RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 ANKK1Q8NFD2 765 aa11.16□□□□□ -0.62
NR1I3-229ENST00000511748 GPBP1L1Q9HC44 474 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-229ENST00000511748 FMN1Q68DA7 1419 aa11.16□□□□□ -0.62
NR1I3-229ENST00000511748 SIGLEC1Q9BZZ2 1709 aa11.15□□□□□ -0.62
NR1I3-229ENST00000511748 THSD4Q6ZMP0 1018 aa11.15□□□□□ -0.62
NR1I3-229ENST00000511748 KDM5CP41229 1560 aa11.15□□□□□ -0.62
NR1I3-229ENST00000511748 STRCQ7RTU9 1775 aa11.14□□□□□ -0.63
NR1I3-229ENST00000511748 SLC10A3P09131 477 aa11.14□□□□□ -0.63
NR1I3-229ENST00000511748 TTLL12Q14166 644 aaPredicted RBP11.14□□□□□ -0.63
NR1I3-229ENST00000511748 LRCH3Q96II8 777 aa11.14□□□□□ -0.63
NR1I3-229ENST00000511748 GPCPD1Q9NPB8 672 aa11.14□□□□□ -0.63
NR1I3-229ENST00000511748 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.14□□□□□ -0.63
NR1I3-229ENST00000511748 SPATA31D1Q6ZQQ2 1576 aa11.14□□□□□ -0.63
NR1I3-229ENST00000511748 CLIP1P30622 1438 aa11.13□□□□□ -0.63
NR1I3-229ENST00000511748 CNTLNQ9NXG0 1405 aa11.13□□□□□ -0.63
NR1I3-229ENST00000511748 CLCN1P35523 988 aa11.13□□□□□ -0.63
NR1I3-229ENST00000511748 BRPF1P55201 1214 aaPredicted RBP11.13□□□□□ -0.63
NR1I3-229ENST00000511748 GIGYF2Q6Y7W6 1299 aaKnown RBP11.13□□□□□ -0.63
NR1I3-229ENST00000511748 ESF1Q9H501 851 aaKnown RBP11.13□□□□□ -0.63
NR1I3-229ENST00000511748 FAM217BQ9NTX9 383 aaPredicted RBP11.13□□□□□ -0.63
NR1I3-229ENST00000511748 KIF14Q15058 1648 aa11.13□□□□□ -0.63
NR1I3-229ENST00000511748 RNF166Q96A37 237 aaPredicted RBP11.12□□□□□ -0.63
NR1I3-229ENST00000511748 AGLP35573 1532 aa11.12□□□□□ -0.63
NR1I3-229ENST00000511748 MLH3Q9UHC1 1453 aa11.12□□□□□ -0.63
NR1I3-229ENST00000511748 TRAPPC8Q9Y2L5 1435 aa11.11□□□□□ -0.63
NR1I3-229ENST00000511748 DDX11L8A8MPP1 907 aa11.11□□□□□ -0.63
NR1I3-229ENST00000511748 MS4A1P11836 297 aa11.11□□□□□ -0.63
NR1I3-229ENST00000511748 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
NR1I3-229ENST00000511748 RNF40O75150 1001 aa11.1□□□□□ -0.63
NR1I3-229ENST00000511748 HDGFP51858 240 aaKnown RBP11.1□□□□□ -0.63
NR1I3-229ENST00000511748 WBP1LQ9NX94 342 aa11.1□□□□□ -0.63
NR1I3-229ENST00000511748 TROQ12816 1431 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-229ENST00000511748 ARHGAP5Q13017 1502 aa11.09□□□□□ -0.63
NR1I3-229ENST00000511748 CDK13Q14004 1512 aaKnown RBP11.09□□□□□ -0.63
NR1I3-229ENST00000511748 SSTR3P32745 418 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-229ENST00000511748 ILDR2Q71H61 639 aa11.09□□□□□ -0.63
NR1I3-229ENST00000511748 NPATQ14207 1427 aa11.09□□□□□ -0.63
NR1I3-229ENST00000511748 DIP2CQ9Y2E4 1556 aa11.08□□□□□ -0.64
NR1I3-229ENST00000511748 RANGAP1P46060 587 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-229ENST00000511748 CEBPAP49715 358 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-229ENST00000511748 PTPN5P54829 565 aa11.08□□□□□ -0.64
NR1I3-229ENST00000511748 NEUROD2Q15784 382 aa11.08□□□□□ -0.64
NR1I3-229ENST00000511748 SLF2Q8IX21 1173 aa11.08□□□□□ -0.64
NR1I3-229ENST00000511748 KDM4CQ9H3R0 1056 aa11.08□□□□□ -0.64
NR1I3-229ENST00000511748 NCOA1Q15788 1441 aa11.08□□□□□ -0.64
NR1I3-229ENST00000511748 C3P01024 1663 aa11.08□□□□□ -0.64
NR1I3-229ENST00000511748 CD46P15529 392 aa11.07□□□□□ -0.64
NR1I3-229ENST00000511748 TSR3Q9UJK0 312 aaKnown RBP11.07□□□□□ -0.64
NR1I3-229ENST00000511748 LTBP4Q8N2S1 1624 aa11.06□□□□□ -0.64
NR1I3-229ENST00000511748 MROH2AA6NES4 1674 aa11.05□□□□□ -0.64
NR1I3-229ENST00000511748 PPP4CP60510 307 aa11.05□□□□□ -0.64
NR1I3-229ENST00000511748 AFAP1Q8N556 730 aa11.05□□□□□ -0.64
NR1I3-229ENST00000511748 RDH13Q8NBN7 331 aa11.05□□□□□ -0.64
NR1I3-229ENST00000511748 APLP1P51693 650 aa11.04□□□□□ -0.64
NR1I3-229ENST00000511748 ABCA6Q8N139 1617 aa11.04□□□□□ -0.64
NR1I3-229ENST00000511748 SULF1Q8IWU6 871 aa11.03□□□□□ -0.64
NR1I3-229ENST00000511748 FAM117AQ9C073 453 aa11.03□□□□□ -0.64
NR1I3-229ENST00000511748 ABCC1P33527 1531 aa11.03□□□□□ -0.64
NR1I3-229ENST00000511748 PREX2Q70Z35 1606 aa11.02□□□□□ -0.64
NR1I3-229ENST00000511748 PLA2R1Q13018 1463 aa11.02□□□□□ -0.65
NR1I3-229ENST00000511748 CCDC18Q5T9S5 1454 aa11.02□□□□□ -0.65
NR1I3-229ENST00000511748 CFHP08603 1231 aa11.02□□□□□ -0.65
NR1I3-229ENST00000511748 ATP1B4Q9UN42 357 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-229ENST00000511748 GCGRP47871 477 aa11.01□□□□□ -0.65
NR1I3-229ENST00000511748 BEGAINQ9BUH8 593 aa11.01□□□□□ -0.65
NR1I3-229ENST00000511748 CDC42BPBQ9Y5S2 1711 aa11.01□□□□□ -0.65
NR1I3-229ENST00000511748 CAMSAP1Q5T5Y3 1602 aa11□□□□□ -0.65
NR1I3-229ENST00000511748 ITSN2Q9NZM3 1697 aa11□□□□□ -0.65
NR1I3-229ENST00000511748 ARHGAP35Q9NRY4 1499 aa11□□□□□ -0.65
NR1I3-229ENST00000511748 PLEKHG3A1L390 1219 aa10.99□□□□□ -0.65
NR1I3-229ENST00000511748 ZNF142P52746 1687 aaPredicted RBP10.98□□□□□ -0.65
NR1I3-229ENST00000511748 KIDINS220Q9ULH0 1771 aa10.98□□□□□ -0.65
NR1I3-229ENST00000511748 UBTFP17480 764 aaKnown RBP10.98□□□□□ -0.65
NR1I3-229ENST00000511748 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
NR1I3-229ENST00000511748 ZMYM3Q14202 1370 aa10.98□□□□□ -0.65
NR1I3-229ENST00000511748 UBAP1LF5GYI3 381 aa10.97□□□□□ -0.65
NR1I3-229ENST00000511748 SLC4A3P48751 1232 aa10.97□□□□□ -0.65
NR1I3-229ENST00000511748 PLEKHH2Q8IVE3 1493 aa10.97□□□□□ -0.65
NR1I3-229ENST00000511748 TCOF1Q13428 1488 aaKnown RBP10.96□□□□□ -0.65
NR1I3-229ENST00000511748 ACTN4O43707 911 aaKnown RBP10.96□□□□□ -0.65
NR1I3-229ENST00000511748 FUT2Q10981 343 aa10.96□□□□□ -0.65
NR1I3-229ENST00000511748 SPIRE2Q8WWL2 714 aa10.96□□□□□ -0.65
NR1I3-229ENST00000511748 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
NR1I3-229ENST00000511748 CASKIN1Q8WXD9 1431 aa10.95□□□□□ -0.66
NR1I3-229ENST00000511748 KIAA1107Q9UPP5 1409 aa10.95□□□□□ -0.66
NR1I3-229ENST00000511748 RSPH4AQ5TD94 716 aa10.95□□□□□ -0.66
NR1I3-229ENST00000511748 HLA-CQ95604 372 aa10.95□□□□□ -0.66
NR1I3-229ENST00000511748 MYO3AQ8NEV4 1616 aa10.95□□□□□ -0.66
NR1I3-229ENST00000511748 SAMD9LQ8IVG5 1584 aa10.94□□□□□ -0.66
NR1I3-229ENST00000511748 CEP170BQ9Y4F5 1589 aaPredicted RBP10.94□□□□□ -0.66
NR1I3-229ENST00000511748 SPAG9O60271 1321 aaKnown RBP10.94□□□□□ -0.66
NR1I3-229ENST00000511748 PUS10Q3MIT2 529 aaKnown RBP10.94□□□□□ -0.66
NR1I3-229ENST00000511748 IL27Q8NEV9 243 aa10.94□□□□□ -0.66
NR1I3-229ENST00000511748 SUPT6HQ7KZ85 1726 aaKnown RBP10.94□□□□□ -0.66
NR1I3-229ENST00000511748 CPS1P31327 1500 aa10.94□□□□□ -0.66
NR1I3-229ENST00000511748 CDC42BPAQ5VT25 1732 aa10.93□□□□□ -0.66
NR1I3-229ENST00000511748 KDM4AO75164 1064 aa10.93□□□□□ -0.66
NR1I3-229ENST00000511748 KMT5BQ4FZB7 885 aa10.93□□□□□ -0.66
NR1I3-229ENST00000511748 PLXNC1O60486 1568 aa10.93□□□□□ -0.66
NR1I3-229ENST00000511748 FAM135AQ9P2D6 1515 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms