RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 MED14O60244 1454 aa6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 NLRP1Q9C000 1473 aa6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 CD163L1Q9NR16 1453 aa6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 A0A1W2PP64 1363 aa6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 PLEKHH1Q9ULM0 1364 aa6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 CGNL1Q0VF96 1302 aa6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 ZNF521Q96K83 1311 aa6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 MLECQ14165 292 aa6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 WDR43Q15061 677 aaKnown RBP eCLIP6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 PPP4R2Q9NY27 417 aa6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 KNDC1Q76NI1 1749 aa6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 CPS1P31327 1500 aa6.35□□□□□ -1.39
PDLIM5-214ENST00000510099 TMEM2Q9UHN6 1383 aa6.34□□□□□ -1.39
PDLIM5-214ENST00000510099 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.34□□□□□ -1.39
PDLIM5-214ENST00000510099 PRAM1Q96QH2 718 aa6.34□□□□□ -1.39
PDLIM5-214ENST00000510099 SLC12A5Q9H2X9 1139 aa6.34□□□□□ -1.39
PDLIM5-214ENST00000510099 TSHZ2Q9NRE2 1034 aa6.34□□□□□ -1.39
PDLIM5-214ENST00000510099 ADAMTS8Q9UP79 889 aa6.34□□□□□ -1.39
PDLIM5-214ENST00000510099 ATP7BP35670 1465 aa6.34□□□□□ -1.4
PDLIM5-214ENST00000510099 IQSEC2Q5JU85 1478 aa6.34□□□□□ -1.4
PDLIM5-214ENST00000510099 FAM135BQ49AJ0 1406 aa6.33□□□□□ -1.4
PDLIM5-214ENST00000510099 UBR1Q8IWV7 1749 aa6.33□□□□□ -1.4
PDLIM5-214ENST00000510099 SHPRHQ149N8 1683 aa6.33□□□□□ -1.4
PDLIM5-214ENST00000510099 SENP3-EIF4A1A0A087X0R7 540 aa6.33□□□□□ -1.4
PDLIM5-214ENST00000510099 PLEKHG5O94827 1062 aa6.33□□□□□ -1.4
PDLIM5-214ENST00000510099 TIE1P35590 1138 aa6.33□□□□□ -1.4
PDLIM5-214ENST00000510099 RRP1P56182 461 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-214ENST00000510099 CDAN1Q8IWY9 1227 aa6.33□□□□□ -1.4
PDLIM5-214ENST00000510099 ESF1Q9H501 851 aaKnown RBP6.33□□□□□ -1.4
PDLIM5-214ENST00000510099 CABP2Q9NPB3 220 aa6.33□□□□□ -1.4
PDLIM5-214ENST00000510099 COLQQ9Y215 455 aaPredicted RBP6.33□□□□□ -1.4
PDLIM5-214ENST00000510099 METP08581 1390 aa6.32□□□□□ -1.4
PDLIM5-214ENST00000510099 MINK1Q8N4C8 1332 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-214ENST00000510099 MORC1Q86VD1 984 aa6.32□□□□□ -1.4
PDLIM5-214ENST00000510099 NGEFQ8N5V2 710 aa6.32□□□□□ -1.4
PDLIM5-214ENST00000510099 STK26Q9P289 416 aa6.32□□□□□ -1.4
PDLIM5-214ENST00000510099 RCAN3Q9UKA8 241 aa6.32□□□□□ -1.4
PDLIM5-214ENST00000510099 COL3A1P02461 1466 aaPredicted RBP6.32□□□□□ -1.4
PDLIM5-214ENST00000510099 ARHGAP23Q9P227 1491 aa6.32□□□□□ -1.4
PDLIM5-214ENST00000510099 ADAMTS13Q76LX8 1427 aa6.32□□□□□ -1.4
PDLIM5-214ENST00000510099 PLEKHG1Q9ULL1 1385 aa6.31□□□□□ -1.4
PDLIM5-214ENST00000510099 ADGRB2O60241 1585 aa6.31□□□□□ -1.4
PDLIM5-214ENST00000510099 SLIT1O75093 1534 aa6.31□□□□□ -1.4
PDLIM5-214ENST00000510099 TTLL13PA6NNM8 815 aa6.31□□□□□ -1.4
PDLIM5-214ENST00000510099 SRPK2P78362 688 aaKnown RBP6.31□□□□□ -1.4
PDLIM5-214ENST00000510099 SAFB2Q14151 953 aaKnown RBP eCLIP6.31□□□□□ -1.4
PDLIM5-214ENST00000510099 RASEFQ8IZ41 740 aa6.31□□□□□ -1.4
PDLIM5-214ENST00000510099 CDCA7LQ96GN5 454 aa6.31□□□□□ -1.4
PDLIM5-214ENST00000510099 POGKQ9P215 609 aa6.31□□□□□ -1.4
PDLIM5-214ENST00000510099 ANKRD26Q9UPS8 1709 aa6.3□□□□□ -1.4
PDLIM5-214ENST00000510099 SIRT1Q96EB6 747 aa6.3□□□□□ -1.4
PDLIM5-214ENST00000510099 TERF2IPQ9NYB0 399 aa6.3□□□□□ -1.4
PDLIM5-214ENST00000510099 TRIM35Q9UPQ4 493 aa6.3□□□□□ -1.4
PDLIM5-214ENST00000510099 SALL2Q9Y467 1007 aaPredicted RBP6.3□□□□□ -1.4
PDLIM5-214ENST00000510099 CDC42BPGQ6DT37 1551 aa6.3□□□□□ -1.4
PDLIM5-214ENST00000510099 HDGFP51858 240 aaKnown RBP6.29□□□□□ -1.4
PDLIM5-214ENST00000510099 CPSF1Q10570 1443 aaKnown RBP6.29□□□□□ -1.4
PDLIM5-214ENST00000510099 PTCH1Q13635 1447 aa6.29□□□□□ -1.4
PDLIM5-214ENST00000510099 DIP2AQ14689 1571 aa6.29□□□□□ -1.4
PDLIM5-214ENST00000510099 DUSP27Q5VZP5 1158 aa6.29□□□□□ -1.4
PDLIM5-214ENST00000510099 SLAIN1Q8ND83 568 aa6.29□□□□□ -1.4
PDLIM5-214ENST00000510099 CDK19Q9BWU1 502 aa6.29□□□□□ -1.4
PDLIM5-214ENST00000510099 C3P01024 1663 aa6.29□□□□□ -1.4
PDLIM5-214ENST00000510099 ROBO2Q9HCK4 1378 aa6.29□□□□□ -1.4
PDLIM5-214ENST00000510099 FER1L4A9Z1Z3 1794 aa6.29□□□□□ -1.4
PDLIM5-214ENST00000510099 EDC4Q6P2E9 1401 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 KIF20BQ96Q89 1820 aa6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 APAF1O14727 1248 aa6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 GOLGA2Q08379 1002 aa6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 SLFN5Q08AF3 891 aa6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 B4GALNT3Q6L9W6 998 aa6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 HDGFL2Q7Z4V5 671 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 CCDC146Q8IYE0 955 aa6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 TRMT2AQ8IZ69 625 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 CFAP53Q96M91 514 aa6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 PNPLA6Q8IY17 1366 aa6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 NKTRP30414 1462 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-214ENST00000510099 TOPAZ1Q8N9V7 1692 aa6.27□□□□□ -1.41
PDLIM5-214ENST00000510099 PPIP5K1Q6PFW1 1433 aa6.27□□□□□ -1.41
PDLIM5-214ENST00000510099 E9PSI1 815 aa6.27□□□□□ -1.41
PDLIM5-214ENST00000510099 WASLO00401 505 aaPredicted RBP6.27□□□□□ -1.41
PDLIM5-214ENST00000510099 FYB1O15117 783 aa6.27□□□□□ -1.41
PDLIM5-214ENST00000510099 TNNT2P45379 298 aaPredicted RBP6.27□□□□□ -1.41
PDLIM5-214ENST00000510099 MTHFSP49914 203 aa6.27□□□□□ -1.41
PDLIM5-214ENST00000510099 WAPLQ7Z5K2 1190 aa6.27□□□□□ -1.41
PDLIM5-214ENST00000510099 PCDHB13Q9Y5F0 798 aa6.27□□□□□ -1.41
PDLIM5-214ENST00000510099 PTPRUQ92729 1446 aa6.26□□□□□ -1.41
PDLIM5-214ENST00000510099 MON2Q7Z3U7 1717 aa6.26□□□□□ -1.41
PDLIM5-214ENST00000510099 LTKP29376 864 aa6.26□□□□□ -1.41
PDLIM5-214ENST00000510099 CCDC27Q2M243 656 aa6.26□□□□□ -1.41
PDLIM5-214ENST00000510099 PROM2Q8N271 834 aa6.26□□□□□ -1.41
PDLIM5-214ENST00000510099 RUNDC1Q96C34 613 aa6.26□□□□□ -1.41
PDLIM5-214ENST00000510099 GGNBP2Q9H3C7 697 aa6.26□□□□□ -1.41
PDLIM5-214ENST00000510099 CABP1Q9NZU7 370 aa6.26□□□□□ -1.41
PDLIM5-214ENST00000510099 CDK12Q9NYV4 1490 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-214ENST00000510099 NRKQ7Z2Y5 1582 aa6.26□□□□□ -1.41
PDLIM5-214ENST00000510099 CEP170BQ9Y4F5 1589 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-214ENST00000510099 XRN1Q8IZH2 1706 aaKnown RBP6.25□□□□□ -1.41
PDLIM5-214ENST00000510099 ST18O60284 1047 aa6.25□□□□□ -1.41
PDLIM5-214ENST00000510099 CEBPAP49715 358 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 1371.5 ms