RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 COL14A1Q05707 1796 aaKnown RBP16.89■□□□□ 0.3
RNF4-218ENST00000513284 TRPM3Q9HCF6 1732 aaPredicted RBP16.89■□□□□ 0.29
RNF4-218ENST00000513284 PRR36Q9H6K5 1346 aa16.87■□□□□ 0.29
RNF4-218ENST00000513284 ALS2Q96Q42 1657 aa16.87■□□□□ 0.29
RNF4-218ENST00000513284 ACIN1Q9UKV3 1341 aaKnown RBP16.86■□□□□ 0.29
RNF4-218ENST00000513284 PARD3Q8TEW0 1356 aa16.86■□□□□ 0.29
RNF4-218ENST00000513284 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
RNF4-218ENST00000513284 ANKARQ7Z5J8 1434 aa16.85■□□□□ 0.29
RNF4-218ENST00000513284 KCNQ2O43526 872 aa16.84■□□□□ 0.29
RNF4-218ENST00000513284 PRDM11Q9NQV5 511 aa16.84■□□□□ 0.29
RNF4-218ENST00000513284 DHX57Q6P158 1386 aaKnown RBP16.84■□□□□ 0.29
RNF4-218ENST00000513284 RREB1Q92766 1687 aa16.83■□□□□ 0.28
RNF4-218ENST00000513284 HIRIP3Q9BW71 556 aaPredicted RBP16.83■□□□□ 0.28
RNF4-218ENST00000513284 SPON1Q9HCB6 807 aa16.83■□□□□ 0.28
RNF4-218ENST00000513284 CRYBG1Q9Y4K1 1723 aa16.83■□□□□ 0.28
RNF4-218ENST00000513284 KIAA0232Q92628 1395 aa16.82■□□□□ 0.28
RNF4-218ENST00000513284 NBPF8Q3BBV2 869 aa16.82■□□□□ 0.28
RNF4-218ENST00000513284 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
RNF4-218ENST00000513284 STRN4Q9NRL3 753 aa16.82■□□□□ 0.28
RNF4-218ENST00000513284 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
RNF4-218ENST00000513284 GPRASP1Q5JY77 1395 aa16.81■□□□□ 0.28
RNF4-218ENST00000513284 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
RNF4-218ENST00000513284 POGKQ9P215 609 aa16.81■□□□□ 0.28
RNF4-218ENST00000513284 BARGINQ6ZT62 677 aa16.8■□□□□ 0.28
RNF4-218ENST00000513284 USP35Q9P2H5 1018 aa16.8■□□□□ 0.28
RNF4-218ENST00000513284 ADGRB2O60241 1585 aa16.8■□□□□ 0.28
RNF4-218ENST00000513284 PAK3O75914 559 aaPredicted RBP16.79■□□□□ 0.28
RNF4-218ENST00000513284 ZC3H6P61129 1189 aaKnown RBP16.79■□□□□ 0.28
RNF4-218ENST00000513284 PPP1R1BQ9UD71 204 aaPredicted RBP16.79■□□□□ 0.28
RNF4-218ENST00000513284 NINLQ9Y2I6 1382 aa16.78■□□□□ 0.28
RNF4-218ENST00000513284 PDE3BQ13370 1112 aa16.78■□□□□ 0.28
RNF4-218ENST00000513284 PDGFDQ9GZP0 370 aaPredicted RBP16.78■□□□□ 0.28
RNF4-218ENST00000513284 CAMTA1Q9Y6Y1 1673 aa16.78■□□□□ 0.28
RNF4-218ENST00000513284 UTRNP46939 3433 aa16.77■□□□□ 0.28
RNF4-218ENST00000513284 MINK1Q8N4C8 1332 aaPredicted RBP16.77■□□□□ 0.28
RNF4-218ENST00000513284 WASLO00401 505 aaPredicted RBP16.77■□□□□ 0.28
RNF4-218ENST00000513284 ZNF784Q8NCA9 323 aaPredicted RBP16.77■□□□□ 0.28
RNF4-218ENST00000513284 NGDNQ8NEJ9 315 aaKnown RBP16.77■□□□□ 0.28
RNF4-218ENST00000513284 DLC1Q96QB1 1528 aa16.76■□□□□ 0.27
RNF4-218ENST00000513284 LARP1Q6PKG0 1096 aaKnown RBP16.76■□□□□ 0.27
RNF4-218ENST00000513284 TRAK1Q9UPV9 953 aa16.76■□□□□ 0.27
RNF4-218ENST00000513284 NUTM2GQ5VZR2 741 aa16.75■□□□□ 0.27
RNF4-218ENST00000513284 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
RNF4-218ENST00000513284 EVA1CP58658 441 aa16.74■□□□□ 0.27
RNF4-218ENST00000513284 PTF1AQ7RTS3 328 aa16.74■□□□□ 0.27
RNF4-218ENST00000513284 ANO8Q9HCE9 1232 aaPredicted RBP16.74■□□□□ 0.27
RNF4-218ENST00000513284 SSH2Q76I76 1423 aa16.73■□□□□ 0.27
RNF4-218ENST00000513284 PROM2Q8N271 834 aa16.73■□□□□ 0.27
RNF4-218ENST00000513284 TCP11L2Q8N4U5 519 aa16.73■□□□□ 0.27
RNF4-218ENST00000513284 ADGRB1O14514 1584 aa16.72■□□□□ 0.27
RNF4-218ENST00000513284 TULP4Q9NRJ4 1543 aa16.72■□□□□ 0.27
RNF4-218ENST00000513284 PTGER2P43116 358 aa16.71■□□□□ 0.27
RNF4-218ENST00000513284 PLSCR1O15162 318 aa16.7■□□□□ 0.26
RNF4-218ENST00000513284 NUDT16Q96DE0 195 aaKnown RBP16.7■□□□□ 0.26
RNF4-218ENST00000513284 PHRF1Q9P1Y6 1649 aaKnown RBP16.69■□□□□ 0.26
RNF4-218ENST00000513284 ZBTB7AO95365 584 aa16.68■□□□□ 0.26
RNF4-218ENST00000513284 THRAP3Q9Y2W1 955 aaKnown RBP16.68■□□□□ 0.26
RNF4-218ENST00000513284 CASZ1Q86V15 1759 aa16.68■□□□□ 0.26
RNF4-218ENST00000513284 EIF3AQ14152 1382 aaKnown RBP16.67■□□□□ 0.26
RNF4-218ENST00000513284 SENP3-EIF4A1A0A087X0R7 540 aa16.66■□□□□ 0.26
RNF4-218ENST00000513284 C1QTNF8P60827 252 aa16.66■□□□□ 0.26
RNF4-218ENST00000513284 SYT17Q9BSW7 474 aa16.66■□□□□ 0.26
RNF4-218ENST00000513284 PEAK1Q9H792 1746 aa16.66■□□□□ 0.26
RNF4-218ENST00000513284 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
RNF4-218ENST00000513284 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
RNF4-218ENST00000513284 CPDO75976 1380 aa16.65■□□□□ 0.26
RNF4-218ENST00000513284 NRKQ7Z2Y5 1582 aa16.65■□□□□ 0.26
RNF4-218ENST00000513284 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
RNF4-218ENST00000513284 ATP7BP35670 1465 aa16.65■□□□□ 0.26
RNF4-218ENST00000513284 ACEP12821 1306 aa16.65■□□□□ 0.26
RNF4-218ENST00000513284 POLR3AO14802 1390 aaPredicted RBP16.64■□□□□ 0.25
RNF4-218ENST00000513284 PARP4Q9UKK3 1724 aaKnown RBP16.63■□□□□ 0.25
RNF4-218ENST00000513284 SGIP1Q9BQI5 828 aa16.63■□□□□ 0.25
RNF4-218ENST00000513284 CDK19Q9BWU1 502 aa16.63■□□□□ 0.25
RNF4-218ENST00000513284 FHDC1Q9C0D6 1143 aaPredicted RBP16.63■□□□□ 0.25
RNF4-218ENST00000513284 BCL11BQ9C0K0 894 aaPredicted RBP16.63■□□□□ 0.25
RNF4-218ENST00000513284 USP19O94966 1318 aa16.63■□□□□ 0.25
RNF4-218ENST00000513284 SBF2Q86WG5 1849 aa16.63■□□□□ 0.25
RNF4-218ENST00000513284 C11orf95C9JLR9 678 aaPredicted RBP16.62■□□□□ 0.25
RNF4-218ENST00000513284 GCP02774 474 aa16.62■□□□□ 0.25
RNF4-218ENST00000513284 ABTB2Q8N961 1025 aa16.62■□□□□ 0.25
RNF4-218ENST00000513284 KDM2AQ9Y2K7 1162 aa16.62■□□□□ 0.25
RNF4-218ENST00000513284 MYOM1P52179 1685 aa16.62■□□□□ 0.25
RNF4-218ENST00000513284 PLEKHG3A1L390 1219 aa16.61■□□□□ 0.25
RNF4-218ENST00000513284 COL5A2P05997 1499 aaPredicted RBP16.61■□□□□ 0.25
RNF4-218ENST00000513284 MARCH10Q8NA82 808 aaPredicted RBP16.6■□□□□ 0.25
RNF4-218ENST00000513284 OVOS2A0A0G2JMS6 1433 aa16.6■□□□□ 0.25
RNF4-218ENST00000513284 OVOS2A0A0J9YW53 1432 aa16.6■□□□□ 0.25
RNF4-218ENST00000513284 OVOS2Q6IE36 1432 aa16.6■□□□□ 0.25
RNF4-218ENST00000513284 CEP350Q5VT06 3117 aa16.59■□□□□ 0.25
RNF4-218ENST00000513284 RGPD3A6NKT7 1758 aaPredicted RBP16.59■□□□□ 0.25
RNF4-218ENST00000513284 RGPD4Q7Z3J3 1758 aa16.59■□□□□ 0.25
RNF4-218ENST00000513284 CCDC61Q9Y6R9 512 aa16.59■□□□□ 0.25
RNF4-218ENST00000513284 DDB1Q16531 1140 aa16.58■□□□□ 0.24
RNF4-218ENST00000513284 CRB1P82279 1406 aa16.58■□□□□ 0.24
RNF4-218ENST00000513284 SLC15A2Q16348 729 aa16.57■□□□□ 0.24
RNF4-218ENST00000513284 TXNRD1Q16881 649 aa16.57■□□□□ 0.24
RNF4-218ENST00000513284 DCAF11Q8TEB1 546 aa16.57■□□□□ 0.24
RNF4-218ENST00000513284 NLRP13Q86W25 1043 aa16.56■□□□□ 0.24
RNF4-218ENST00000513284 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms