RNA–Protein interactions for RNA: ENST00000512380.1

PDLIM3-208, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-208ENST00000512380 CLK2P49760 499 aaKnown RBP10.89□□□□□ -0.67
PDLIM3-208ENST00000512380 GUCA2AQ02747 115 aa10.89□□□□□ -0.67
PDLIM3-208ENST00000512380 PATL2C9JE40 543 aaKnown RBP10.88□□□□□ -0.67
PDLIM3-208ENST00000512380 E9PSI1 815 aa10.88□□□□□ -0.67
PDLIM3-208ENST00000512380 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
PDLIM3-208ENST00000512380 GDPD2Q9HCC8 539 aa10.88□□□□□ -0.67
PDLIM3-208ENST00000512380 WWC1Q8IX03 1113 aa10.87□□□□□ -0.67
PDLIM3-208ENST00000512380 SPIRE2Q8WWL2 714 aa10.86□□□□□ -0.67
PDLIM3-208ENST00000512380 FDX1P10109 184 aa10.85□□□□□ -0.67
PDLIM3-208ENST00000512380 TMEM259Q4ZIN3 620 aa10.84□□□□□ -0.67
PDLIM3-208ENST00000512380 RETREG3Q86VR2 466 aa10.84□□□□□ -0.67
PDLIM3-208ENST00000512380 GLMNQ92990 594 aa10.84□□□□□ -0.67
PDLIM3-208ENST00000512380 PKD2L1Q9P0L9 805 aa10.84□□□□□ -0.67
PDLIM3-208ENST00000512380 PCDHGC3Q9UN70 934 aa10.84□□□□□ -0.67
PDLIM3-208ENST00000512380 TNFRSF10AO00220 468 aa10.83□□□□□ -0.68
PDLIM3-208ENST00000512380 CD2BP2O95400 341 aaKnown RBP10.83□□□□□ -0.68
PDLIM3-208ENST00000512380 ABL2P42684 1182 aa10.83□□□□□ -0.68
PDLIM3-208ENST00000512380 POM121CA8CG34 1229 aa10.82□□□□□ -0.68
PDLIM3-208ENST00000512380 KCNA1Q09470 495 aa10.82□□□□□ -0.68
PDLIM3-208ENST00000512380 FBXO31Q5XUX0 539 aaPredicted RBP10.82□□□□□ -0.68
PDLIM3-208ENST00000512380 MOXD2PA6NHM9 499 aa10.81□□□□□ -0.68
PDLIM3-208ENST00000512380 ZBTB24O43167 697 aaPredicted RBP10.81□□□□□ -0.68
PDLIM3-208ENST00000512380 JUNDP17535 347 aa10.81□□□□□ -0.68
PDLIM3-208ENST00000512380 MTMR14Q8NCE2 650 aa10.81□□□□□ -0.68
PDLIM3-208ENST00000512380 SYMPKQ92797 1274 aaKnown RBP10.81□□□□□ -0.68
PDLIM3-208ENST00000512380 TBC1D2Q9BYX2 928 aa10.81□□□□□ -0.68
PDLIM3-208ENST00000512380 DGAT1O75907 488 aa10.8□□□□□ -0.68
PDLIM3-208ENST00000512380 BRD1O95696 1058 aa10.8□□□□□ -0.68
PDLIM3-208ENST00000512380 PKDCCQ504Y2 493 aa10.8□□□□□ -0.68
PDLIM3-208ENST00000512380 GJA5P36382 358 aa10.79□□□□□ -0.68
PDLIM3-208ENST00000512380 TRIM32Q13049 653 aa10.79□□□□□ -0.68
PDLIM3-208ENST00000512380 DIXDC1Q155Q3 683 aa10.79□□□□□ -0.68
PDLIM3-208ENST00000512380 PBXIP1Q96AQ6 731 aa10.79□□□□□ -0.68
PDLIM3-208ENST00000512380 C6orf229H3BNL8 230 aa10.78□□□□□ -0.68
PDLIM3-208ENST00000512380 NDUFV2P19404 249 aa10.78□□□□□ -0.68
PDLIM3-208ENST00000512380 FOXC1Q12948 553 aa10.78□□□□□ -0.68
PDLIM3-208ENST00000512380 LIMD1Q9UGP4 676 aa10.78□□□□□ -0.68
PDLIM3-208ENST00000512380 PPP2R2DQ66LE6 453 aa10.77□□□□□ -0.69
PDLIM3-208ENST00000512380 PRM3Q9NNZ6 103 aa10.77□□□□□ -0.69
PDLIM3-208ENST00000512380 FAM187AA6NFU0 413 aa10.76□□□□□ -0.69
PDLIM3-208ENST00000512380 CSB-PGBD3P0DP91 1061 aa10.76□□□□□ -0.69
PDLIM3-208ENST00000512380 RFX1P22670 979 aa10.76□□□□□ -0.69
PDLIM3-208ENST00000512380 TOR4AQ9NXH8 423 aa10.76□□□□□ -0.69
PDLIM3-208ENST00000512380 TBC1D2BQ9UPU7 963 aa10.76□□□□□ -0.69
PDLIM3-208ENST00000512380 USTQ9Y2C2 406 aa10.76□□□□□ -0.69
PDLIM3-208ENST00000512380 MYT1Q01538 1121 aa10.75□□□□□ -0.69
PDLIM3-208ENST00000512380 RSBN1LQ6PCB5 846 aaPredicted RBP10.75□□□□□ -0.69
PDLIM3-208ENST00000512380 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.74□□□□□ -0.69
PDLIM3-208ENST00000512380 WNT7AO00755 349 aa10.74□□□□□ -0.69
PDLIM3-208ENST00000512380 MTMR2Q13614 643 aa10.74□□□□□ -0.69
PDLIM3-208ENST00000512380 CCDC27Q2M243 656 aa10.74□□□□□ -0.69
PDLIM3-208ENST00000512380 CCDC24Q8N4L8 307 aa10.74□□□□□ -0.69
PDLIM3-208ENST00000512380 NUDT12Q9BQG2 462 aa10.74□□□□□ -0.69
PDLIM3-208ENST00000512380 SPTLC1O15269 473 aa10.72□□□□□ -0.69
PDLIM3-208ENST00000512380 RIC3Q7Z5B4 369 aa10.72□□□□□ -0.69
PDLIM3-208ENST00000512380 CARNS1A5YM72 827 aa10.71□□□□□ -0.69
PDLIM3-208ENST00000512380 WNT7BP56706 349 aa10.71□□□□□ -0.69
PDLIM3-208ENST00000512380 PTPRNQ16849 979 aa10.71□□□□□ -0.69
PDLIM3-208ENST00000512380 DESI1Q6ICB0 168 aa10.71□□□□□ -0.69
PDLIM3-208ENST00000512380 CYP4X1Q8N118 509 aa10.71□□□□□ -0.69
PDLIM3-208ENST00000512380 PRR7Q8TB68 274 aa10.71□□□□□ -0.69
PDLIM3-208ENST00000512380 IVNS1ABPQ9Y6Y0 642 aa10.71□□□□□ -0.69
PDLIM3-208ENST00000512380 CCNYL3P0C7X3 344 aa10.7□□□□□ -0.7
PDLIM3-208ENST00000512380 HDGFL1Q5TGJ6 251 aa10.7□□□□□ -0.7
PDLIM3-208ENST00000512380 AMOTL2Q9Y2J4 779 aa10.7□□□□□ -0.7
PDLIM3-208ENST00000512380 CCDC180Q9P1Z9 1646 aa10.69□□□□□ -0.7
PDLIM3-208ENST00000512380 AVPP01185 164 aa10.69□□□□□ -0.7
PDLIM3-208ENST00000512380 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
PDLIM3-208ENST00000512380 AP1G2O75843 785 aa10.68□□□□□ -0.7
PDLIM3-208ENST00000512380 SKOR1P84550 965 aa10.68□□□□□ -0.7
PDLIM3-208ENST00000512380 CRIPAKQ8N1N5 446 aa10.68□□□□□ -0.7
PDLIM3-208ENST00000512380 SOCS7O14512 581 aa10.67□□□□□ -0.7
PDLIM3-208ENST00000512380 CFAP70Q5T0N1 1121 aa10.67□□□□□ -0.7
PDLIM3-208ENST00000512380 PRPF38BQ5VTL8 546 aaKnown RBP10.67□□□□□ -0.7
PDLIM3-208ENST00000512380 PTCRAQ6ISU1 281 aaPredicted RBP10.67□□□□□ -0.7
PDLIM3-208ENST00000512380 MRGPRX2Q96LB1 330 aa10.67□□□□□ -0.7
PDLIM3-208ENST00000512380 ZBTB3Q9H5J0 574 aa10.67□□□□□ -0.7
PDLIM3-208ENST00000512380 PCDHB15Q9Y5E8 787 aa10.67□□□□□ -0.7
PDLIM3-208ENST00000512380 SND1Q7KZF4 910 aaKnown RBP eCLIP10.66□□□□□ -0.7
PDLIM3-208ENST00000512380 SNIP1Q8TAD8 396 aaKnown RBP10.66□□□□□ -0.7
PDLIM3-208ENST00000512380 ADAMTS19Q8TE59 1207 aa10.66□□□□□ -0.7
PDLIM3-208ENST00000512380 USP35Q9P2H5 1018 aa10.66□□□□□ -0.7
PDLIM3-208ENST00000512380 TTC24A2A3L6 582 aaPredicted RBP10.65□□□□□ -0.7
PDLIM3-208ENST00000512380 TUSC1Q2TAM9 212 aa10.65□□□□□ -0.7
PDLIM3-208ENST00000512380 RC3H1Q5TC82 1133 aaKnown RBP10.65□□□□□ -0.7
PDLIM3-208ENST00000512380 AAASQ9NRG9 546 aa10.65□□□□□ -0.7
PDLIM3-208ENST00000512380 CFAP99D6REC4 459 aa10.64□□□□□ -0.71
PDLIM3-208ENST00000512380 ST8SIA5O15466 376 aa10.64□□□□□ -0.71
PDLIM3-208ENST00000512380 SRPK2P78362 688 aaKnown RBP10.64□□□□□ -0.71
PDLIM3-208ENST00000512380 EVA1BQ9NVM1 165 aa10.64□□□□□ -0.71
PDLIM3-208ENST00000512380 CTC1Q2NKJ3 1217 aa10.63□□□□□ -0.71
PDLIM3-208ENST00000512380 ZNF787Q6DD87 383 aa10.63□□□□□ -0.71
PDLIM3-208ENST00000512380 UNC93B1Q9H1C4 597 aa10.63□□□□□ -0.71
PDLIM3-208ENST00000512380 USP17L8P0C7I0 530 aa10.62□□□□□ -0.71
PDLIM3-208ENST00000512380 SMPD1P17405 629 aa10.62□□□□□ -0.71
PDLIM3-208ENST00000512380 KCNH2Q12809 1159 aa10.62□□□□□ -0.71
PDLIM3-208ENST00000512380 PPP1R12CQ9BZL4 782 aa10.62□□□□□ -0.71
PDLIM3-208ENST00000512380 VRTNQ9H8Y1 702 aa10.62□□□□□ -0.71
PDLIM3-208ENST00000512380 SMCPP49901 116 aaPredicted RBP10.61□□□□□ -0.71
PDLIM3-208ENST00000512380 QPCTQ16769 361 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms