RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 TMEM132EQ6IEE7 984 aa7.59□□□□□ -1.19
HTT-206ENST00000509618 ALS2Q96Q42 1657 aa7.59□□□□□ -1.19
HTT-206ENST00000509618 PPLO60437 1756 aa7.59□□□□□ -1.2
HTT-206ENST00000509618 IFT172Q9UG01 1749 aa7.58□□□□□ -1.2
HTT-206ENST00000509618 APLP2Q06481 763 aa7.58□□□□□ -1.2
HTT-206ENST00000509618 FHDC1Q9C0D6 1143 aaPredicted RBP7.58□□□□□ -1.2
HTT-206ENST00000509618 PHF8Q9UPP1 1060 aa7.58□□□□□ -1.2
HTT-206ENST00000509618 ATF5Q9Y2D1 282 aaPredicted RBP7.58□□□□□ -1.2
HTT-206ENST00000509618 RRBP1Q9P2E9 1410 aaKnown RBP7.58□□□□□ -1.2
HTT-206ENST00000509618 PIAS4Q8N2W9 510 aaPredicted RBP7.57□□□□□ -1.2
HTT-206ENST00000509618 PMFBP1Q8TBY8 1022 aa7.57□□□□□ -1.2
HTT-206ENST00000509618 SGIP1Q9BQI5 828 aa7.57□□□□□ -1.2
HTT-206ENST00000509618 ARHGEF10O15013 1369 aa7.57□□□□□ -1.2
HTT-206ENST00000509618 ROCK1Q13464 1354 aa7.57□□□□□ -1.2
HTT-206ENST00000509618 KNDC1Q76NI1 1749 aa7.56□□□□□ -1.2
HTT-206ENST00000509618 PEAK1Q9H792 1746 aa7.56□□□□□ -1.2
HTT-206ENST00000509618 FAM196AQ6ZSG2 479 aa7.56□□□□□ -1.2
HTT-206ENST00000509618 PROM2Q8N271 834 aa7.56□□□□□ -1.2
HTT-206ENST00000509618 SYT17Q9BSW7 474 aa7.56□□□□□ -1.2
HTT-206ENST00000509618 STRN4Q9NRL3 753 aa7.56□□□□□ -1.2
HTT-206ENST00000509618 USP35Q9P2H5 1018 aa7.56□□□□□ -1.2
HTT-206ENST00000509618 KIAA0232Q92628 1395 aa7.56□□□□□ -1.2
HTT-206ENST00000509618 PRR36Q9H6K5 1346 aa7.55□□□□□ -1.2
HTT-206ENST00000509618 SAFB2Q14151 953 aaKnown RBP eCLIP7.55□□□□□ -1.2
HTT-206ENST00000509618 KIF1BO60333 1816 aa7.55□□□□□ -1.2
HTT-206ENST00000509618 GIGYF1O75420 1035 aaPredicted RBP7.54□□□□□ -1.2
HTT-206ENST00000509618 ITGAEP38570 1179 aa7.54□□□□□ -1.2
HTT-206ENST00000509618 NBPF8Q3BBV2 869 aa7.54□□□□□ -1.2
HTT-206ENST00000509618 NBPF14Q5TI25 921 aa7.54□□□□□ -1.2
HTT-206ENST00000509618 ABCC11Q96J66 1382 aa7.54□□□□□ -1.2
HTT-206ENST00000509618 SSH2Q76I76 1423 aa7.53□□□□□ -1.2
HTT-206ENST00000509618 YTHDC2Q9H6S0 1430 aaKnown RBP7.53□□□□□ -1.2
HTT-206ENST00000509618 PHRF1Q9P1Y6 1649 aaKnown RBP7.53□□□□□ -1.2
HTT-206ENST00000509618 VGFO15240 615 aaPredicted RBP7.53□□□□□ -1.2
HTT-206ENST00000509618 LARP1Q6PKG0 1096 aaKnown RBP7.53□□□□□ -1.2
HTT-206ENST00000509618 PRDM11Q9NQV5 511 aa7.53□□□□□ -1.2
HTT-206ENST00000509618 PIK3C2GO75747 1445 aa7.52□□□□□ -1.2
HTT-206ENST00000509618 DLC1Q96QB1 1528 aa7.52□□□□□ -1.2
HTT-206ENST00000509618 LRRC37A3O60309 1634 aa7.52□□□□□ -1.2
HTT-206ENST00000509618 GOLGB1Q14789 3259 aaKnown RBP7.52□□□□□ -1.21
HTT-206ENST00000509618 DCAF8L1A6NGE4 600 aa7.52□□□□□ -1.21
HTT-206ENST00000509618 PSME1Q06323 249 aa7.52□□□□□ -1.21
HTT-206ENST00000509618 CHD4Q14839 1912 aa7.52□□□□□ -1.21
HTT-206ENST00000509618 ACIN1Q9UKV3 1341 aaKnown RBP7.52□□□□□ -1.21
HTT-206ENST00000509618 LMO7Q8WWI1 1683 aa7.51□□□□□ -1.21
HTT-206ENST00000509618 ZC3H6P61129 1189 aaKnown RBP7.51□□□□□ -1.21
HTT-206ENST00000509618 NUTM2GQ5VZR2 741 aa7.51□□□□□ -1.21
HTT-206ENST00000509618 SPATA31E1Q6ZUB1 1445 aa7.51□□□□□ -1.21
HTT-206ENST00000509618 RGPD3A6NKT7 1758 aaPredicted RBP7.51□□□□□ -1.21
HTT-206ENST00000509618 RGPD4Q7Z3J3 1758 aa7.51□□□□□ -1.21
HTT-206ENST00000509618 BARGINQ6ZT62 677 aa7.5□□□□□ -1.21
HTT-206ENST00000509618 NLGN2Q8NFZ4 835 aa7.5□□□□□ -1.21
HTT-206ENST00000509618 HIRIP3Q9BW71 556 aaPredicted RBP7.5□□□□□ -1.21
HTT-206ENST00000509618 PARP4Q9UKK3 1724 aaKnown RBP7.49□□□□□ -1.21
HTT-206ENST00000509618 ATP7BP35670 1465 aa7.49□□□□□ -1.21
HTT-206ENST00000509618 PAPPAQ13219 1627 aa7.49□□□□□ -1.21
HTT-206ENST00000509618 CAPN15O75808 1086 aa7.49□□□□□ -1.21
HTT-206ENST00000509618 YBX3P16989 372 aaKnown RBP eCLIP7.49□□□□□ -1.21
HTT-206ENST00000509618 PDE3BQ13370 1112 aa7.49□□□□□ -1.21
HTT-206ENST00000509618 PRAM1Q96QH2 718 aa7.49□□□□□ -1.21
HTT-206ENST00000509618 BCL11BQ9C0K0 894 aaPredicted RBP7.49□□□□□ -1.21
HTT-206ENST00000509618 ANKARQ7Z5J8 1434 aa7.49□□□□□ -1.21
HTT-206ENST00000509618 ATP10DQ9P241 1426 aa7.49□□□□□ -1.21
HTT-206ENST00000509618 RPGRIP1LQ68CZ1 1315 aa7.49□□□□□ -1.21
HTT-206ENST00000509618 SBF2Q86WG5 1849 aa7.48□□□□□ -1.21
HTT-206ENST00000509618 OVOS2A0A0G2JMS6 1433 aa7.48□□□□□ -1.21
HTT-206ENST00000509618 OVOS2A0A0J9YW53 1432 aa7.48□□□□□ -1.21
HTT-206ENST00000509618 ZNF827Q17R98 1081 aa7.48□□□□□ -1.21
HTT-206ENST00000509618 OVOS2Q6IE36 1432 aa7.48□□□□□ -1.21
HTT-206ENST00000509618 MAP3K5Q99683 1374 aa7.47□□□□□ -1.21
HTT-206ENST00000509618 RGL3Q3MIN7 710 aa7.47□□□□□ -1.21
HTT-206ENST00000509618 PELP1Q8IZL8 1130 aaKnown RBP7.47□□□□□ -1.21
HTT-206ENST00000509618 TCP11L2Q8N4U5 519 aa7.47□□□□□ -1.21
HTT-206ENST00000509618 COL5A2P05997 1499 aaPredicted RBP7.47□□□□□ -1.21
HTT-206ENST00000509618 PLSCR1O15162 318 aa7.46□□□□□ -1.22
HTT-206ENST00000509618 PAK3O75914 559 aaPredicted RBP7.46□□□□□ -1.22
HTT-206ENST00000509618 SLC15A2Q16348 729 aa7.46□□□□□ -1.22
HTT-206ENST00000509618 GPR162Q16538 588 aa7.46□□□□□ -1.22
HTT-206ENST00000509618 TXNRD1Q16881 649 aa7.46□□□□□ -1.22
HTT-206ENST00000509618 CFAP70Q5T0N1 1121 aa7.46□□□□□ -1.22
HTT-206ENST00000509618 COL13A1Q5TAT6 717 aaPredicted RBP7.46□□□□□ -1.22
HTT-206ENST00000509618 MARCH10Q8NA82 808 aaPredicted RBP7.46□□□□□ -1.22
HTT-206ENST00000509618 ARXQ96QS3 562 aa7.46□□□□□ -1.22
HTT-206ENST00000509618 MTFR1LQ9H019 292 aa7.46□□□□□ -1.22
HTT-206ENST00000509618 TULP4Q9NRJ4 1543 aa7.46□□□□□ -1.22
HTT-206ENST00000509618 MINK1Q8N4C8 1332 aaPredicted RBP7.46□□□□□ -1.22
HTT-206ENST00000509618 ADCY9O60503 1353 aa7.46□□□□□ -1.22
HTT-206ENST00000509618 HSPA6P17066 643 aa7.45□□□□□ -1.22
HTT-206ENST00000509618 KCNA4P22459 653 aa7.45□□□□□ -1.22
HTT-206ENST00000509618 KLHL34Q8N239 644 aa7.45□□□□□ -1.22
HTT-206ENST00000509618 ZNF526Q8TF50 670 aaPredicted RBP7.45□□□□□ -1.22
HTT-206ENST00000509618 ADGRB1O14514 1584 aa7.45□□□□□ -1.22
HTT-206ENST00000509618 GPRASP1Q5JY77 1395 aa7.45□□□□□ -1.22
HTT-206ENST00000509618 PPARGC1BQ86YN6 1023 aaKnown RBP7.44□□□□□ -1.22
HTT-206ENST00000509618 STK32BQ9NY57 414 aa7.44□□□□□ -1.22
HTT-206ENST00000509618 DHX57Q6P158 1386 aaKnown RBP7.44□□□□□ -1.22
HTT-206ENST00000509618 HTRA3P83110 453 aa7.43□□□□□ -1.22
HTT-206ENST00000509618 USP19O94966 1318 aa7.43□□□□□ -1.22
HTT-206ENST00000509618 WNK3Q9BYP7 1800 aa7.43□□□□□ -1.22
HTT-206ENST00000509618 EVA1CP58658 441 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms