RNA–Protein interactions for RNA: ENST00000513846.1

GAPDHP60-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 60, humanhuman

BASIC

Gene GAPDHP60, Length 995 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP60-201ENST00000513846 FNBP4Q8N3X1 1017 aaPredicted RBP13.85□□□□□ -0.19
GAPDHP60-201ENST00000513846 PCGF6Q9BYE7 350 aa13.85□□□□□ -0.19
GAPDHP60-201ENST00000513846 CDK12Q9NYV4 1490 aaPredicted RBP13.85□□□□□ -0.19
GAPDHP60-201ENST00000513846 ACEP12821 1306 aa13.85□□□□□ -0.19
GAPDHP60-201ENST00000513846 ARHGEF10O15013 1369 aa13.84□□□□□ -0.19
GAPDHP60-201ENST00000513846 MON2Q7Z3U7 1717 aa13.84□□□□□ -0.19
GAPDHP60-201ENST00000513846 COL14A1Q05707 1796 aaKnown RBP13.84□□□□□ -0.19
GAPDHP60-201ENST00000513846 NGDNQ8NEJ9 315 aaKnown RBP13.84□□□□□ -0.19
GAPDHP60-201ENST00000513846 QTRT2Q9H974 415 aaKnown RBP13.84□□□□□ -0.19
GAPDHP60-201ENST00000513846 USP21Q9UK80 565 aa13.84□□□□□ -0.19
GAPDHP60-201ENST00000513846 RXRBP28702 533 aa13.83□□□□□ -0.2
GAPDHP60-201ENST00000513846 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
GAPDHP60-201ENST00000513846 NUTM2GQ5VZR2 741 aa13.82□□□□□ -0.2
GAPDHP60-201ENST00000513846 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
GAPDHP60-201ENST00000513846 LMO7Q8WWI1 1683 aa13.8□□□□□ -0.2
GAPDHP60-201ENST00000513846 PLEKHG3A1L390 1219 aa13.8□□□□□ -0.2
GAPDHP60-201ENST00000513846 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
GAPDHP60-201ENST00000513846 CCDC61Q9Y6R9 512 aa13.8□□□□□ -0.2
GAPDHP60-201ENST00000513846 USP6P35125 1406 aa13.8□□□□□ -0.2
GAPDHP60-201ENST00000513846 RBM6P78332 1123 aaKnown RBP13.79□□□□□ -0.2
GAPDHP60-201ENST00000513846 SSH2Q76I76 1423 aa13.79□□□□□ -0.2
GAPDHP60-201ENST00000513846 CD163L1Q9NR16 1453 aa13.79□□□□□ -0.2
GAPDHP60-201ENST00000513846 FAM83GA6ND36 823 aa13.78□□□□□ -0.2
GAPDHP60-201ENST00000513846 CABP1Q9NZU7 370 aa13.78□□□□□ -0.2
GAPDHP60-201ENST00000513846 TRPC5Q9UL62 973 aaPredicted RBP13.78□□□□□ -0.2
GAPDHP60-201ENST00000513846 RGPD5Q99666 1765 aa13.78□□□□□ -0.2
GAPDHP60-201ENST00000513846 SLIT3O75094 1523 aa13.77□□□□□ -0.21
GAPDHP60-201ENST00000513846 HAP1P54257 671 aaPredicted RBP13.77□□□□□ -0.21
GAPDHP60-201ENST00000513846 EVC2Q86UK5 1308 aa13.77□□□□□ -0.21
GAPDHP60-201ENST00000513846 SBNO2Q9Y2G9 1366 aa13.77□□□□□ -0.21
GAPDHP60-201ENST00000513846 KIAA0232Q92628 1395 aa13.76□□□□□ -0.21
GAPDHP60-201ENST00000513846 UNC5CLQ8IV45 518 aa13.76□□□□□ -0.21
GAPDHP60-201ENST00000513846 COL18A1P39060 1754 aa13.76□□□□□ -0.21
GAPDHP60-201ENST00000513846 MYOM1P52179 1685 aa13.75□□□□□ -0.21
GAPDHP60-201ENST00000513846 USP54Q70EL1 1684 aa13.75□□□□□ -0.21
GAPDHP60-201ENST00000513846 USP19O94966 1318 aa13.75□□□□□ -0.21
GAPDHP60-201ENST00000513846 CHRNA2Q15822 529 aa13.75□□□□□ -0.21
GAPDHP60-201ENST00000513846 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
GAPDHP60-201ENST00000513846 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
GAPDHP60-201ENST00000513846 UPF1Q92900 1129 aaKnown RBP eCLIP13.74□□□□□ -0.21
GAPDHP60-201ENST00000513846 GJD4Q96KN9 370 aaPredicted RBP13.74□□□□□ -0.21
GAPDHP60-201ENST00000513846 TESK2Q96S53 571 aa13.74□□□□□ -0.21
GAPDHP60-201ENST00000513846 CAMTA1Q9Y6Y1 1673 aa13.74□□□□□ -0.21
GAPDHP60-201ENST00000513846 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
GAPDHP60-201ENST00000513846 WNK3Q9BYP7 1800 aa13.72□□□□□ -0.21
GAPDHP60-201ENST00000513846 ZC3H6P61129 1189 aaKnown RBP13.72□□□□□ -0.21
GAPDHP60-201ENST00000513846 NFAT5O94916 1531 aa13.72□□□□□ -0.21
GAPDHP60-201ENST00000513846 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
GAPDHP60-201ENST00000513846 USP47Q96K76 1375 aa13.71□□□□□ -0.21
GAPDHP60-201ENST00000513846 LTN1O94822 1766 aa13.71□□□□□ -0.21
GAPDHP60-201ENST00000513846 ST20-MTHFSA0A0A6YYL1 179 aa13.71□□□□□ -0.21
GAPDHP60-201ENST00000513846 VPS72Q15906 364 aa13.71□□□□□ -0.21
GAPDHP60-201ENST00000513846 ABTB2Q8N961 1025 aa13.71□□□□□ -0.21
GAPDHP60-201ENST00000513846 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
GAPDHP60-201ENST00000513846 PRDM11Q9NQV5 511 aa13.7□□□□□ -0.22
GAPDHP60-201ENST00000513846 TTC21BQ7Z4L5 1316 aa13.69□□□□□ -0.22
GAPDHP60-201ENST00000513846 A0A1W2PP64 1363 aa13.69□□□□□ -0.22
GAPDHP60-201ENST00000513846 SLC12A5Q9H2X9 1139 aa13.68□□□□□ -0.22
GAPDHP60-201ENST00000513846 CPDO75976 1380 aa13.68□□□□□ -0.22
GAPDHP60-201ENST00000513846 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
GAPDHP60-201ENST00000513846 COL5A2P05997 1499 aaPredicted RBP13.67□□□□□ -0.22
GAPDHP60-201ENST00000513846 CCDC9Q9Y3X0 531 aaKnown RBP13.67□□□□□ -0.22
GAPDHP60-201ENST00000513846 SPATA31A5Q5VU36 1347 aa13.66□□□□□ -0.22
GAPDHP60-201ENST00000513846 SPATA31A7Q8IWB4 1347 aa13.66□□□□□ -0.22
GAPDHP60-201ENST00000513846 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
GAPDHP60-201ENST00000513846 GCP02774 474 aa13.66□□□□□ -0.22
GAPDHP60-201ENST00000513846 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
GAPDHP60-201ENST00000513846 TNS1Q9HBL0 1735 aaKnown RBP13.66□□□□□ -0.22
GAPDHP60-201ENST00000513846 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
GAPDHP60-201ENST00000513846 KIF20BQ96Q89 1820 aa13.65□□□□□ -0.22
GAPDHP60-201ENST00000513846 ZBTB7CA1YPR0 619 aa13.65□□□□□ -0.22
GAPDHP60-201ENST00000513846 SOX12O15370 315 aa13.65□□□□□ -0.22
GAPDHP60-201ENST00000513846 NLRP6P59044 892 aa13.65□□□□□ -0.22
GAPDHP60-201ENST00000513846 NME9Q86XW9 330 aa13.65□□□□□ -0.22
GAPDHP60-201ENST00000513846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
GAPDHP60-201ENST00000513846 SEPT12Q8IYM1 358 aa13.65□□□□□ -0.22
GAPDHP60-201ENST00000513846 CCER1Q8TC90 406 aaPredicted RBP13.65□□□□□ -0.22
GAPDHP60-201ENST00000513846 TMC1Q8TDI8 760 aa13.65□□□□□ -0.22
GAPDHP60-201ENST00000513846 STRN4Q9NRL3 753 aa13.65□□□□□ -0.22
GAPDHP60-201ENST00000513846 LRRC37A3O60309 1634 aa13.64□□□□□ -0.23
GAPDHP60-201ENST00000513846 NLRP13Q86W25 1043 aa13.64□□□□□ -0.23
GAPDHP60-201ENST00000513846 PARP4Q9UKK3 1724 aaKnown RBP13.64□□□□□ -0.23
GAPDHP60-201ENST00000513846 OVOS2A0A0J9YW53 1432 aa13.64□□□□□ -0.23
GAPDHP60-201ENST00000513846 OVOS2Q6IE36 1432 aa13.64□□□□□ -0.23
GAPDHP60-201ENST00000513846 SPATA31A1Q5TZJ5 1347 aa13.64□□□□□ -0.23
GAPDHP60-201ENST00000513846 FAM182BQ5T319 152 aa13.63□□□□□ -0.23
GAPDHP60-201ENST00000513846 LARP1Q6PKG0 1096 aaKnown RBP13.63□□□□□ -0.23
GAPDHP60-201ENST00000513846 EDC4Q6P2E9 1401 aaKnown RBP13.63□□□□□ -0.23
GAPDHP60-201ENST00000513846 ONECUT3O60422 494 aaPredicted RBP13.62□□□□□ -0.23
GAPDHP60-201ENST00000513846 RGPD2P0DJD1 1756 aa13.62□□□□□ -0.23
GAPDHP60-201ENST00000513846 TTC21AQ8NDW8 1320 aa13.62□□□□□ -0.23
GAPDHP60-201ENST00000513846 AXIN2Q9Y2T1 843 aa13.61□□□□□ -0.23
GAPDHP60-201ENST00000513846 RGPD1P0DJD0 1748 aa13.61□□□□□ -0.23
GAPDHP60-201ENST00000513846 USP31Q70CQ4 1352 aa13.6□□□□□ -0.23
GAPDHP60-201ENST00000513846 A0A0G2JS52 829 aa13.6□□□□□ -0.23
GAPDHP60-201ENST00000513846 MYT1Q01538 1121 aa13.6□□□□□ -0.23
GAPDHP60-201ENST00000513846 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
GAPDHP60-201ENST00000513846 PEAK1Q9H792 1746 aa13.6□□□□□ -0.23
GAPDHP60-201ENST00000513846 USP35Q9P2H5 1018 aa13.6□□□□□ -0.23
GAPDHP60-201ENST00000513846 AATKQ6ZMQ8 1374 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms