RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 E9PSI1 815 aa12.18□□□□□ -0.46
RFC1-214ENST00000512726 PIK3CDO00329 1044 aa12.18□□□□□ -0.46
RFC1-214ENST00000512726 BLOC1S3Q6QNY0 202 aa12.18□□□□□ -0.46
RFC1-214ENST00000512726 USP17L2Q6R6M4 530 aa12.18□□□□□ -0.46
RFC1-214ENST00000512726 RNF19BQ6ZMZ0 732 aa12.18□□□□□ -0.46
RFC1-214ENST00000512726 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
RFC1-214ENST00000512726 PLEKHM2Q8IWE5 1019 aa12.18□□□□□ -0.46
RFC1-214ENST00000512726 ZNF428Q96B54 188 aa12.18□□□□□ -0.46
RFC1-214ENST00000512726 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.18□□□□□ -0.46
RFC1-214ENST00000512726 F12P00748 615 aaPredicted RBP12.17□□□□□ -0.46
RFC1-214ENST00000512726 BRICD5Q6PL45 260 aa12.17□□□□□ -0.46
RFC1-214ENST00000512726 NOVA2Q9UNW9 492 aaKnown RBP12.17□□□□□ -0.46
RFC1-214ENST00000512726 USP17L5A8MUK1 530 aa12.16□□□□□ -0.46
RFC1-214ENST00000512726 PTPRNQ16849 979 aa12.16□□□□□ -0.46
RFC1-214ENST00000512726 TMEM164Q5U3C3 297 aa12.16□□□□□ -0.46
RFC1-214ENST00000512726 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
RFC1-214ENST00000512726 ZMIZ1Q9ULJ6 1067 aa12.16□□□□□ -0.46
RFC1-214ENST00000512726 TK2O00142 265 aa12.15□□□□□ -0.46
RFC1-214ENST00000512726 FMNL1O95466 1100 aaPredicted RBP12.15□□□□□ -0.46
RFC1-214ENST00000512726 JUNDP17535 347 aa12.14□□□□□ -0.47
RFC1-214ENST00000512726 STK32AQ8WU08 396 aa12.14□□□□□ -0.47
RFC1-214ENST00000512726 MAP10Q9P2G4 905 aa12.14□□□□□ -0.47
RFC1-214ENST00000512726 FAM196BA6NMK8 535 aa12.13□□□□□ -0.47
RFC1-214ENST00000512726 NR1I2O75469 434 aa12.13□□□□□ -0.47
RFC1-214ENST00000512726 CTHP32929 405 aa12.13□□□□□ -0.47
RFC1-214ENST00000512726 MCCD1P59942 119 aaPredicted RBP12.13□□□□□ -0.47
RFC1-214ENST00000512726 ZNF687Q8N1G0 1237 aa12.13□□□□□ -0.47
RFC1-214ENST00000512726 GPSM3Q9Y4H4 160 aa12.13□□□□□ -0.47
RFC1-214ENST00000512726 SLFNL1Q499Z3 407 aa12.12□□□□□ -0.47
RFC1-214ENST00000512726 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
RFC1-214ENST00000512726 ARMC2Q8NEN0 867 aa12.12□□□□□ -0.47
RFC1-214ENST00000512726 PPP4CP60510 307 aa12.11□□□□□ -0.47
RFC1-214ENST00000512726 PTK2Q05397 1052 aa12.11□□□□□ -0.47
RFC1-214ENST00000512726 SCUBE3Q8IX30 993 aa12.11□□□□□ -0.47
RFC1-214ENST00000512726 MKRN1Q9UHC7 482 aaKnown RBP12.11□□□□□ -0.47
RFC1-214ENST00000512726 USP17L15C9J2P7 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 USP17L10C9JJH3 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 USP17L13C9JLJ4 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 USP17L12C9JPN9 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 USP17L11C9JVI0 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 USP17L21D6R901 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 USP17L18D6R9N7 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 USP17L22D6RA61 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 USP17L17D6RBQ6 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 USP17L19D6RCP7 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 USP17L20D6RJB6 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 LZTS3O60299 673 aaPredicted RBP12.1□□□□□ -0.47
RFC1-214ENST00000512726 USP17L24Q0WX57 530 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 DEPDC4Q8N2C3 294 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 FAM174AQ8TBP5 190 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 GPKOWQ92917 476 aaPredicted RBP eCLIP12.1□□□□□ -0.47
RFC1-214ENST00000512726 CEP126Q9P2H0 1117 aa12.1□□□□□ -0.47
RFC1-214ENST00000512726 ATP5J2-PTCD1G3V325 749 aa12.09□□□□□ -0.47
RFC1-214ENST00000512726 EMP3P54852 163 aa12.09□□□□□ -0.47
RFC1-214ENST00000512726 THAP11Q96EK4 314 aa12.09□□□□□ -0.47
RFC1-214ENST00000512726 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
RFC1-214ENST00000512726 PCDHB3Q9Y5E6 796 aa12.09□□□□□ -0.47
RFC1-214ENST00000512726 RASA1P20936 1047 aa12.08□□□□□ -0.48
RFC1-214ENST00000512726 PDXDC2PQ6P474 469 aa12.08□□□□□ -0.48
RFC1-214ENST00000512726 TXNDC2Q86VQ3 553 aa12.08□□□□□ -0.48
RFC1-214ENST00000512726 RNF135Q8IUD6 432 aa12.08□□□□□ -0.48
RFC1-214ENST00000512726 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
RFC1-214ENST00000512726 FAM200AQ8TCP9 573 aa12.08□□□□□ -0.48
RFC1-214ENST00000512726 ARID4AP29374 1257 aaPredicted RBP12.07□□□□□ -0.48
RFC1-214ENST00000512726 CDCA7Q9BWT1 371 aaPredicted RBP12.07□□□□□ -0.48
RFC1-214ENST00000512726 PCDHB9Q9Y5E1 797 aa12.07□□□□□ -0.48
RFC1-214ENST00000512726 GOLGA8CPA6NN73 597 aa12.06□□□□□ -0.48
RFC1-214ENST00000512726 CCNYL3P0C7X3 344 aa12.06□□□□□ -0.48
RFC1-214ENST00000512726 APLP1P51693 650 aa12.06□□□□□ -0.48
RFC1-214ENST00000512726 NCOA4Q13772 614 aa12.06□□□□□ -0.48
RFC1-214ENST00000512726 CRTC2Q53ET0 693 aaPredicted RBP12.06□□□□□ -0.48
RFC1-214ENST00000512726 NBPF14Q5TI25 921 aa12.06□□□□□ -0.48
RFC1-214ENST00000512726 SSFA2P28290 1259 aa12.05□□□□□ -0.48
RFC1-214ENST00000512726 PTK7Q13308 1070 aa12.05□□□□□ -0.48
RFC1-214ENST00000512726 PHLDB3Q6NSJ2 640 aa12.05□□□□□ -0.48
RFC1-214ENST00000512726 PLPP7Q8NBV4 271 aa12.05□□□□□ -0.48
RFC1-214ENST00000512726 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
RFC1-214ENST00000512726 EVA1BQ9NVM1 165 aa12.05□□□□□ -0.48
RFC1-214ENST00000512726 HPS5Q9UPZ3 1129 aa12.05□□□□□ -0.48
RFC1-214ENST00000512726 MSS51Q4VC12 460 aa12.04□□□□□ -0.48
RFC1-214ENST00000512726 CLP1Q92989 425 aaKnown RBP12.04□□□□□ -0.48
RFC1-214ENST00000512726 SOWAHBA6NEL2 793 aa12.03□□□□□ -0.48
RFC1-214ENST00000512726 KCNH2Q12809 1159 aa12.03□□□□□ -0.48
RFC1-214ENST00000512726 EML3Q32P44 896 aa12.03□□□□□ -0.48
RFC1-214ENST00000512726 MAP7D1Q3KQU3 841 aa12.03□□□□□ -0.48
RFC1-214ENST00000512726 ADGRD1Q6QNK2 874 aa12.03□□□□□ -0.48
RFC1-214ENST00000512726 PHTF2Q8N3S3 785 aa12.03□□□□□ -0.48
RFC1-214ENST00000512726 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
RFC1-214ENST00000512726 TSR3Q9UJK0 312 aaKnown RBP12.03□□□□□ -0.48
RFC1-214ENST00000512726 ANKMY2Q8IV38 441 aa12.02□□□□□ -0.49
RFC1-214ENST00000512726 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
RFC1-214ENST00000512726 DXOO77932 396 aaKnown RBP12.01□□□□□ -0.49
RFC1-214ENST00000512726 TRIM50Q86XT4 487 aa12.01□□□□□ -0.49
RFC1-214ENST00000512726 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
RFC1-214ENST00000512726 ST18O60284 1047 aa11.99□□□□□ -0.49
RFC1-214ENST00000512726 ERCC3P19447 782 aa11.99□□□□□ -0.49
RFC1-214ENST00000512726 ATP2B4P23634 1241 aa11.99□□□□□ -0.49
RFC1-214ENST00000512726 ATP1A2P50993 1020 aa11.99□□□□□ -0.49
RFC1-214ENST00000512726 FAM69CQ0P6D2 419 aa11.99□□□□□ -0.49
RFC1-214ENST00000512726 OGFOD1Q8N543 542 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms