RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 TRAK1Q9UPV9 953 aa17.72■□□□□ 0.43
DEPDC1B-206ENST00000512452 KNSTRNQ9Y448 316 aa17.72■□□□□ 0.43
DEPDC1B-206ENST00000512452 HDGFP51858 240 aaKnown RBP17.71■□□□□ 0.43
DEPDC1B-206ENST00000512452 FAM9BQ8IZU0 186 aa17.71■□□□□ 0.43
DEPDC1B-206ENST00000512452 GLI3P10071 1580 aa17.7■□□□□ 0.42
DEPDC1B-206ENST00000512452 DLC1Q96QB1 1528 aa17.7■□□□□ 0.42
DEPDC1B-206ENST00000512452 TMEM132EQ6IEE7 984 aa17.69■□□□□ 0.42
DEPDC1B-206ENST00000512452 EVC2Q86UK5 1308 aa17.69■□□□□ 0.42
DEPDC1B-206ENST00000512452 AMER1Q5JTC6 1135 aaPredicted RBP17.68■□□□□ 0.42
DEPDC1B-206ENST00000512452 UNC5CLQ8IV45 518 aa17.68■□□□□ 0.42
DEPDC1B-206ENST00000512452 YTHDC2Q9H6S0 1430 aaKnown RBP17.68■□□□□ 0.42
DEPDC1B-206ENST00000512452 CAMTA1Q9Y6Y1 1673 aa17.67■□□□□ 0.42
DEPDC1B-206ENST00000512452 GIGYF1O75420 1035 aaPredicted RBP17.66■□□□□ 0.42
DEPDC1B-206ENST00000512452 AMOTL2Q9Y2J4 779 aa17.66■□□□□ 0.42
DEPDC1B-206ENST00000512452 SOS2Q07890 1332 aaPredicted RBP17.66■□□□□ 0.42
DEPDC1B-206ENST00000512452 SPON1Q9HCB6 807 aa17.65■□□□□ 0.42
DEPDC1B-206ENST00000512452 USP32Q8NFA0 1604 aa17.65■□□□□ 0.42
DEPDC1B-206ENST00000512452 TULP4Q9NRJ4 1543 aa17.64■□□□□ 0.41
DEPDC1B-206ENST00000512452 SLC34A2O95436 690 aa17.64■□□□□ 0.41
DEPDC1B-206ENST00000512452 EZH2Q15910 746 aaKnown RBP17.64■□□□□ 0.41
DEPDC1B-206ENST00000512452 PIK3R4Q99570 1358 aa17.64■□□□□ 0.41
DEPDC1B-206ENST00000512452 CC2D1BQ5T0F9 858 aaKnown RBP17.63■□□□□ 0.41
DEPDC1B-206ENST00000512452 ABCC11Q96J66 1382 aa17.62■□□□□ 0.41
DEPDC1B-206ENST00000512452 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.61■□□□□ 0.41
DEPDC1B-206ENST00000512452 ONECUT3O60422 494 aaPredicted RBP17.61■□□□□ 0.41
DEPDC1B-206ENST00000512452 KCNQ2O43526 872 aa17.6■□□□□ 0.41
DEPDC1B-206ENST00000512452 SIRT1Q96EB6 747 aa17.6■□□□□ 0.41
DEPDC1B-206ENST00000512452 NRXN3Q9Y4C0 1643 aa17.6■□□□□ 0.41
DEPDC1B-206ENST00000512452 KNDC1Q76NI1 1749 aa17.59■□□□□ 0.41
DEPDC1B-206ENST00000512452 COL22A1Q8NFW1 1626 aaPredicted RBP17.59■□□□□ 0.41
DEPDC1B-206ENST00000512452 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
DEPDC1B-206ENST00000512452 TECPR2O15040 1411 aa17.58■□□□□ 0.41
DEPDC1B-206ENST00000512452 ADAMTS13Q76LX8 1427 aa17.58■□□□□ 0.41
DEPDC1B-206ENST00000512452 NSD2O96028 1365 aa17.58■□□□□ 0.4
DEPDC1B-206ENST00000512452 ANKRD36BQ8N2N9 1353 aa17.58■□□□□ 0.4
DEPDC1B-206ENST00000512452 PPP2R1AP30153 589 aa17.58■□□□□ 0.4
DEPDC1B-206ENST00000512452 MARF1Q9Y4F3 1742 aaKnown RBP17.58■□□□□ 0.4
DEPDC1B-206ENST00000512452 NEFLP07196 543 aa17.57■□□□□ 0.4
DEPDC1B-206ENST00000512452 CEP350Q5VT06 3117 aa17.57■□□□□ 0.4
DEPDC1B-206ENST00000512452 DISP2A7MBM2 1401 aa17.56■□□□□ 0.4
DEPDC1B-206ENST00000512452 CARD14Q9BXL6 1004 aa17.56■□□□□ 0.4
DEPDC1B-206ENST00000512452 POGKQ9P215 609 aa17.56■□□□□ 0.4
DEPDC1B-206ENST00000512452 SMG6Q86US8 1419 aaKnown RBP17.55■□□□□ 0.4
DEPDC1B-206ENST00000512452 PTPRUQ92729 1446 aa17.55■□□□□ 0.4
DEPDC1B-206ENST00000512452 RGPD1P0DJD0 1748 aa17.55■□□□□ 0.4
DEPDC1B-206ENST00000512452 CHD4Q14839 1912 aa17.55■□□□□ 0.4
DEPDC1B-206ENST00000512452 PRAM1Q96QH2 718 aa17.55■□□□□ 0.4
DEPDC1B-206ENST00000512452 CAMKK2Q96RR4 588 aa17.55■□□□□ 0.4
DEPDC1B-206ENST00000512452 STK26Q9P289 416 aa17.55■□□□□ 0.4
DEPDC1B-206ENST00000512452 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
DEPDC1B-206ENST00000512452 SLIT2O94813 1529 aa17.55■□□□□ 0.4
DEPDC1B-206ENST00000512452 NSD3Q9BZ95 1437 aa17.55■□□□□ 0.4
DEPDC1B-206ENST00000512452 A0A0G2JS52 829 aa17.54■□□□□ 0.4
DEPDC1B-206ENST00000512452 MYT1Q01538 1121 aa17.54■□□□□ 0.4
DEPDC1B-206ENST00000512452 VPS72Q15906 364 aa17.54■□□□□ 0.4
DEPDC1B-206ENST00000512452 CCDC9Q9Y3X0 531 aaKnown RBP17.54■□□□□ 0.4
DEPDC1B-206ENST00000512452 CGNL1Q0VF96 1302 aa17.53■□□□□ 0.4
DEPDC1B-206ENST00000512452 C1orf167Q5SNV9 1468 aa17.53■□□□□ 0.4
DEPDC1B-206ENST00000512452 CAPN15O75808 1086 aa17.53■□□□□ 0.4
DEPDC1B-206ENST00000512452 ORAI2Q96SN7 254 aa17.53■□□□□ 0.4
DEPDC1B-206ENST00000512452 NBPF14Q5TI25 921 aa17.52■□□□□ 0.4
DEPDC1B-206ENST00000512452 SLC12A5Q9H2X9 1139 aa17.52■□□□□ 0.4
DEPDC1B-206ENST00000512452 PDE3BQ13370 1112 aa17.51■□□□□ 0.39
DEPDC1B-206ENST00000512452 ADGRL3Q9HAR2 1447 aa17.5■□□□□ 0.39
DEPDC1B-206ENST00000512452 ERICH6BQ5W0A0 696 aa17.5■□□□□ 0.39
DEPDC1B-206ENST00000512452 PCDH10Q9P2E7 1040 aa17.5■□□□□ 0.39
DEPDC1B-206ENST00000512452 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
DEPDC1B-206ENST00000512452 FAM182BQ5T319 152 aa17.49■□□□□ 0.39
DEPDC1B-206ENST00000512452 TERF2IPQ9NYB0 399 aa17.49■□□□□ 0.39
DEPDC1B-206ENST00000512452 POLR3AO14802 1390 aaPredicted RBP17.49■□□□□ 0.39
DEPDC1B-206ENST00000512452 METP08581 1390 aa17.49■□□□□ 0.39
DEPDC1B-206ENST00000512452 CABP2Q9NPB3 220 aa17.48■□□□□ 0.39
DEPDC1B-206ENST00000512452 NUDCQ9Y266 331 aa17.48■□□□□ 0.39
DEPDC1B-206ENST00000512452 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
DEPDC1B-206ENST00000512452 WDR43Q15061 677 aaKnown RBP eCLIP17.47■□□□□ 0.39
DEPDC1B-206ENST00000512452 ATP7BP35670 1465 aa17.47■□□□□ 0.39
DEPDC1B-206ENST00000512452 CDK19Q9BWU1 502 aa17.46■□□□□ 0.39
DEPDC1B-206ENST00000512452 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
DEPDC1B-206ENST00000512452 SAFB2Q14151 953 aaKnown RBP eCLIP17.45■□□□□ 0.38
DEPDC1B-206ENST00000512452 MORC1Q86VD1 984 aa17.45■□□□□ 0.38
DEPDC1B-206ENST00000512452 FKBP8Q14318 412 aa17.44■□□□□ 0.38
DEPDC1B-206ENST00000512452 HDGFL2Q7Z4V5 671 aaPredicted RBP17.44■□□□□ 0.38
DEPDC1B-206ENST00000512452 NGEFQ8N5V2 710 aa17.44■□□□□ 0.38
DEPDC1B-206ENST00000512452 ADGRB2O60241 1585 aa17.44■□□□□ 0.38
DEPDC1B-206ENST00000512452 TNS1Q9HBL0 1735 aaKnown RBP17.44■□□□□ 0.38
DEPDC1B-206ENST00000512452 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
DEPDC1B-206ENST00000512452 APBA3O96018 575 aa17.43■□□□□ 0.38
DEPDC1B-206ENST00000512452 FAM98CQ17RN3 349 aaKnown RBP17.43■□□□□ 0.38
DEPDC1B-206ENST00000512452 ANKRD26Q9UPS8 1709 aa17.42■□□□□ 0.38
DEPDC1B-206ENST00000512452 PELP1Q8IZL8 1130 aaKnown RBP17.42■□□□□ 0.38
DEPDC1B-206ENST00000512452 PLEKHH1Q9ULM0 1364 aa17.41■□□□□ 0.38
DEPDC1B-206ENST00000512452 WASLO00401 505 aaPredicted RBP17.41■□□□□ 0.38
DEPDC1B-206ENST00000512452 TRIM37O94972 964 aa17.41■□□□□ 0.38
DEPDC1B-206ENST00000512452 HSPA6P17066 643 aa17.41■□□□□ 0.38
DEPDC1B-206ENST00000512452 PRELPP51888 382 aa17.41■□□□□ 0.38
DEPDC1B-206ENST00000512452 ADAMTS8Q9UP79 889 aa17.41■□□□□ 0.38
DEPDC1B-206ENST00000512452 XRN1Q8IZH2 1706 aaKnown RBP17.41■□□□□ 0.38
DEPDC1B-206ENST00000512452 FAM83GA6ND36 823 aa17.4■□□□□ 0.38
DEPDC1B-206ENST00000512452 NPHP3Q7Z494 1330 aa17.4■□□□□ 0.38
DEPDC1B-206ENST00000512452 WAPLQ7Z5K2 1190 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms