RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 SVOPQ8N4V2 548 aa3.95□□□□□ -1.78
CAST-226ENST00000509529 MPNDQ8N594 471 aa3.95□□□□□ -1.78
CAST-226ENST00000509529 ZNF511Q8NB15 262 aa3.95□□□□□ -1.78
CAST-226ENST00000509529 ITPKCQ96DU7 683 aa3.95□□□□□ -1.78
CAST-226ENST00000509529 TSHZ2Q9NRE2 1034 aa3.95□□□□□ -1.78
CAST-226ENST00000509529 DNMT3LQ9UJW3 386 aa3.95□□□□□ -1.78
CAST-226ENST00000509529 VARSP26640 1264 aaKnown RBP3.94□□□□□ -1.78
CAST-226ENST00000509529 TESPA1A2RU30 521 aaPredicted RBP3.94□□□□□ -1.78
CAST-226ENST00000509529 ZIC2O95409 532 aaPredicted RBP3.94□□□□□ -1.78
CAST-226ENST00000509529 MS4A1P11836 297 aa3.94□□□□□ -1.78
CAST-226ENST00000509529 RNFT1Q5M7Z0 435 aa3.94□□□□□ -1.78
CAST-226ENST00000509529 WHAMMQ8TF30 809 aa3.94□□□□□ -1.78
CAST-226ENST00000509529 COL25A1Q9BXS0 654 aaPredicted RBP3.94□□□□□ -1.78
CAST-226ENST00000509529 BMP2P12643 396 aa3.93□□□□□ -1.78
CAST-226ENST00000509529 FOXK2Q01167 660 aa3.93□□□□□ -1.78
CAST-226ENST00000509529 P3H3Q8IVL6 736 aa3.93□□□□□ -1.78
CAST-226ENST00000509529 ARHGEF15O94989 841 aa3.93□□□□□ -1.78
CAST-226ENST00000509529 NR3C2P08235 984 aa3.93□□□□□ -1.78
CAST-226ENST00000509529 LINC00528Q8N1L1 170 aa3.93□□□□□ -1.78
CAST-226ENST00000509529 EVA1BQ9NVM1 165 aa3.93□□□□□ -1.78
CAST-226ENST00000509529 TTBK1Q5TCY1 1321 aaPredicted RBP3.93□□□□□ -1.78
CAST-226ENST00000509529 ADAM23O75077 832 aa3.92□□□□□ -1.78
CAST-226ENST00000509529 PTPRNQ16849 979 aa3.92□□□□□ -1.78
CAST-226ENST00000509529 SOS2Q07890 1332 aaPredicted RBP3.92□□□□□ -1.78
CAST-226ENST00000509529 KANK3Q6NY19 840 aa3.92□□□□□ -1.78
CAST-226ENST00000509529 PCDHGC3Q9UN70 934 aa3.92□□□□□ -1.78
CAST-226ENST00000509529 MDM2Q00987 491 aaPredicted RBP3.91□□□□□ -1.78
CAST-226ENST00000509529 MEIOBQ8N635 442 aa3.91□□□□□ -1.78
CAST-226ENST00000509529 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
CAST-226ENST00000509529 C6orf229H3BNL8 230 aa3.91□□□□□ -1.78
CAST-226ENST00000509529 KCNH2Q12809 1159 aa3.91□□□□□ -1.78
CAST-226ENST00000509529 PTSQ03393 145 aa3.91□□□□□ -1.78
CAST-226ENST00000509529 ARID5BQ14865 1188 aa3.91□□□□□ -1.78
CAST-226ENST00000509529 CDK15Q96Q40 435 aa3.91□□□□□ -1.78
CAST-226ENST00000509529 UPP2O95045 317 aa3.9□□□□□ -1.78
CAST-226ENST00000509529 SLURP2P0DP57 97 aa3.9□□□□□ -1.78
CAST-226ENST00000509529 SMYD5Q6GMV2 418 aa3.9□□□□□ -1.78
CAST-226ENST00000509529 FAM174AQ8TBP5 190 aa3.9□□□□□ -1.78
CAST-226ENST00000509529 MARSP56192 900 aaKnown RBP3.9□□□□□ -1.79
CAST-226ENST00000509529 NANOS1Q8WY41 292 aaKnown RBP3.9□□□□□ -1.79
CAST-226ENST00000509529 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.79
CAST-226ENST00000509529 FDX1P10109 184 aa3.89□□□□□ -1.79
CAST-226ENST00000509529 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.89□□□□□ -1.793e-9■■□□□ 14.2
CAST-226ENST00000509529 GPIHBP1Q8IV16 184 aa3.89□□□□□ -1.79
CAST-226ENST00000509529 FOXJ1Q92949 421 aa3.89□□□□□ -1.79
CAST-226ENST00000509529 SCARF2Q96GP6 870 aaPredicted RBP3.89□□□□□ -1.79
CAST-226ENST00000509529 ITGB2P05107 769 aa3.89□□□□□ -1.79
CAST-226ENST00000509529 GRM5P41594 1212 aa3.89□□□□□ -1.79
CAST-226ENST00000509529 NR5A1Q13285 461 aa3.89□□□□□ -1.79
CAST-226ENST00000509529 PLA2G4EQ3MJ16 856 aa3.89□□□□□ -1.79
CAST-226ENST00000509529 SPOCK3Q9BQ16 436 aa3.89□□□□□ -1.79
CAST-226ENST00000509529 MSTNO14793 375 aa3.88□□□□□ -1.79
CAST-226ENST00000509529 PSMG3-AS1Q96PY0 264 aa3.88□□□□□ -1.79
CAST-226ENST00000509529 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
CAST-226ENST00000509529 TTLL8A6PVC2 850 aa3.88□□□□□ -1.79
CAST-226ENST00000509529 NUTM1Q86Y26 1132 aa3.88□□□□□ -1.79
CAST-226ENST00000509529 CCDC155Q8N6L0 562 aa3.88□□□□□ -1.79
CAST-226ENST00000509529 MAP2K5Q13163 448 aa3.87□□□□□ -1.79
CAST-226ENST00000509529 PRR7Q8TB68 274 aa3.87□□□□□ -1.79
CAST-226ENST00000509529 FIGNL2A6NMB9 653 aa3.87□□□□□ -1.79
CAST-226ENST00000509529 C4orf48Q5BLP8 95 aa3.87□□□□□ -1.79
CAST-226ENST00000509529 FAM217BQ9NTX9 383 aaPredicted RBP3.87□□□□□ -1.79
CAST-226ENST00000509529 CDC14CA4D256 554 aa3.86□□□□□ -1.79
CAST-226ENST00000509529 PROCP04070 461 aa3.86□□□□□ -1.79
CAST-226ENST00000509529 LYPD4Q6UWN0 246 aa3.86□□□□□ -1.79
CAST-226ENST00000509529 TSEN34Q9BSV6 310 aaKnown RBP3.86□□□□□ -1.79
CAST-226ENST00000509529 SPTLC1O15269 473 aa3.86□□□□□ -1.79
CAST-226ENST00000509529 VWA5B2Q8N398 1253 aa3.86□□□□□ -1.79
CAST-226ENST00000509529 DCAF5Q96JK2 942 aa3.86□□□□□ -1.79
CAST-226ENST00000509529 ADAMTS2O95450 1211 aa3.86□□□□□ -1.79
CAST-226ENST00000509529 ITGA6P23229 1130 aa3.86□□□□□ -1.79
CAST-226ENST00000509529 CTHP32929 405 aa3.86□□□□□ -1.79
CAST-226ENST00000509529 SLC35F4A4IF30 521 aa3.85□□□□□ -1.79
CAST-226ENST00000509529 IRF6O14896 467 aa3.85□□□□□ -1.79
CAST-226ENST00000509529 FSHRP23945 695 aa3.85□□□□□ -1.79
CAST-226ENST00000509529 DESI1Q6ICB0 168 aa3.85□□□□□ -1.79
CAST-226ENST00000509529 Q8N3U1 123 aa3.85□□□□□ -1.79
CAST-226ENST00000509529 GPCPD1Q9NPB8 672 aa3.85□□□□□ -1.79
CAST-226ENST00000509529 NDUFV2P19404 249 aa3.85□□□□□ -1.79
CAST-226ENST00000509529 MAP10Q9P2G4 905 aa3.85□□□□□ -1.79
CAST-226ENST00000509529 AGERQ15109 404 aa3.84□□□□□ -1.79
CAST-226ENST00000509529 SV2AQ7L0J3 742 aa3.84□□□□□ -1.79
CAST-226ENST00000509529 GALNT6Q8NCL4 622 aa3.84□□□□□ -1.79
CAST-226ENST00000509529 MOXD2PA6NHM9 499 aa3.84□□□□□ -1.8
CAST-226ENST00000509529 CELA2BP08218 269 aaPredicted RBP3.84□□□□□ -1.8
CAST-226ENST00000509529 MAP3K10Q02779 954 aa3.84□□□□□ -1.8
CAST-226ENST00000509529 KRTAP1-3Q8IUG1 177 aa3.84□□□□□ -1.8
CAST-226ENST00000509529 K7ELQ4 463 aaPredicted RBP3.83□□□□□ -1.8
CAST-226ENST00000509529 CLCN1P35523 988 aa3.83□□□□□ -1.8
CAST-226ENST00000509529 MTMR2Q13614 643 aa3.83□□□□□ -1.8
CAST-226ENST00000509529 CNTNAP5Q8WYK1 1306 aa3.83□□□□□ -1.8
CAST-226ENST00000509529 F12P00748 615 aaPredicted RBP3.83□□□□□ -1.8
CAST-226ENST00000509529 LYPD8Q6UX82 237 aa3.83□□□□□ -1.8
CAST-226ENST00000509529 SPIRE2Q8WWL2 714 aa3.83□□□□□ -1.8
CAST-226ENST00000509529 CCDC102AQ96A19 550 aa3.83□□□□□ -1.8
CAST-226ENST00000509529 SPINT1O43278 529 aa3.82□□□□□ -1.8
CAST-226ENST00000509529 SRSF11Q05519 484 aaKnown RBP3.82□□□□□ -1.8
CAST-226ENST00000509529 SH3RF1Q7Z6J0 888 aa3.82□□□□□ -1.8
CAST-226ENST00000509529 CBLBQ13191 982 aa3.82□□□□□ -1.8
CAST-226ENST00000509529 GAS6Q14393 721 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms