RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 RGS12O14924 1447 aa18.97■□□□□ 0.63
RNF4-215ENST00000511843 POLR3AO14802 1390 aaPredicted RBP18.96■□□□□ 0.63
RNF4-215ENST00000511843 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
RNF4-215ENST00000511843 ATRNO75882 1429 aa18.96■□□□□ 0.63
RNF4-215ENST00000511843 NWD2Q9ULI1 1742 aa18.95■□□□□ 0.62
RNF4-215ENST00000511843 RBM6P78332 1123 aaKnown RBP18.95■□□□□ 0.62
RNF4-215ENST00000511843 CDK12Q9NYV4 1490 aaPredicted RBP18.95■□□□□ 0.62
RNF4-215ENST00000511843 SLIT2O94813 1529 aa18.95■□□□□ 0.62
RNF4-215ENST00000511843 NUTM2GQ5VZR2 741 aa18.94■□□□□ 0.62
RNF4-215ENST00000511843 TRPC5Q9UL62 973 aaPredicted RBP18.94■□□□□ 0.62
RNF4-215ENST00000511843 PLEKHG3A1L390 1219 aa18.93■□□□□ 0.62
RNF4-215ENST00000511843 EVC2Q86UK5 1308 aa18.93■□□□□ 0.62
RNF4-215ENST00000511843 NRAPQ86VF7 1730 aa18.92■□□□□ 0.62
RNF4-215ENST00000511843 AKAP12Q02952 1782 aa18.92■□□□□ 0.62
RNF4-215ENST00000511843 GLI3P10071 1580 aa18.91■□□□□ 0.62
RNF4-215ENST00000511843 CABP1Q9NZU7 370 aa18.91■□□□□ 0.62
RNF4-215ENST00000511843 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
RNF4-215ENST00000511843 FAM83GA6ND36 823 aa18.9■□□□□ 0.62
RNF4-215ENST00000511843 BRWD3Q6RI45 1802 aa18.88■□□□□ 0.61
RNF4-215ENST00000511843 UNC5CLQ8IV45 518 aa18.88■□□□□ 0.61
RNF4-215ENST00000511843 NRKQ7Z2Y5 1582 aa18.88■□□□□ 0.61
RNF4-215ENST00000511843 PIK3C2AO00443 1686 aa18.86■□□□□ 0.61
RNF4-215ENST00000511843 USP6P35125 1406 aa18.86■□□□□ 0.61
RNF4-215ENST00000511843 GJD4Q96KN9 370 aaPredicted RBP18.86■□□□□ 0.61
RNF4-215ENST00000511843 SBNO2Q9Y2G9 1366 aa18.85■□□□□ 0.61
RNF4-215ENST00000511843 ABTB2Q8N961 1025 aa18.85■□□□□ 0.61
RNF4-215ENST00000511843 MON2Q7Z3U7 1717 aa18.85■□□□□ 0.61
RNF4-215ENST00000511843 KIAA0232Q92628 1395 aa18.83■□□□□ 0.61
RNF4-215ENST00000511843 ZC3H6P61129 1189 aaKnown RBP18.83■□□□□ 0.6
RNF4-215ENST00000511843 CHRNA2Q15822 529 aa18.83■□□□□ 0.6
RNF4-215ENST00000511843 BTG4Q9NY30 223 aa18.83■□□□□ 0.6
RNF4-215ENST00000511843 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.6
RNF4-215ENST00000511843 UPF1Q92900 1129 aaKnown RBP eCLIP18.82■□□□□ 0.6
RNF4-215ENST00000511843 PRDM11Q9NQV5 511 aa18.82■□□□□ 0.6
RNF4-215ENST00000511843 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
RNF4-215ENST00000511843 ST20-MTHFSA0A0A6YYL1 179 aa18.81■□□□□ 0.6
RNF4-215ENST00000511843 SSH2Q76I76 1423 aa18.81■□□□□ 0.6
RNF4-215ENST00000511843 VPS72Q15906 364 aa18.8■□□□□ 0.6
RNF4-215ENST00000511843 USP19O94966 1318 aa18.79■□□□□ 0.6
RNF4-215ENST00000511843 CCER1Q8TC90 406 aaPredicted RBP18.79■□□□□ 0.6
RNF4-215ENST00000511843 EP400Q96L91 3159 aa18.79■□□□□ 0.6
RNF4-215ENST00000511843 CPSF1Q10570 1443 aaKnown RBP18.78■□□□□ 0.6
RNF4-215ENST00000511843 TESK2Q96S53 571 aa18.78■□□□□ 0.6
RNF4-215ENST00000511843 LMO7Q8WWI1 1683 aa18.78■□□□□ 0.6
RNF4-215ENST00000511843 CD163L1Q9NR16 1453 aa18.77■□□□□ 0.6
RNF4-215ENST00000511843 CLSPNQ9HAW4 1339 aa18.77■□□□□ 0.6
RNF4-215ENST00000511843 NLRP6P59044 892 aa18.77■□□□□ 0.6
RNF4-215ENST00000511843 NLRP13Q86W25 1043 aa18.77■□□□□ 0.6
RNF4-215ENST00000511843 TMC1Q8TDI8 760 aa18.77■□□□□ 0.6
RNF4-215ENST00000511843 RGPD5Q99666 1765 aa18.77■□□□□ 0.6
RNF4-215ENST00000511843 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.6
RNF4-215ENST00000511843 KTN1Q86UP2 1357 aaKnown RBP18.77■□□□□ 0.6
RNF4-215ENST00000511843 USP47Q96K76 1375 aa18.77■□□□□ 0.6
RNF4-215ENST00000511843 SLIT3O75094 1523 aa18.76■□□□□ 0.59
RNF4-215ENST00000511843 SLC12A5Q9H2X9 1139 aa18.76■□□□□ 0.59
RNF4-215ENST00000511843 STRN4Q9NRL3 753 aa18.76■□□□□ 0.59
RNF4-215ENST00000511843 CAMTA1Q9Y6Y1 1673 aa18.76■□□□□ 0.59
RNF4-215ENST00000511843 TTC21BQ7Z4L5 1316 aa18.75■□□□□ 0.59
RNF4-215ENST00000511843 ZBTB7CA1YPR0 619 aa18.75■□□□□ 0.59
RNF4-215ENST00000511843 GCP02774 474 aa18.75■□□□□ 0.59
RNF4-215ENST00000511843 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
RNF4-215ENST00000511843 FAM98CQ17RN3 349 aaKnown RBP18.73■□□□□ 0.59
RNF4-215ENST00000511843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.73■□□□□ 0.59
RNF4-215ENST00000511843 ZNF692Q9BU19 519 aaPredicted RBP18.73■□□□□ 0.59
RNF4-215ENST00000511843 ZRANB1Q9UGI0 708 aa18.73■□□□□ 0.59
RNF4-215ENST00000511843 COL18A1P39060 1754 aa18.73■□□□□ 0.59
RNF4-215ENST00000511843 CPDO75976 1380 aa18.72■□□□□ 0.59
RNF4-215ENST00000511843 A0A0G2JS52 829 aa18.72■□□□□ 0.59
RNF4-215ENST00000511843 SOX12O15370 315 aa18.72■□□□□ 0.59
RNF4-215ENST00000511843 MYT1Q01538 1121 aa18.72■□□□□ 0.59
RNF4-215ENST00000511843 SPATA31A5Q5VU36 1347 aa18.72■□□□□ 0.59
RNF4-215ENST00000511843 SPATA31A7Q8IWB4 1347 aa18.72■□□□□ 0.59
RNF4-215ENST00000511843 THSD7AQ9UPZ6 1657 aa18.71■□□□□ 0.59
RNF4-215ENST00000511843 TIMELESSQ9UNS1 1208 aa18.71■□□□□ 0.59
RNF4-215ENST00000511843 A0A1W2PP64 1363 aa18.7■□□□□ 0.58
RNF4-215ENST00000511843 USP54Q70EL1 1684 aa18.7■□□□□ 0.58
RNF4-215ENST00000511843 TTC21AQ8NDW8 1320 aa18.7■□□□□ 0.58
RNF4-215ENST00000511843 LTN1O94822 1766 aa18.69■□□□□ 0.58
RNF4-215ENST00000511843 NME9Q86XW9 330 aa18.69■□□□□ 0.58
RNF4-215ENST00000511843 NFAT5O94916 1531 aa18.69■□□□□ 0.58
RNF4-215ENST00000511843 ONECUT3O60422 494 aaPredicted RBP18.68■□□□□ 0.58
RNF4-215ENST00000511843 EVA1CP58658 441 aa18.68■□□□□ 0.58
RNF4-215ENST00000511843 HDGFL2Q7Z4V5 671 aaPredicted RBP18.68■□□□□ 0.58
RNF4-215ENST00000511843 USP35Q9P2H5 1018 aa18.68■□□□□ 0.58
RNF4-215ENST00000511843 SPATA31A1Q5TZJ5 1347 aa18.68■□□□□ 0.58
RNF4-215ENST00000511843 MYOM1P52179 1685 aa18.67■□□□□ 0.58
RNF4-215ENST00000511843 COL5A2P05997 1499 aaPredicted RBP18.67■□□□□ 0.58
RNF4-215ENST00000511843 LARP1Q6PKG0 1096 aaKnown RBP18.67■□□□□ 0.58
RNF4-215ENST00000511843 EDC4Q6P2E9 1401 aaKnown RBP18.66■□□□□ 0.58
RNF4-215ENST00000511843 PUS7Q96PZ0 661 aaKnown RBP18.66■□□□□ 0.58
RNF4-215ENST00000511843 TERF2IPQ9NYB0 399 aa18.66■□□□□ 0.58
RNF4-215ENST00000511843 FAM182BQ5T319 152 aa18.65■□□□□ 0.58
RNF4-215ENST00000511843 KRT27Q7Z3Y8 459 aa18.65■□□□□ 0.58
RNF4-215ENST00000511843 TMF1P82094 1093 aa18.64■□□□□ 0.57
RNF4-215ENST00000511843 WNK3Q9BYP7 1800 aa18.64■□□□□ 0.57
RNF4-215ENST00000511843 AATKQ6ZMQ8 1374 aa18.64■□□□□ 0.57
RNF4-215ENST00000511843 AXIN2Q9Y2T1 843 aa18.63■□□□□ 0.57
RNF4-215ENST00000511843 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
RNF4-215ENST00000511843 KCNH5Q8NCM2 988 aa18.62■□□□□ 0.57
RNF4-215ENST00000511843 USP31Q70CQ4 1352 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms