RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 C9orf84Q5VXU9 1444 aa19.39■□□□□ 0.69
TRIO-221ENST00000513206 SLC4A3P48751 1232 aa19.38■□□□□ 0.69
TRIO-221ENST00000513206 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
TRIO-221ENST00000513206 SLC3A2P08195 630 aaKnown RBP19.38■□□□□ 0.69
TRIO-221ENST00000513206 PLEKHH2Q8IVE3 1493 aa19.38■□□□□ 0.69
TRIO-221ENST00000513206 FBXO3Q9UK99 471 aa19.38■□□□□ 0.69
TRIO-221ENST00000513206 DDX54Q8TDD1 881 aaKnown RBP19.38■□□□□ 0.69
TRIO-221ENST00000513206 CFTRP13569 1480 aa19.37■□□□□ 0.69
TRIO-221ENST00000513206 CNNM1Q9NRU3 951 aa19.37■□□□□ 0.69
TRIO-221ENST00000513206 GPS2Q13227 327 aa19.37■□□□□ 0.69
TRIO-221ENST00000513206 CABP4P57796 275 aa19.37■□□□□ 0.69
TRIO-221ENST00000513206 SART3Q15020 963 aaKnown RBP19.37■□□□□ 0.69
TRIO-221ENST00000513206 SASS6Q6UVJ0 657 aa19.36■□□□□ 0.69
TRIO-221ENST00000513206 CT47A1Q5JQC4 288 aaPredicted RBP19.36■□□□□ 0.69
TRIO-221ENST00000513206 ZNF592Q92610 1267 aa19.36■□□□□ 0.69
TRIO-221ENST00000513206 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
TRIO-221ENST00000513206 CLASRPQ8N2M8 674 aaKnown RBP19.35■□□□□ 0.69
TRIO-221ENST00000513206 IFT140Q96RY7 1462 aa19.35■□□□□ 0.69
TRIO-221ENST00000513206 CDK19Q9BWU1 502 aa19.35■□□□□ 0.69
TRIO-221ENST00000513206 TAF3Q5VWG9 929 aa19.34■□□□□ 0.69
TRIO-221ENST00000513206 POGZQ7Z3K3 1410 aa19.34■□□□□ 0.69
TRIO-221ENST00000513206 NAP1L1P55209 391 aaKnown RBP19.34■□□□□ 0.69
TRIO-221ENST00000513206 DNMBPQ6XZF7 1577 aa19.34■□□□□ 0.69
TRIO-221ENST00000513206 PSMA5P28066 241 aa19.33■□□□□ 0.69
TRIO-221ENST00000513206 CCDC7Q96M83 1385 aa19.33■□□□□ 0.69
TRIO-221ENST00000513206 EPRSP07814 1512 aaKnown RBP19.33■□□□□ 0.69
TRIO-221ENST00000513206 TMEM132AQ24JP5 1023 aa19.33■□□□□ 0.69
TRIO-221ENST00000513206 WWC2Q6AWC2 1192 aa19.33■□□□□ 0.69
TRIO-221ENST00000513206 ATP2B2Q01814 1243 aa19.33■□□□□ 0.68
TRIO-221ENST00000513206 ANKLE2Q86XL3 938 aa19.33■□□□□ 0.68
TRIO-221ENST00000513206 PANK1Q8TE04 598 aa19.32■□□□□ 0.68
TRIO-221ENST00000513206 CFAP70Q5T0N1 1121 aa19.32■□□□□ 0.68
TRIO-221ENST00000513206 SCAPERQ9BY12 1400 aa19.32■□□□□ 0.68
TRIO-221ENST00000513206 KDM4AO75164 1064 aa19.32■□□□□ 0.68
TRIO-221ENST00000513206 GNL3LQ9NVN8 582 aaKnown RBP19.32■□□□□ 0.68
TRIO-221ENST00000513206 HOMER1Q86YM7 354 aa19.32■□□□□ 0.68
TRIO-221ENST00000513206 IQGAP2Q13576 1575 aa19.32■□□□□ 0.68
TRIO-221ENST00000513206 DNAJC2Q99543 621 aaKnown RBP19.31■□□□□ 0.68
TRIO-221ENST00000513206 FSD1Q9BTV5 496 aa19.31■□□□□ 0.68
TRIO-221ENST00000513206 ZMYND15Q9H091 742 aa19.31■□□□□ 0.68
TRIO-221ENST00000513206 MYL6BP14649 208 aa19.31■□□□□ 0.68
TRIO-221ENST00000513206 RRP12Q5JTH9 1297 aaKnown RBP19.31■□□□□ 0.68
TRIO-221ENST00000513206 MRE11P49959 708 aa19.31■□□□□ 0.68
TRIO-221ENST00000513206 TTC39AQ5SRH9 613 aa19.31■□□□□ 0.68
TRIO-221ENST00000513206 KIF7Q2M1P5 1343 aa19.31■□□□□ 0.68
TRIO-221ENST00000513206 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.3■□□□□ 0.68
TRIO-221ENST00000513206 NCAPD3P42695 1498 aa19.3■□□□□ 0.68
TRIO-221ENST00000513206 TOPBP1Q92547 1522 aa19.3■□□□□ 0.68
TRIO-221ENST00000513206 SURF6O75683 361 aaKnown RBP19.3■□□□□ 0.68
TRIO-221ENST00000513206 ZNF428Q96B54 188 aa19.29■□□□□ 0.68
TRIO-221ENST00000513206 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.29■□□□□ 0.682e-6■■■■■ 149.1
TRIO-221ENST00000513206 PRKAR2BP31323 418 aa19.29■□□□□ 0.68
TRIO-221ENST00000513206 ZFYVE27Q5T4F4 411 aa19.29■□□□□ 0.68
TRIO-221ENST00000513206 CCDC73Q6ZRK6 1079 aa19.29■□□□□ 0.68
TRIO-221ENST00000513206 SPG7Q9UQ90 795 aa19.29■□□□□ 0.68
TRIO-221ENST00000513206 OLFM4Q6UX06 510 aa19.28■□□□□ 0.68
TRIO-221ENST00000513206 GNAI3P08754 354 aa19.28■□□□□ 0.68
TRIO-221ENST00000513206 RBM5P52756 815 aaKnown RBP eCLIP19.28■□□□□ 0.684e-11■■□□□ 12.4
TRIO-221ENST00000513206 CTTNBP2Q8WZ74 1663 aa19.28■□□□□ 0.68
TRIO-221ENST00000513206 ZNF692Q9BU19 519 aaPredicted RBP19.28■□□□□ 0.68
TRIO-221ENST00000513206 CCDC158Q5M9N0 1113 aa19.27■□□□□ 0.68
TRIO-221ENST00000513206 PTPN23Q9H3S7 1636 aa19.27■□□□□ 0.68
TRIO-221ENST00000513206 HIP1O00291 1037 aa19.27■□□□□ 0.68
TRIO-221ENST00000513206 ERBINQ96RT1 1412 aa19.27■□□□□ 0.68
TRIO-221ENST00000513206 GNAI2P04899 355 aa19.27■□□□□ 0.68
TRIO-221ENST00000513206 MPHOSPH8Q99549 860 aa19.27■□□□□ 0.68
TRIO-221ENST00000513206 SULT6B1Q6IMI4 303 aa19.26■□□□□ 0.67
TRIO-221ENST00000513206 CDK5RAP3Q96JB5 506 aa19.26■□□□□ 0.67
TRIO-221ENST00000513206 CWC15Q9P013 229 aaKnown RBP19.26■□□□□ 0.67
TRIO-221ENST00000513206 NUCB2P80303 420 aa19.26■□□□□ 0.67
TRIO-221ENST00000513206 ERC1Q8IUD2 1116 aa19.26■□□□□ 0.67
TRIO-221ENST00000513206 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.26■□□□□ 0.67
TRIO-221ENST00000513206 NAT10Q9H0A0 1025 aaKnown RBP19.26■□□□□ 0.67
TRIO-221ENST00000513206 HDGFL1Q5TGJ6 251 aa19.26■□□□□ 0.67
TRIO-221ENST00000513206 RTEL1-TNFRSF6BF6WH68 1400 aa19.25■□□□□ 0.67
TRIO-221ENST00000513206 C22orf23Q9BZE7 217 aa19.25■□□□□ 0.67
TRIO-221ENST00000513206 TIAM1Q13009 1591 aa19.25■□□□□ 0.67
TRIO-221ENST00000513206 PRDM11Q9NQV5 511 aa19.25■□□□□ 0.67
TRIO-221ENST00000513206 SLC52A1Q9NWF4 448 aa19.25■□□□□ 0.67
TRIO-221ENST00000513206 CCDC57Q2TAC2 916 aa19.24■□□□□ 0.67
TRIO-221ENST00000513206 ADAMTS8Q9UP79 889 aa19.24■□□□□ 0.67
TRIO-221ENST00000513206 BRD4O60885 1362 aaPredicted RBP19.24■□□□□ 0.67
TRIO-221ENST00000513206 RAPGEF3O95398 923 aa19.24■□□□□ 0.67
TRIO-221ENST00000513206 LAMC3Q9Y6N6 1575 aa19.24■□□□□ 0.67
TRIO-221ENST00000513206 OFD1O75665 1012 aa19.24■□□□□ 0.67
TRIO-221ENST00000513206 RBM10P98175 930 aaKnown RBP19.24■□□□□ 0.67
TRIO-221ENST00000513206 SLC26A8Q96RN1 970 aa19.24■□□□□ 0.67
TRIO-221ENST00000513206 STK11IPQ8N1F8 1099 aa19.23■□□□□ 0.67
TRIO-221ENST00000513206 CABP1Q9NZU7 370 aa19.23■□□□□ 0.67
TRIO-221ENST00000513206 TXLNAP40222 546 aa19.23■□□□□ 0.67
TRIO-221ENST00000513206 AAMPQ13685 434 aa19.23■□□□□ 0.67
TRIO-221ENST00000513206 BTBD11A6QL63 1104 aa19.22■□□□□ 0.67
TRIO-221ENST00000513206 TCP11L2Q8N4U5 519 aa19.22■□□□□ 0.67
TRIO-221ENST00000513206 FAM135AQ9P2D6 1515 aa19.22■□□□□ 0.67
TRIO-221ENST00000513206 SIL1Q9H173 461 aa19.22■□□□□ 0.67
TRIO-221ENST00000513206 TWISTNBQ3B726 338 aaPredicted RBP19.22■□□□□ 0.67
TRIO-221ENST00000513206 ITSN2Q9NZM3 1697 aa19.22■□□□□ 0.67
TRIO-221ENST00000513206 NASPP49321 788 aaPredicted RBP19.21■□□□□ 0.67
TRIO-221ENST00000513206 SDF4Q9BRK5 362 aa19.21■□□□□ 0.67
TRIO-221ENST00000513206 HFM1A2PYH4 1435 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms