RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 C1QTNF8P60827 252 aa15.33■□□□□ 0.04
PDLIM5-217ENST00000512274 TMEM132EQ6IEE7 984 aa15.33■□□□□ 0.04
PDLIM5-217ENST00000512274 CCER1Q8TC90 406 aaPredicted RBP15.33■□□□□ 0.04
PDLIM5-217ENST00000512274 ARHGEF10O15013 1369 aa15.33■□□□□ 0.04
PDLIM5-217ENST00000512274 POTEDQ86YR6 584 aa15.32■□□□□ 0.04
PDLIM5-217ENST00000512274 PMFBP1Q8TBY8 1022 aa15.32■□□□□ 0.04
PDLIM5-217ENST00000512274 RPGRIP1LQ68CZ1 1315 aa15.32■□□□□ 0.04
PDLIM5-217ENST00000512274 SBNO1A3KN83 1393 aa15.32■□□□□ 0.04
PDLIM5-217ENST00000512274 ADGRF5Q8IZF2 1346 aa15.31■□□□□ 0.04
PDLIM5-217ENST00000512274 PARD3Q8TEW0 1356 aa15.31■□□□□ 0.04
PDLIM5-217ENST00000512274 KNDC1Q76NI1 1749 aa15.29■□□□□ 0.04
PDLIM5-217ENST00000512274 NRXN1Q9ULB1 1477 aa15.28■□□□□ 0.04
PDLIM5-217ENST00000512274 USP35Q9P2H5 1018 aa15.28■□□□□ 0.04
PDLIM5-217ENST00000512274 TECPR2O15040 1411 aa15.27■□□□□ 0.04
PDLIM5-217ENST00000512274 SPATA31A1Q5TZJ5 1347 aa15.27■□□□□ 0.04
PDLIM5-217ENST00000512274 SAFB2Q14151 953 aaKnown RBP eCLIP15.27■□□□□ 0.04
PDLIM5-217ENST00000512274 STRN4Q9NRL3 753 aa15.27■□□□□ 0.04
PDLIM5-217ENST00000512274 CHD4Q14839 1912 aa15.27■□□□□ 0.03
PDLIM5-217ENST00000512274 ABCC11Q96J66 1382 aa15.26■□□□□ 0.03
PDLIM5-217ENST00000512274 PDE3BQ13370 1112 aa15.26■□□□□ 0.03
PDLIM5-217ENST00000512274 PRDM11Q9NQV5 511 aa15.26■□□□□ 0.03
PDLIM5-217ENST00000512274 NRKQ7Z2Y5 1582 aa15.26■□□□□ 0.03
PDLIM5-217ENST00000512274 TRPM3Q9HCF6 1732 aaPredicted RBP15.26■□□□□ 0.03
PDLIM5-217ENST00000512274 RGL3Q3MIN7 710 aa15.25■□□□□ 0.03
PDLIM5-217ENST00000512274 CHRNA2Q15822 529 aa15.24■□□□□ 0.03
PDLIM5-217ENST00000512274 PDGFDQ9GZP0 370 aaPredicted RBP15.24■□□□□ 0.03
PDLIM5-217ENST00000512274 MYOM1P52179 1685 aa15.24■□□□□ 0.03
PDLIM5-217ENST00000512274 ALS2Q96Q42 1657 aa15.24■□□□□ 0.03
PDLIM5-217ENST00000512274 YTHDC2Q9H6S0 1430 aaKnown RBP15.23■□□□□ 0.03
PDLIM5-217ENST00000512274 ZBTB7AO95365 584 aa15.22■□□□□ 0.03
PDLIM5-217ENST00000512274 ATF5Q9Y2D1 282 aaPredicted RBP15.22■□□□□ 0.03
PDLIM5-217ENST00000512274 CRYBG1Q9Y4K1 1723 aa15.22■□□□□ 0.03
PDLIM5-217ENST00000512274 PAK3O75914 559 aaPredicted RBP15.21■□□□□ 0.03
PDLIM5-217ENST00000512274 CASZ1Q86V15 1759 aa15.21■□□□□ 0.02
PDLIM5-217ENST00000512274 ANO8Q9HCE9 1232 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-217ENST00000512274 EVA1CP58658 441 aa15.19■□□□□ 0.02
PDLIM5-217ENST00000512274 FHDC1Q9C0D6 1143 aaPredicted RBP15.19■□□□□ 0.02
PDLIM5-217ENST00000512274 GPRASP1Q5JY77 1395 aa15.19■□□□□ 0.02
PDLIM5-217ENST00000512274 ZC3H6P61129 1189 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-217ENST00000512274 SYT17Q9BSW7 474 aa15.18■□□□□ 0.02
PDLIM5-217ENST00000512274 TIMELESSQ9UNS1 1208 aa15.18■□□□□ 0.02
PDLIM5-217ENST00000512274 KIAA0232Q92628 1395 aa15.18■□□□□ 0.02
PDLIM5-217ENST00000512274 PRAM1Q96QH2 718 aa15.17■□□□□ 0.02
PDLIM5-217ENST00000512274 GIGYF1O75420 1035 aaPredicted RBP15.16■□□□□ 0.02
PDLIM5-217ENST00000512274 PTGER2P43116 358 aa15.16■□□□□ 0.02
PDLIM5-217ENST00000512274 BARGINQ6ZT62 677 aa15.16■□□□□ 0.02
PDLIM5-217ENST00000512274 SIRT1Q96EB6 747 aa15.16■□□□□ 0.02
PDLIM5-217ENST00000512274 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
PDLIM5-217ENST00000512274 NUTM2GQ5VZR2 741 aa15.15■□□□□ 0.02
PDLIM5-217ENST00000512274 HIRIP3Q9BW71 556 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-217ENST00000512274 BCL11BQ9C0K0 894 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-217ENST00000512274 LARP1Q6PKG0 1096 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-217ENST00000512274 NGDNQ8NEJ9 315 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-217ENST00000512274 POGKQ9P215 609 aa15.14■□□□□ 0.01
PDLIM5-217ENST00000512274 SBF2Q86WG5 1849 aa15.13■□□□□ 0.01
PDLIM5-217ENST00000512274 PIK3C2GO75747 1445 aa15.13■□□□□ 0.01
PDLIM5-217ENST00000512274 SSH2Q76I76 1423 aa15.13■□□□□ 0.01
PDLIM5-217ENST00000512274 ANKARQ7Z5J8 1434 aa15.13■□□□□ 0.01
PDLIM5-217ENST00000512274 PHRF1Q9P1Y6 1649 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-217ENST00000512274 ANKRD30BQ9BXX2 1392 aa15.12■□□□□ 0.01
PDLIM5-217ENST00000512274 PTF1AQ7RTS3 328 aa15.12■□□□□ 0.01
PDLIM5-217ENST00000512274 TCP11L2Q8N4U5 519 aa15.12■□□□□ 0.01
PDLIM5-217ENST00000512274 PRR36Q9H6K5 1346 aa15.12■□□□□ 0.01
PDLIM5-217ENST00000512274 CFAP70Q5T0N1 1121 aa15.11■□□□□ 0.01
PDLIM5-217ENST00000512274 PLSCR1O15162 318 aa15.1■□□□□ 0.01
PDLIM5-217ENST00000512274 GPR162Q16538 588 aa15.1■□□□□ 0.01
PDLIM5-217ENST00000512274 RGPD3A6NKT7 1758 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-217ENST00000512274 RGPD4Q7Z3J3 1758 aa15.1■□□□□ 0.01
PDLIM5-217ENST00000512274 MINK1Q8N4C8 1332 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-217ENST00000512274 DLC1Q96QB1 1528 aa15.09■□□□□ 0.01
PDLIM5-217ENST00000512274 PROM2Q8N271 834 aa15.09■□□□□ 0.01
PDLIM5-217ENST00000512274 C14orf93Q9H972 538 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-217ENST00000512274 PARP4Q9UKK3 1724 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-217ENST00000512274 SPATA31E1Q6ZUB1 1445 aa15.08■□□□□ 0
PDLIM5-217ENST00000512274 PEAK1Q9H792 1746 aa15.07■□□□□ 0
PDLIM5-217ENST00000512274 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
PDLIM5-217ENST00000512274 STK32BQ9NY57 414 aa15.07■□□□□ 0
PDLIM5-217ENST00000512274 MPHOSPH9Q99550 1183 aa15.06■□□□□ 0
PDLIM5-217ENST00000512274 OVOS2A0A0G2JMS6 1433 aa15.06■□□□□ 0
PDLIM5-217ENST00000512274 OVOS2A0A0J9YW53 1432 aa15.06■□□□□ 0
PDLIM5-217ENST00000512274 OVOS2Q6IE36 1432 aa15.06■□□□□ 0
PDLIM5-217ENST00000512274 SLC15A2Q16348 729 aa15.05■□□□□ -0
PDLIM5-217ENST00000512274 KLHL34Q8N239 644 aa15.05■□□□□ -0
PDLIM5-217ENST00000512274 ARXQ96QS3 562 aa15.05■□□□□ -0
PDLIM5-217ENST00000512274 MTFR1LQ9H019 292 aa15.05■□□□□ -0
PDLIM5-217ENST00000512274 TRAK1Q9UPV9 953 aa15.05■□□□□ -0
PDLIM5-217ENST00000512274 THRAP3Q9Y2W1 955 aaKnown RBP15.05■□□□□ -0
PDLIM5-217ENST00000512274 TULP4Q9NRJ4 1543 aa15.04■□□□□ -0
PDLIM5-217ENST00000512274 ZBTB7CA1YPR0 619 aa15.04■□□□□ -0
PDLIM5-217ENST00000512274 C11orf95C9JLR9 678 aaPredicted RBP15.04■□□□□ -0
PDLIM5-217ENST00000512274 SGIP1Q9BQI5 828 aa15.04■□□□□ -0
PDLIM5-217ENST00000512274 TXNRD1Q16881 649 aa15.03■□□□□ -0
PDLIM5-217ENST00000512274 LMO7Q8WWI1 1683 aa15.03■□□□□ -0
PDLIM5-217ENST00000512274 WASLO00401 505 aaPredicted RBP15.02■□□□□ -0
PDLIM5-217ENST00000512274 DDB1Q16531 1140 aa15.02■□□□□ -0
PDLIM5-217ENST00000512274 SHANK3Q9BYB0 1731 aa15.02□□□□□ -0.01
PDLIM5-217ENST00000512274 EIF3AQ14152 1382 aaKnown RBP15.01□□□□□ -0.01
PDLIM5-217ENST00000512274 LRRC37A3O60309 1634 aa15.01□□□□□ -0.01
PDLIM5-217ENST00000512274 ATP7BP35670 1465 aa15□□□□□ -0.01
PDLIM5-217ENST00000512274 ITSN1Q15811 1721 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms