RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 ESF1Q9H501 851 aaKnown RBP11.64□□□□□ -0.55
PPARGC1A-211ENST00000513205 CLTCQ00610 1675 aaKnown RBP11.64□□□□□ -0.55
PPARGC1A-211ENST00000513205 CENPJQ9HC77 1338 aaPredicted RBP11.63□□□□□ -0.55
PPARGC1A-211ENST00000513205 PER1O15534 1290 aaPredicted RBP11.63□□□□□ -0.55
PPARGC1A-211ENST00000513205 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
PPARGC1A-211ENST00000513205 NLRP13Q86W25 1043 aa11.63□□□□□ -0.55
PPARGC1A-211ENST00000513205 ZBED9Q6R2W3 1325 aa11.62□□□□□ -0.55
PPARGC1A-211ENST00000513205 IDI1Q13907 227 aa11.62□□□□□ -0.55
PPARGC1A-211ENST00000513205 CFAP70Q5T0N1 1121 aa11.62□□□□□ -0.55
PPARGC1A-211ENST00000513205 NINLQ9Y2I6 1382 aa11.62□□□□□ -0.55
PPARGC1A-211ENST00000513205 HDGFP51858 240 aaKnown RBP11.61□□□□□ -0.55
PPARGC1A-211ENST00000513205 MYOM1P52179 1685 aa11.61□□□□□ -0.55
PPARGC1A-211ENST00000513205 HNRNPUQ00839 825 aaKnown RBP eCLIP11.6□□□□□ -0.55
PPARGC1A-211ENST00000513205 TMC1Q8TDI8 760 aa11.6□□□□□ -0.55
PPARGC1A-211ENST00000513205 ASXL1Q8IXJ9 1541 aa11.6□□□□□ -0.55
PPARGC1A-211ENST00000513205 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.6□□□□□ -0.55
PPARGC1A-211ENST00000513205 KNSTRNQ9Y448 316 aa11.6□□□□□ -0.55
PPARGC1A-211ENST00000513205 QRICH2Q9H0J4 1663 aa11.59□□□□□ -0.55
PPARGC1A-211ENST00000513205 LRPPRCP42704 1394 aaKnown RBP11.59□□□□□ -0.55
PPARGC1A-211ENST00000513205 HOXB1P14653 301 aaPredicted RBP11.59□□□□□ -0.55
PPARGC1A-211ENST00000513205 ARHGEF28Q8N1W1 1705 aaKnown RBP11.59□□□□□ -0.55
PPARGC1A-211ENST00000513205 A2ML1A8K2U0 1454 aa11.59□□□□□ -0.55
PPARGC1A-211ENST00000513205 DLC1Q96QB1 1528 aa11.58□□□□□ -0.56
PPARGC1A-211ENST00000513205 NLRP1Q9C000 1473 aa11.58□□□□□ -0.56
PPARGC1A-211ENST00000513205 PANK3Q9H999 370 aa11.58□□□□□ -0.56
PPARGC1A-211ENST00000513205 USP32Q8NFA0 1604 aa11.58□□□□□ -0.56
PPARGC1A-211ENST00000513205 ZMYM3Q14202 1370 aa11.57□□□□□ -0.56
PPARGC1A-211ENST00000513205 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
PPARGC1A-211ENST00000513205 NEFLP07196 543 aa11.56□□□□□ -0.56
PPARGC1A-211ENST00000513205 PNISRQ8TF01 805 aaKnown RBP11.56□□□□□ -0.56
PPARGC1A-211ENST00000513205 EVC2Q86UK5 1308 aa11.55□□□□□ -0.56
PPARGC1A-211ENST00000513205 ZNF710Q8N1W2 664 aa11.55□□□□□ -0.56
PPARGC1A-211ENST00000513205 CFAP65Q6ZU64 1925 aaKnown RBP11.55□□□□□ -0.56
PPARGC1A-211ENST00000513205 NSD2O96028 1365 aa11.55□□□□□ -0.56
PPARGC1A-211ENST00000513205 TNRQ92752 1358 aa11.55□□□□□ -0.56
PPARGC1A-211ENST00000513205 RIMS2Q9UQ26 1411 aa11.54□□□□□ -0.56
PPARGC1A-211ENST00000513205 DOK7Q18PE1 504 aa11.54□□□□□ -0.56
PPARGC1A-211ENST00000513205 ERICH6BQ5W0A0 696 aa11.54□□□□□ -0.56
PPARGC1A-211ENST00000513205 FAM9BQ8IZU0 186 aa11.54□□□□□ -0.56
PPARGC1A-211ENST00000513205 ALKQ9UM73 1620 aa11.54□□□□□ -0.56
PPARGC1A-211ENST00000513205 YTHDC2Q9H6S0 1430 aaKnown RBP11.54□□□□□ -0.56
PPARGC1A-211ENST00000513205 KDM4FA0A1W2PPD8 638 aa11.53□□□□□ -0.56
PPARGC1A-211ENST00000513205 MYO5BQ9ULV0 1848 aa11.53□□□□□ -0.56
PPARGC1A-211ENST00000513205 ATAD2Q6PL18 1390 aa11.53□□□□□ -0.56
PPARGC1A-211ENST00000513205 AMER1Q5JTC6 1135 aaPredicted RBP11.52□□□□□ -0.56
PPARGC1A-211ENST00000513205 PTPRMP28827 1452 aa11.52□□□□□ -0.57
PPARGC1A-211ENST00000513205 CCDC184Q52MB2 194 aa11.52□□□□□ -0.57
PPARGC1A-211ENST00000513205 TRAK1Q9UPV9 953 aa11.52□□□□□ -0.57
PPARGC1A-211ENST00000513205 ANKRD36BQ8N2N9 1353 aa11.51□□□□□ -0.57
PPARGC1A-211ENST00000513205 KNDC1Q76NI1 1749 aa11.51□□□□□ -0.57
PPARGC1A-211ENST00000513205 FBXO31Q5XUX0 539 aaPredicted RBP11.51□□□□□ -0.57
PPARGC1A-211ENST00000513205 SIRT1Q96EB6 747 aa11.51□□□□□ -0.57
PPARGC1A-211ENST00000513205 TECPR2O15040 1411 aa11.5□□□□□ -0.57
PPARGC1A-211ENST00000513205 ABCC11Q96J66 1382 aa11.5□□□□□ -0.57
PPARGC1A-211ENST00000513205 TULP4Q9NRJ4 1543 aa11.5□□□□□ -0.57
PPARGC1A-211ENST00000513205 PDE3BQ13370 1112 aa11.5□□□□□ -0.57
PPARGC1A-211ENST00000513205 NGEFQ8N5V2 710 aa11.5□□□□□ -0.57
PPARGC1A-211ENST00000513205 BLMP54132 1417 aaPredicted RBP11.5□□□□□ -0.57
PPARGC1A-211ENST00000513205 SMG6Q86US8 1419 aaKnown RBP11.5□□□□□ -0.57
PPARGC1A-211ENST00000513205 ERBB3P21860 1342 aa11.49□□□□□ -0.57
PPARGC1A-211ENST00000513205 SETD1AO15047 1707 aaKnown RBP11.49□□□□□ -0.57
PPARGC1A-211ENST00000513205 FAM135BQ49AJ0 1406 aa11.49□□□□□ -0.57
PPARGC1A-211ENST00000513205 UBR1Q8IWV7 1749 aa11.49□□□□□ -0.57
PPARGC1A-211ENST00000513205 TMEM2Q9UHN6 1383 aa11.48□□□□□ -0.57
PPARGC1A-211ENST00000513205 FER1L4A9Z1Z3 1794 aa11.47□□□□□ -0.57
PPARGC1A-211ENST00000513205 MLECQ14165 292 aa11.47□□□□□ -0.57
PPARGC1A-211ENST00000513205 TMEM92Q6UXU6 159 aa11.47□□□□□ -0.57
PPARGC1A-211ENST00000513205 MICALL2Q8IY33 904 aa11.47□□□□□ -0.57
PPARGC1A-211ENST00000513205 SUPT16HQ9Y5B9 1047 aaKnown RBP11.47□□□□□ -0.57
PPARGC1A-211ENST00000513205 MED14O60244 1454 aa11.47□□□□□ -0.57
PPARGC1A-211ENST00000513205 CGNL1Q0VF96 1302 aa11.47□□□□□ -0.57
PPARGC1A-211ENST00000513205 SLIT1O75093 1534 aa11.47□□□□□ -0.57
PPARGC1A-211ENST00000513205 CPS1P31327 1500 aa11.47□□□□□ -0.57
PPARGC1A-211ENST00000513205 DIP2AQ14689 1571 aa11.47□□□□□ -0.57
PPARGC1A-211ENST00000513205 RIMBP2O15034 1052 aa11.46□□□□□ -0.57
PPARGC1A-211ENST00000513205 SOX12O15370 315 aa11.46□□□□□ -0.57
PPARGC1A-211ENST00000513205 CC2D1BQ5T0F9 858 aaKnown RBP11.46□□□□□ -0.57
PPARGC1A-211ENST00000513205 TMEM132EQ6IEE7 984 aa11.46□□□□□ -0.57
PPARGC1A-211ENST00000513205 PLEKHG1Q9ULL1 1385 aa11.46□□□□□ -0.58
PPARGC1A-211ENST00000513205 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.58
PPARGC1A-211ENST00000513205 PPP2R1AP30153 589 aa11.45□□□□□ -0.58
PPARGC1A-211ENST00000513205 POLR3AO14802 1390 aaPredicted RBP11.45□□□□□ -0.58
PPARGC1A-211ENST00000513205 C3P01024 1663 aa11.45□□□□□ -0.58
PPARGC1A-211ENST00000513205 ARHGAP23Q9P227 1491 aa11.45□□□□□ -0.58
PPARGC1A-211ENST00000513205 TERF2IPQ9NYB0 399 aa11.44□□□□□ -0.58
PPARGC1A-211ENST00000513205 POGKQ9P215 609 aa11.44□□□□□ -0.58
PPARGC1A-211ENST00000513205 NSD3Q9BZ95 1437 aa11.44□□□□□ -0.58
PPARGC1A-211ENST00000513205 ATP7BP35670 1465 aa11.44□□□□□ -0.58
PPARGC1A-211ENST00000513205 NUDCQ9Y266 331 aa11.43□□□□□ -0.58
PPARGC1A-211ENST00000513205 WDR43Q15061 677 aaKnown RBP eCLIP11.43□□□□□ -0.58
PPARGC1A-211ENST00000513205 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
PPARGC1A-211ENST00000513205 ADGRB2O60241 1585 aa11.42□□□□□ -0.58
PPARGC1A-211ENST00000513205 RIOK3O14730 519 aaKnown RBP11.42□□□□□ -0.58
PPARGC1A-211ENST00000513205 VARS2Q5ST30 1063 aaKnown RBP11.42□□□□□ -0.58
PPARGC1A-211ENST00000513205 MS4A4AQ96JQ5 239 aa11.42□□□□□ -0.58
PPARGC1A-211ENST00000513205 PRAM1Q96QH2 718 aa11.42□□□□□ -0.58
PPARGC1A-211ENST00000513205 EID1Q9Y6B2 187 aa11.42□□□□□ -0.58
PPARGC1A-211ENST00000513205 RNF25Q96BH1 459 aaPredicted RBP11.41□□□□□ -0.58
PPARGC1A-211ENST00000513205 PIK3R4Q99570 1358 aa11.4□□□□□ -0.58
PPARGC1A-211ENST00000513205 SRPK2P78362 688 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms