RNA–Protein interactions for RNA: ENST00000508836.1

C4orf46-203, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 1 (best)

Gene C4orf46, Length 1,103 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-203ENST00000508836 ARHGEF10O15013 1369 aa16.53■□□□□ 0.24
C4orf46-203ENST00000508836 BTG4Q9NY30 223 aa16.53■□□□□ 0.24
C4orf46-203ENST00000508836 PHF8Q9UPP1 1060 aa16.53■□□□□ 0.24
C4orf46-203ENST00000508836 SBNO1A3KN83 1393 aa16.52■□□□□ 0.24
C4orf46-203ENST00000508836 CAMKK2Q96RR4 588 aa16.52■□□□□ 0.24
C4orf46-203ENST00000508836 KNDC1Q76NI1 1749 aa16.52■□□□□ 0.24
C4orf46-203ENST00000508836 IFT172Q9UG01 1749 aa16.5■□□□□ 0.23
C4orf46-203ENST00000508836 THSD7AQ9UPZ6 1657 aa16.5■□□□□ 0.23
C4orf46-203ENST00000508836 TRIM37O94972 964 aa16.5■□□□□ 0.23
C4orf46-203ENST00000508836 ABCC11Q96J66 1382 aa16.5■□□□□ 0.23
C4orf46-203ENST00000508836 ADGRF5Q8IZF2 1346 aa16.49■□□□□ 0.23
C4orf46-203ENST00000508836 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
C4orf46-203ENST00000508836 PPP1R1BQ9UD71 204 aaPredicted RBP16.49■□□□□ 0.23
C4orf46-203ENST00000508836 NRXN1Q9ULB1 1477 aa16.48■□□□□ 0.23
C4orf46-203ENST00000508836 SPATA31A5Q5VU36 1347 aa16.48■□□□□ 0.23
C4orf46-203ENST00000508836 SPATA31A7Q8IWB4 1347 aa16.48■□□□□ 0.23
C4orf46-203ENST00000508836 TMEM132EQ6IEE7 984 aa16.48■□□□□ 0.23
C4orf46-203ENST00000508836 PARD3Q8TEW0 1356 aa16.48■□□□□ 0.23
C4orf46-203ENST00000508836 RRBP1Q9P2E9 1410 aaKnown RBP16.47■□□□□ 0.23
C4orf46-203ENST00000508836 APBA3O96018 575 aa16.47■□□□□ 0.23
C4orf46-203ENST00000508836 RREB1Q92766 1687 aa16.46■□□□□ 0.23
C4orf46-203ENST00000508836 FAM196AQ6ZSG2 479 aa16.46■□□□□ 0.23
C4orf46-203ENST00000508836 NUP188Q5SRE5 1749 aa16.45■□□□□ 0.22
C4orf46-203ENST00000508836 YTHDC2Q9H6S0 1430 aaKnown RBP16.45■□□□□ 0.22
C4orf46-203ENST00000508836 NINLQ9Y2I6 1382 aa16.44■□□□□ 0.22
C4orf46-203ENST00000508836 NBPF8Q3BBV2 869 aa16.44■□□□□ 0.22
C4orf46-203ENST00000508836 NBPF14Q5TI25 921 aa16.44■□□□□ 0.22
C4orf46-203ENST00000508836 SPON1Q9HCB6 807 aa16.44■□□□□ 0.22
C4orf46-203ENST00000508836 PMFBP1Q8TBY8 1022 aa16.43■□□□□ 0.22
C4orf46-203ENST00000508836 CAMTA1Q9Y6Y1 1673 aa16.43■□□□□ 0.22
C4orf46-203ENST00000508836 TRPM3Q9HCF6 1732 aaPredicted RBP16.42■□□□□ 0.22
C4orf46-203ENST00000508836 KCNQ2O43526 872 aa16.41■□□□□ 0.22
C4orf46-203ENST00000508836 RGL3Q3MIN7 710 aa16.41■□□□□ 0.22
C4orf46-203ENST00000508836 ALS2Q96Q42 1657 aa16.4■□□□□ 0.22
C4orf46-203ENST00000508836 SENP3-EIF4A1A0A087X0R7 540 aa16.4■□□□□ 0.22
C4orf46-203ENST00000508836 SIRT1Q96EB6 747 aa16.4■□□□□ 0.22
C4orf46-203ENST00000508836 PRDM11Q9NQV5 511 aa16.4■□□□□ 0.22
C4orf46-203ENST00000508836 SPATA31A1Q5TZJ5 1347 aa16.4■□□□□ 0.22
C4orf46-203ENST00000508836 ANKRD30BQ9BXX2 1392 aa16.39■□□□□ 0.21
C4orf46-203ENST00000508836 PIK3C2GO75747 1445 aa16.39■□□□□ 0.21
C4orf46-203ENST00000508836 SAFB2Q14151 953 aaKnown RBP eCLIP16.39■□□□□ 0.21
C4orf46-203ENST00000508836 ZNF784Q8NCA9 323 aaPredicted RBP16.38■□□□□ 0.21
C4orf46-203ENST00000508836 GPRASP1Q5JY77 1395 aa16.38■□□□□ 0.21
C4orf46-203ENST00000508836 ANKARQ7Z5J8 1434 aa16.37■□□□□ 0.21
C4orf46-203ENST00000508836 CRYBG1Q9Y4K1 1723 aa16.37■□□□□ 0.21
C4orf46-203ENST00000508836 PDE3BQ13370 1112 aa16.36■□□□□ 0.21
C4orf46-203ENST00000508836 IFFO2Q5TF58 517 aa16.36■□□□□ 0.21
C4orf46-203ENST00000508836 STRN4Q9NRL3 753 aa16.36■□□□□ 0.21
C4orf46-203ENST00000508836 SPATA31E1Q6ZUB1 1445 aa16.36■□□□□ 0.21
C4orf46-203ENST00000508836 PRAM1Q96QH2 718 aa16.35■□□□□ 0.21
C4orf46-203ENST00000508836 USP35Q9P2H5 1018 aa16.35■□□□□ 0.21
C4orf46-203ENST00000508836 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
C4orf46-203ENST00000508836 CHRNA2Q15822 529 aa16.33■□□□□ 0.2
C4orf46-203ENST00000508836 KIAA0232Q92628 1395 aa16.33■□□□□ 0.2
C4orf46-203ENST00000508836 PAK3O75914 559 aaPredicted RBP16.32■□□□□ 0.2
C4orf46-203ENST00000508836 DHX57Q6P158 1386 aaKnown RBP16.32■□□□□ 0.2
C4orf46-203ENST00000508836 NRKQ7Z2Y5 1582 aa16.32■□□□□ 0.2
C4orf46-203ENST00000508836 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
C4orf46-203ENST00000508836 C14orf93Q9H972 538 aaKnown RBP16.31■□□□□ 0.2
C4orf46-203ENST00000508836 POGKQ9P215 609 aa16.31■□□□□ 0.2
C4orf46-203ENST00000508836 CHD4Q14839 1912 aa16.31■□□□□ 0.2
C4orf46-203ENST00000508836 C1QTNF8P60827 252 aa16.3■□□□□ 0.2
C4orf46-203ENST00000508836 BARGINQ6ZT62 677 aa16.3■□□□□ 0.2
C4orf46-203ENST00000508836 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
C4orf46-203ENST00000508836 CASZ1Q86V15 1759 aa16.28■□□□□ 0.2
C4orf46-203ENST00000508836 PRR36Q9H6K5 1346 aa16.28■□□□□ 0.2
C4orf46-203ENST00000508836 EVA1CP58658 441 aa16.28■□□□□ 0.2
C4orf46-203ENST00000508836 NGDNQ8NEJ9 315 aaKnown RBP16.28■□□□□ 0.2
C4orf46-203ENST00000508836 HIRIP3Q9BW71 556 aaPredicted RBP16.28■□□□□ 0.2
C4orf46-203ENST00000508836 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
C4orf46-203ENST00000508836 MYOM1P52179 1685 aa16.27■□□□□ 0.2
C4orf46-203ENST00000508836 EIF3AQ14152 1382 aaKnown RBP16.27■□□□□ 0.2
C4orf46-203ENST00000508836 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.2
C4orf46-203ENST00000508836 ZC3H6P61129 1189 aaKnown RBP16.27■□□□□ 0.2
C4orf46-203ENST00000508836 DLC1Q96QB1 1528 aa16.27■□□□□ 0.2
C4orf46-203ENST00000508836 TCP11L2Q8N4U5 519 aa16.26■□□□□ 0.19
C4orf46-203ENST00000508836 ANO8Q9HCE9 1232 aaPredicted RBP16.26■□□□□ 0.19
C4orf46-203ENST00000508836 TULP4Q9NRJ4 1543 aa16.25■□□□□ 0.19
C4orf46-203ENST00000508836 ZBTB7AO95365 584 aa16.25■□□□□ 0.19
C4orf46-203ENST00000508836 RGPD3A6NKT7 1758 aaPredicted RBP16.25■□□□□ 0.19
C4orf46-203ENST00000508836 RGPD4Q7Z3J3 1758 aa16.25■□□□□ 0.19
C4orf46-203ENST00000508836 MINK1Q8N4C8 1332 aaPredicted RBP16.24■□□□□ 0.19
C4orf46-203ENST00000508836 LARP1Q6PKG0 1096 aaKnown RBP16.24■□□□□ 0.19
C4orf46-203ENST00000508836 PDGFDQ9GZP0 370 aaPredicted RBP16.24■□□□□ 0.19
C4orf46-203ENST00000508836 PARP4Q9UKK3 1724 aaKnown RBP16.22■□□□□ 0.19
C4orf46-203ENST00000508836 SBF2Q86WG5 1849 aa16.22■□□□□ 0.19
C4orf46-203ENST00000508836 C11orf95C9JLR9 678 aaPredicted RBP16.22■□□□□ 0.19
C4orf46-203ENST00000508836 PTGER2P43116 358 aa16.22■□□□□ 0.19
C4orf46-203ENST00000508836 NUTM2GQ5VZR2 741 aa16.22■□□□□ 0.19
C4orf46-203ENST00000508836 SYT17Q9BSW7 474 aa16.22■□□□□ 0.19
C4orf46-203ENST00000508836 FHDC1Q9C0D6 1143 aaPredicted RBP16.22■□□□□ 0.19
C4orf46-203ENST00000508836 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
C4orf46-203ENST00000508836 PLSCR1O15162 318 aa16.21■□□□□ 0.19
C4orf46-203ENST00000508836 BCL11BQ9C0K0 894 aaPredicted RBP16.21■□□□□ 0.19
C4orf46-203ENST00000508836 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
C4orf46-203ENST00000508836 OVOS2A0A0J9YW53 1432 aa16.2■□□□□ 0.18
C4orf46-203ENST00000508836 OVOS2Q6IE36 1432 aa16.2■□□□□ 0.18
C4orf46-203ENST00000508836 WASLO00401 505 aaPredicted RBP16.2■□□□□ 0.18
C4orf46-203ENST00000508836 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
C4orf46-203ENST00000508836 THRAP3Q9Y2W1 955 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms