RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 USB1Q9BQ65 265 aaKnown RBP8.46□□□□□ -1.06
MBD4-209ENST00000511009 GDF9O60383 454 aa8.45□□□□□ -1.06
MBD4-209ENST00000511009 LAPTM4AQ15012 233 aa8.45□□□□□ -1.06
MBD4-209ENST00000511009 HRCP23327 699 aa8.44□□□□□ -1.06
MBD4-209ENST00000511009 PRR20EP86478 221 aa8.44□□□□□ -1.06
MBD4-209ENST00000511009 PRR20CP86479 221 aa8.44□□□□□ -1.06
MBD4-209ENST00000511009 PRR20DP86480 221 aa8.44□□□□□ -1.06
MBD4-209ENST00000511009 PRR20BP86481 221 aa8.44□□□□□ -1.06
MBD4-209ENST00000511009 PRR20AP86496 221 aa8.44□□□□□ -1.06
MBD4-209ENST00000511009 RPIAP49247 311 aa8.43□□□□□ -1.06
MBD4-209ENST00000511009 CALR3Q96L12 384 aaKnown RBP8.43□□□□□ -1.06
MBD4-209ENST00000511009 PKD2L1Q9P0L9 805 aa8.43□□□□□ -1.06
MBD4-209ENST00000511009 TBC1D2BQ9UPU7 963 aa8.43□□□□□ -1.06
MBD4-209ENST00000511009 ZBTB7CA1YPR0 619 aa8.42□□□□□ -1.06
MBD4-209ENST00000511009 ZNF697Q5TEC3 545 aa8.42□□□□□ -1.06
MBD4-209ENST00000511009 TSC1Q92574 1164 aa8.42□□□□□ -1.06
MBD4-209ENST00000511009 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
MBD4-209ENST00000511009 MTMR2Q13614 643 aa8.41□□□□□ -1.06
MBD4-209ENST00000511009 RETREG3Q86VR2 466 aa8.41□□□□□ -1.06
MBD4-209ENST00000511009 HELBQ8NG08 1087 aaPredicted RBP8.41□□□□□ -1.06
MBD4-209ENST00000511009 NDUFB9Q9Y6M9 179 aa8.41□□□□□ -1.06
MBD4-209ENST00000511009 C6orf229H3BNL8 230 aa8.39□□□□□ -1.07
MBD4-209ENST00000511009 JUNDP17535 347 aa8.39□□□□□ -1.07
MBD4-209ENST00000511009 Q6ZNB5 142 aa8.39□□□□□ -1.07
MBD4-209ENST00000511009 GLMNQ92990 594 aa8.39□□□□□ -1.07
MBD4-209ENST00000511009 POM121CA8CG34 1229 aa8.37□□□□□ -1.07
MBD4-209ENST00000511009 CTDSPL2Q05D32 466 aa8.37□□□□□ -1.07
MBD4-209ENST00000511009 WASHC4Q2M389 1173 aa8.36□□□□□ -1.07
MBD4-209ENST00000511009 GJD4Q96KN9 370 aaPredicted RBP8.36□□□□□ -1.07
MBD4-209ENST00000511009 TNFRSF10AO00220 468 aa8.35□□□□□ -1.07
MBD4-209ENST00000511009 PTCRAQ6ISU1 281 aaPredicted RBP8.35□□□□□ -1.07
MBD4-209ENST00000511009 TRAF7Q6Q0C0 670 aa8.35□□□□□ -1.07
MBD4-209ENST00000511009 TOR4AQ9NXH8 423 aa8.35□□□□□ -1.07
MBD4-209ENST00000511009 ACIN1Q9UKV3 1341 aaKnown RBP8.34□□□□□ -1.07
MBD4-209ENST00000511009 SKOR1P84550 965 aa8.34□□□□□ -1.07
MBD4-209ENST00000511009 TRIM32Q13049 653 aa8.34□□□□□ -1.07
MBD4-209ENST00000511009 HMX1Q9NP08 348 aaPredicted RBP8.34□□□□□ -1.07
MBD4-209ENST00000511009 PPP1R15AO75807 674 aaPredicted RBP8.33□□□□□ -1.08
MBD4-209ENST00000511009 CD2BP2O95400 341 aaKnown RBP8.33□□□□□ -1.08
MBD4-209ENST00000511009 DESI1Q6ICB0 168 aa8.33□□□□□ -1.08
MBD4-209ENST00000511009 LRRN4Q8WUT4 740 aa8.33□□□□□ -1.08
MBD4-209ENST00000511009 TRAIPQ9BWF2 469 aa8.33□□□□□ -1.08
MBD4-209ENST00000511009 CFAP99D6REC4 459 aa8.32□□□□□ -1.08
MBD4-209ENST00000511009 IRF5Q13568 498 aa8.32□□□□□ -1.08
MBD4-209ENST00000511009 HDGFL1Q5TGJ6 251 aa8.32□□□□□ -1.08
MBD4-209ENST00000511009 PRR7Q8TB68 274 aa8.32□□□□□ -1.08
MBD4-209ENST00000511009 DGAT1O75907 488 aa8.31□□□□□ -1.08
MBD4-209ENST00000511009 KCTD17Q8N5Z5 321 aa8.31□□□□□ -1.08
MBD4-209ENST00000511009 RETREG2Q8NC44 543 aa8.31□□□□□ -1.08
MBD4-209ENST00000511009 NUDT12Q9BQG2 462 aa8.31□□□□□ -1.08
MBD4-209ENST00000511009 TRIM34Q9BYJ4 488 aa8.31□□□□□ -1.08
MBD4-209ENST00000511009 WNT7AO00755 349 aa8.3□□□□□ -1.08
MBD4-209ENST00000511009 MYT1Q01538 1121 aa8.3□□□□□ -1.08
MBD4-209ENST00000511009 VAC14Q08AM6 782 aa8.3□□□□□ -1.08
MBD4-209ENST00000511009 PTPRNQ16849 979 aa8.3□□□□□ -1.08
MBD4-209ENST00000511009 PDE4CQ08493 712 aa8.29□□□□□ -1.08
MBD4-209ENST00000511009 FOXC1Q12948 553 aa8.29□□□□□ -1.08
MBD4-209ENST00000511009 AEBP1Q8IUX7 1158 aa8.29□□□□□ -1.08
MBD4-209ENST00000511009 EVA1BQ9NVM1 165 aa8.29□□□□□ -1.08
MBD4-209ENST00000511009 ZBTB24O43167 697 aaPredicted RBP8.28□□□□□ -1.08
MBD4-209ENST00000511009 CCNYL3P0C7X3 344 aa8.28□□□□□ -1.08
MBD4-209ENST00000511009 RFX1P22670 979 aa8.28□□□□□ -1.08
MBD4-209ENST00000511009 RANGAP1P46060 587 aaPredicted RBP8.28□□□□□ -1.08
MBD4-209ENST00000511009 LYPD8Q6UX82 237 aa8.28□□□□□ -1.08
MBD4-209ENST00000511009 PNMA1Q8ND90 353 aa8.28□□□□□ -1.08
MBD4-209ENST00000511009 CCDC9Q9Y3X0 531 aaKnown RBP8.28□□□□□ -1.08
MBD4-209ENST00000511009 F12P00748 615 aaPredicted RBP8.27□□□□□ -1.09
MBD4-209ENST00000511009 AVPP01185 164 aa8.27□□□□□ -1.09
MBD4-209ENST00000511009 WNT7BP56706 349 aa8.27□□□□□ -1.09
MBD4-209ENST00000511009 CCDC24Q8N4L8 307 aa8.27□□□□□ -1.09
MBD4-209ENST00000511009 NR6A1Q15406 480 aa8.26□□□□□ -1.09
MBD4-209ENST00000511009 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
MBD4-209ENST00000511009 PBXIP1Q96AQ6 731 aa8.26□□□□□ -1.09
MBD4-209ENST00000511009 MRGPRX2Q96LB1 330 aa8.26□□□□□ -1.09
MBD4-209ENST00000511009 PER1O15534 1290 aaPredicted RBP8.25□□□□□ -1.09
MBD4-209ENST00000511009 SIAH2O43255 324 aa8.25□□□□□ -1.09
MBD4-209ENST00000511009 SOX11P35716 441 aa8.25□□□□□ -1.09
MBD4-209ENST00000511009 KCNH2Q12809 1159 aa8.25□□□□□ -1.09
MBD4-209ENST00000511009 CRIPAKQ8N1N5 446 aa8.25□□□□□ -1.09
MBD4-209ENST00000511009 ADAMTS19Q8TE59 1207 aa8.25□□□□□ -1.09
MBD4-209ENST00000511009 FAM187AA6NFU0 413 aa8.24□□□□□ -1.09
MBD4-209ENST00000511009 SMPD1P17405 629 aa8.24□□□□□ -1.09
MBD4-209ENST00000511009 SH3BP2P78314 561 aa8.24□□□□□ -1.09
MBD4-209ENST00000511009 SEMA3FQ13275 785 aa8.24□□□□□ -1.09
MBD4-209ENST00000511009 PKDCCQ504Y2 493 aa8.24□□□□□ -1.09
MBD4-209ENST00000511009 RC3H1Q5TC82 1133 aaKnown RBP8.24□□□□□ -1.09
MBD4-209ENST00000511009 PPP1R12CQ9BZL4 782 aa8.24□□□□□ -1.09
MBD4-209ENST00000511009 UNC93B1Q9H1C4 597 aa8.24□□□□□ -1.09
MBD4-209ENST00000511009 GPR37L1O60883 481 aa8.23□□□□□ -1.09
MBD4-209ENST00000511009 AAASQ9NRG9 546 aa8.23□□□□□ -1.09
MBD4-209ENST00000511009 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.22□□□□□ -1.09
MBD4-209ENST00000511009 CSB-PGBD3P0DP91 1061 aa8.22□□□□□ -1.09
MBD4-209ENST00000511009 SNIP1Q8TAD8 396 aaKnown RBP8.22□□□□□ -1.09
MBD4-209ENST00000511009 ALG2Q9H553 416 aa8.22□□□□□ -1.09
MBD4-209ENST00000511009 J3QL48 77 aa8.21□□□□□ -1.1
MBD4-209ENST00000511009 ST8SIA5O15466 376 aa8.21□□□□□ -1.1
MBD4-209ENST00000511009 LMOD1P29536 600 aaPredicted RBP8.21□□□□□ -1.1
MBD4-209ENST00000511009 SMCPP49901 116 aaPredicted RBP8.21□□□□□ -1.1
MBD4-209ENST00000511009 EIF4G2P78344 907 aaKnown RBP eCLIP8.21□□□□□ -1.1
MBD4-209ENST00000511009 CFAP70Q5T0N1 1121 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms