RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 PPLO60437 1756 aa12.69□□□□□ -0.38
PDPN-209ENST00000510906 ROBO2Q9HCK4 1378 aa12.69□□□□□ -0.38
PDPN-209ENST00000510906 TTLL13PA6NNM8 815 aa12.68□□□□□ -0.38
PDPN-209ENST00000510906 POTEAQ6S8J7 498 aa12.68□□□□□ -0.38
PDPN-209ENST00000510906 ADGRL3Q9HAR2 1447 aa12.68□□□□□ -0.38
PDPN-209ENST00000510906 SETD1AO15047 1707 aaKnown RBP12.68□□□□□ -0.38
PDPN-209ENST00000510906 ANKRD30BQ9BXX2 1392 aa12.68□□□□□ -0.38
PDPN-209ENST00000510906 BRINP3Q76B58 766 aa12.67□□□□□ -0.38
PDPN-209ENST00000510906 PTCH1Q13635 1447 aa12.67□□□□□ -0.38
PDPN-209ENST00000510906 MST1RQ04912 1400 aa12.66□□□□□ -0.38
PDPN-209ENST00000510906 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
PDPN-209ENST00000510906 ARHGEF1Q92888 912 aaKnown RBP12.66□□□□□ -0.38
PDPN-209ENST00000510906 PRAG1Q86YV5 1406 aa12.65□□□□□ -0.38
PDPN-209ENST00000510906 MFSD10Q14728 455 aa12.65□□□□□ -0.38
PDPN-209ENST00000510906 E2F4Q16254 413 aa12.65□□□□□ -0.38
PDPN-209ENST00000510906 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
PDPN-209ENST00000510906 PIK3C2GO75747 1445 aa12.64□□□□□ -0.39
PDPN-209ENST00000510906 HRCP23327 699 aa12.64□□□□□ -0.39
PDPN-209ENST00000510906 TMEM132EQ6IEE7 984 aa12.64□□□□□ -0.39
PDPN-209ENST00000510906 BMP2KQ9NSY1 1161 aaPredicted RBP12.64□□□□□ -0.39
PDPN-209ENST00000510906 PHLPP1O60346 1717 aa12.64□□□□□ -0.39
PDPN-209ENST00000510906 JCADQ9P266 1359 aa12.64□□□□□ -0.39
PDPN-209ENST00000510906 COL16A1Q07092 1604 aaPredicted RBP12.63□□□□□ -0.39
PDPN-209ENST00000510906 STK26Q9P289 416 aa12.63□□□□□ -0.39
PDPN-209ENST00000510906 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
PDPN-209ENST00000510906 AHDC1Q5TGY3 1603 aaPredicted RBP12.62□□□□□ -0.39
PDPN-209ENST00000510906 NALCNQ8IZF0 1738 aa12.62□□□□□ -0.39
PDPN-209ENST00000510906 IFT172Q9UG01 1749 aa12.62□□□□□ -0.39
PDPN-209ENST00000510906 LRPPRCP42704 1394 aaKnown RBP12.62□□□□□ -0.39
PDPN-209ENST00000510906 PDE4AP27815 886 aa12.61□□□□□ -0.39
PDPN-209ENST00000510906 CLCN6P51797 869 aa12.61□□□□□ -0.39
PDPN-209ENST00000510906 DDX17Q92841 729 aaKnown RBP12.61□□□□□ -0.39
PDPN-209ENST00000510906 MYOM2P54296 1465 aa12.6□□□□□ -0.39
PDPN-209ENST00000510906 C1orf167Q5SNV9 1468 aa12.6□□□□□ -0.39
PDPN-209ENST00000510906 NRXN1Q9ULB1 1477 aa12.6□□□□□ -0.39
PDPN-209ENST00000510906 GALR2O43603 387 aaPredicted RBP12.6□□□□□ -0.39
PDPN-209ENST00000510906 CFAP70Q5T0N1 1121 aa12.6□□□□□ -0.39
PDPN-209ENST00000510906 WAPLQ7Z5K2 1190 aa12.6□□□□□ -0.39
PDPN-209ENST00000510906 C14orf93Q9H972 538 aaKnown RBP12.6□□□□□ -0.39
PDPN-209ENST00000510906 TECPR2O15040 1411 aa12.6□□□□□ -0.39
PDPN-209ENST00000510906 ABCC11Q96J66 1382 aa12.59□□□□□ -0.39
PDPN-209ENST00000510906 PLEKHH1Q9ULM0 1364 aa12.59□□□□□ -0.39
PDPN-209ENST00000510906 UPF1Q92900 1129 aaKnown RBP eCLIP12.59□□□□□ -0.39
PDPN-209ENST00000510906 ORAI2Q96SN7 254 aa12.59□□□□□ -0.39
PDPN-209ENST00000510906 YTHDC2Q9H6S0 1430 aaKnown RBP12.59□□□□□ -0.39
PDPN-209ENST00000510906 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDPN-209ENST00000510906 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
PDPN-209ENST00000510906 LRP6O75581 1613 aa12.58□□□□□ -0.4
PDPN-209ENST00000510906 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
PDPN-209ENST00000510906 SPATA31A6Q5VVP1 1343 aa12.57□□□□□ -0.4
PDPN-209ENST00000510906 DCAF11Q8TEB1 546 aa12.56□□□□□ -0.4
PDPN-209ENST00000510906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDPN-209ENST00000510906 ARIH1Q9Y4X5 557 aaPredicted RBP12.56□□□□□ -0.4
PDPN-209ENST00000510906 NUTM2FA1L443 756 aa12.55□□□□□ -0.4
PDPN-209ENST00000510906 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
PDPN-209ENST00000510906 DDX27Q96GQ7 796 aaKnown RBP12.55□□□□□ -0.4
PDPN-209ENST00000510906 CDC42BPGQ6DT37 1551 aa12.55□□□□□ -0.4
PDPN-209ENST00000510906 NHSL1Q5SYE7 1610 aa12.55□□□□□ -0.4
PDPN-209ENST00000510906 DHX57Q6P158 1386 aaKnown RBP12.55□□□□□ -0.4
PDPN-209ENST00000510906 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
PDPN-209ENST00000510906 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
PDPN-209ENST00000510906 EVX2Q03828 476 aa12.54□□□□□ -0.4
PDPN-209ENST00000510906 CAMK2BQ13554 666 aa12.54□□□□□ -0.4
PDPN-209ENST00000510906 MEX3CQ5U5Q3 659 aaKnown RBP12.54□□□□□ -0.4
PDPN-209ENST00000510906 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
PDPN-209ENST00000510906 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
PDPN-209ENST00000510906 ESCO1Q5FWF5 840 aa12.53□□□□□ -0.4
PDPN-209ENST00000510906 SIRT1Q96EB6 747 aa12.53□□□□□ -0.4
PDPN-209ENST00000510906 SHPRHQ149N8 1683 aa12.53□□□□□ -0.4
PDPN-209ENST00000510906 KNDC1Q76NI1 1749 aa12.53□□□□□ -0.4
PDPN-209ENST00000510906 PNPLA6Q8IY17 1366 aa12.53□□□□□ -0.4
PDPN-209ENST00000510906 SAFB2Q14151 953 aaKnown RBP eCLIP12.52□□□□□ -0.41
PDPN-209ENST00000510906 PRAM1Q96QH2 718 aa12.52□□□□□ -0.41
PDPN-209ENST00000510906 SOS2Q07890 1332 aaPredicted RBP12.52□□□□□ -0.41
PDPN-209ENST00000510906 LAMC1P11047 1609 aa12.51□□□□□ -0.41
PDPN-209ENST00000510906 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
PDPN-209ENST00000510906 HAX1O00165 279 aa12.51□□□□□ -0.41
PDPN-209ENST00000510906 IFFO2Q5TF58 517 aa12.51□□□□□ -0.41
PDPN-209ENST00000510906 ADGRB1O14514 1584 aa12.51□□□□□ -0.41
PDPN-209ENST00000510906 FOXO3O43524 673 aa12.5□□□□□ -0.41
PDPN-209ENST00000510906 STAC3Q96MF2 364 aa12.5□□□□□ -0.41
PDPN-209ENST00000510906 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
PDPN-209ENST00000510906 NPHP3Q7Z494 1330 aa12.49□□□□□ -0.41
PDPN-209ENST00000510906 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
PDPN-209ENST00000510906 PDCD7Q8N8D1 485 aaKnown RBP12.49□□□□□ -0.41
PDPN-209ENST00000510906 POGKQ9P215 609 aa12.49□□□□□ -0.41
PDPN-209ENST00000510906 DLC1Q96QB1 1528 aa12.48□□□□□ -0.41
PDPN-209ENST00000510906 SEMA3EO15041 775 aa12.48□□□□□ -0.41
PDPN-209ENST00000510906 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
PDPN-209ENST00000510906 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
PDPN-209ENST00000510906 PXDNQ92626 1479 aa12.47□□□□□ -0.41
PDPN-209ENST00000510906 TULP1O00294 542 aaPredicted RBP12.47□□□□□ -0.41
PDPN-209ENST00000510906 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
PDPN-209ENST00000510906 ZNF772Q68DY9 489 aaPredicted RBP12.47□□□□□ -0.41
PDPN-209ENST00000510906 FMN2Q9NZ56 1722 aa12.46□□□□□ -0.41
PDPN-209ENST00000510906 AFF2P51816 1311 aa12.46□□□□□ -0.41
PDPN-209ENST00000510906 ADAMTS2O95450 1211 aa12.46□□□□□ -0.41
PDPN-209ENST00000510906 C8orf37Q96NL8 207 aa12.46□□□□□ -0.41
PDPN-209ENST00000510906 HIRIP3Q9BW71 556 aaPredicted RBP12.46□□□□□ -0.41
PDPN-209ENST00000510906 MINK1Q8N4C8 1332 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms