRICD5Q6PL45 260 aa12.41□□□□□ -0.42
DDX60-205ENST00000513997 RNF19BQ6ZMZ0 732 aa12.41□□□□□ -0.42
DDX60-205ENST00000513997 THAP11Q96EK4 314 aa12.41□□□□□ -0.42
DDX60-205ENST00000513997 COPS2P61201 443 aa12.4□□□□□ -0.42
DDX60-205ENST00000513997 ANKRD62A6NC57 917 aa12.39□□□□□ -0.43
DDX60-205ENST00000513997 CFAP99D6REC4 459 aa12.39□□□□□ -0.43
DDX60-205ENST00000513997 RECKO95980 971 aa12.39□□□□□ -0.43
DDX60-205ENST00000513997 SERPINB4P48594 390 aa12.39□□□□□ -0.43
DDX60-205ENST00000513997 RETREG3Q86VR2 466 aa12.39□□□□□ -0.43
DDX60-205ENST00000513997 SLAIN2Q9P270 581 aa12.39□□□□□ -0.43
DDX60-205ENST00000513997 MTRQ99707 1265 aa12.38□□□□□ -0.43
DDX60-205ENST00000513997 HCSTQ9UBK5 93 aa12.38□□□□□ -0.43
DDX60-205ENST00000513997 BIN2Q9UBW5 565 aaPredicted RBP12.38□□□□□ -0.43
DDX60-205ENST00000513997 FMNL1O95466 1100 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms