RNA–Protein interactions for RNA: ENST00000508689.1

MATR3-213, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-213ENST00000508689 EVC2Q86UK5 1308 aa23.24■■□□□ 1.31
MATR3-213ENST00000508689 ARHGEF10O15013 1369 aa23.24■■□□□ 1.31
MATR3-213ENST00000508689 CCER1Q8TC90 406 aaPredicted RBP23.23■■□□□ 1.31
MATR3-213ENST00000508689 PHRF1Q9P1Y6 1649 aaKnown RBP23.22■■□□□ 1.31
MATR3-213ENST00000508689 RGS12O14924 1447 aa23.21■■□□□ 1.31
MATR3-213ENST00000508689 ATRNO75882 1429 aa23.21■■□□□ 1.31
MATR3-213ENST00000508689 SLIT2O94813 1529 aa23.21■■□□□ 1.31
MATR3-213ENST00000508689 ST20-MTHFSA0A0A6YYL1 179 aa23.2■■□□□ 1.3
MATR3-213ENST00000508689 FAM83GA6ND36 823 aa23.2■■□□□ 1.3
MATR3-213ENST00000508689 RXRBP28702 533 aa23.2■■□□□ 1.3
MATR3-213ENST00000508689 TESK2Q96S53 571 aa23.2■■□□□ 1.3
MATR3-213ENST00000508689 AKAP12Q02952 1782 aa23.19■■□□□ 1.3
MATR3-213ENST00000508689 HAP1P54257 671 aaPredicted RBP23.19■■□□□ 1.3
MATR3-213ENST00000508689 SBNO2Q9Y2G9 1366 aa23.18■■□□□ 1.3
MATR3-213ENST00000508689 USP6P35125 1406 aa23.17■■□□□ 1.3
MATR3-213ENST00000508689 SSH2Q76I76 1423 aa23.16■■□□□ 1.3
MATR3-213ENST00000508689 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.16■■□□□ 1.3
MATR3-213ENST00000508689 PIK3C2AO00443 1686 aa23.16■■□□□ 1.3
MATR3-213ENST00000508689 CLSPNQ9HAW4 1339 aa23.16■■□□□ 1.3
MATR3-213ENST00000508689 GLI3P10071 1580 aa23.16■■□□□ 1.3
MATR3-213ENST00000508689 CD163L1Q9NR16 1453 aa23.16■■□□□ 1.3
MATR3-213ENST00000508689 NRAPQ86VF7 1730 aa23.16■■□□□ 1.3
MATR3-213ENST00000508689 USP47Q96K76 1375 aa23.14■■□□□ 1.3
MATR3-213ENST00000508689 NRKQ7Z2Y5 1582 aa23.14■■□□□ 1.3
MATR3-213ENST00000508689 CHRNA2Q15822 529 aa23.14■■□□□ 1.29
MATR3-213ENST00000508689 RBM6P78332 1123 aaKnown RBP23.13■■□□□ 1.29
MATR3-213ENST00000508689 TRPC5Q9UL62 973 aaPredicted RBP23.13■■□□□ 1.29
MATR3-213ENST00000508689 ZC3H6P61129 1189 aaKnown RBP23.12■■□□□ 1.29
MATR3-213ENST00000508689 UNC5CLQ8IV45 518 aa23.12■■□□□ 1.29
MATR3-213ENST00000508689 ABTB2Q8N961 1025 aa23.12■■□□□ 1.29
MATR3-213ENST00000508689 SLC12A5Q9H2X9 1139 aa23.12■■□□□ 1.29
MATR3-213ENST00000508689 NWD2Q9ULI1 1742 aa23.12■■□□□ 1.29
MATR3-213ENST00000508689 MON2Q7Z3U7 1717 aa23.11■■□□□ 1.29
MATR3-213ENST00000508689 CPSF1Q10570 1443 aaKnown RBP23.11■■□□□ 1.29
MATR3-213ENST00000508689 ZRANB1Q9UGI0 708 aa23.11■■□□□ 1.29
MATR3-213ENST00000508689 KIAA0232Q92628 1395 aa23.11■■□□□ 1.29
MATR3-213ENST00000508689 COL14A1Q05707 1796 aaKnown RBP23.1■■□□□ 1.29
MATR3-213ENST00000508689 ATAD2Q6PL18 1390 aa23.1■■□□□ 1.29
MATR3-213ENST00000508689 CDK12Q9NYV4 1490 aaPredicted RBP23.1■■□□□ 1.29
MATR3-213ENST00000508689 USP19O94966 1318 aa23.09■■□□□ 1.29
MATR3-213ENST00000508689 BTG4Q9NY30 223 aa23.08■■□□□ 1.29
MATR3-213ENST00000508689 TMC1Q8TDI8 760 aa23.07■■□□□ 1.28
MATR3-213ENST00000508689 GJD4Q96KN9 370 aaPredicted RBP23.07■■□□□ 1.28
MATR3-213ENST00000508689 TTC21BQ7Z4L5 1316 aa23.07■■□□□ 1.28
MATR3-213ENST00000508689 BRWD3Q6RI45 1802 aa23.06■■□□□ 1.28
MATR3-213ENST00000508689 EP400Q96L91 3159 aa23.05■■□□□ 1.28
MATR3-213ENST00000508689 KTN1Q86UP2 1357 aaKnown RBP23.05■■□□□ 1.28
MATR3-213ENST00000508689 PRDM11Q9NQV5 511 aa23.05■■□□□ 1.28
MATR3-213ENST00000508689 TIMELESSQ9UNS1 1208 aa23.04■■□□□ 1.28
MATR3-213ENST00000508689 LMO7Q8WWI1 1683 aa23.03■■□□□ 1.28
MATR3-213ENST00000508689 CAMTA1Q9Y6Y1 1673 aa23.03■■□□□ 1.28
MATR3-213ENST00000508689 SLIT3O75094 1523 aa23.03■■□□□ 1.28
MATR3-213ENST00000508689 NLRP6P59044 892 aa23.03■■□□□ 1.28
MATR3-213ENST00000508689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.03■■□□□ 1.283e-7■■■□□ 15.4
MATR3-213ENST00000508689 A0A1W2PP64 1363 aa23.02■■□□□ 1.28
MATR3-213ENST00000508689 GCP02774 474 aa23.02■■□□□ 1.28
MATR3-213ENST00000508689 VPS72Q15906 364 aa23.02■■□□□ 1.28
MATR3-213ENST00000508689 SOX12O15370 315 aa23.01■■□□□ 1.27
MATR3-213ENST00000508689 NME9Q86XW9 330 aa23.01■■□□□ 1.27
MATR3-213ENST00000508689 NLRP13Q86W25 1043 aa23■■□□□ 1.27
MATR3-213ENST00000508689 UPF1Q92900 1129 aaKnown RBP eCLIP23■■□□□ 1.27
MATR3-213ENST00000508689 CCDC9Q9Y3X0 531 aaKnown RBP23■■□□□ 1.27
MATR3-213ENST00000508689 ZBTB7CA1YPR0 619 aa22.99■■□□□ 1.27
MATR3-213ENST00000508689 COL18A1P39060 1754 aa22.99■■□□□ 1.27
MATR3-213ENST00000508689 MYOM1P52179 1685 aa22.98■■□□□ 1.27
MATR3-213ENST00000508689 STRN4Q9NRL3 753 aa22.98■■□□□ 1.27
MATR3-213ENST00000508689 RGPD5Q99666 1765 aa22.98■■□□□ 1.27
MATR3-213ENST00000508689 BRD4O60885 1362 aaPredicted RBP22.98■■□□□ 1.27
MATR3-213ENST00000508689 ZNF692Q9BU19 519 aaPredicted RBP22.97■■□□□ 1.27
MATR3-213ENST00000508689 CPDO75976 1380 aa22.96■■□□□ 1.27
MATR3-213ENST00000508689 NFAT5O94916 1531 aa22.96■■□□□ 1.27
MATR3-213ENST00000508689 FAM98CQ17RN3 349 aaKnown RBP22.95■■□□□ 1.26
MATR3-213ENST00000508689 SPATA31A5Q5VU36 1347 aa22.94■■□□□ 1.26
MATR3-213ENST00000508689 SPATA31A7Q8IWB4 1347 aa22.94■■□□□ 1.26
MATR3-213ENST00000508689 HSPA5P11021 654 aaKnown RBP22.94■■□□□ 1.26
MATR3-213ENST00000508689 ADRA2BP18089 450 aa22.94■■□□□ 1.26
MATR3-213ENST00000508689 SEPT12Q8IYM1 358 aa22.94■■□□□ 1.26
MATR3-213ENST00000508689 TTC21AQ8NDW8 1320 aa22.93■■□□□ 1.26
MATR3-213ENST00000508689 LARP1Q6PKG0 1096 aaKnown RBP22.93■■□□□ 1.26
MATR3-213ENST00000508689 PUS7Q96PZ0 661 aaKnown RBP22.93■■□□□ 1.26
MATR3-213ENST00000508689 AXIN2Q9Y2T1 843 aa22.93■■□□□ 1.26
MATR3-213ENST00000508689 USP54Q70EL1 1684 aa22.93■■□□□ 1.26
MATR3-213ENST00000508689 EDC4Q6P2E9 1401 aaKnown RBP22.92■■□□□ 1.26
MATR3-213ENST00000508689 TMF1P82094 1093 aa22.92■■□□□ 1.26
MATR3-213ENST00000508689 FBLN1P23142 703 aa22.91■■□□□ 1.26
MATR3-213ENST00000508689 HDGFL2Q7Z4V5 671 aaPredicted RBP22.91■■□□□ 1.26
MATR3-213ENST00000508689 COL5A2P05997 1499 aaPredicted RBP22.91■■□□□ 1.26
MATR3-213ENST00000508689 USP35Q9P2H5 1018 aa22.9■■□□□ 1.26
MATR3-213ENST00000508689 THSD7AQ9UPZ6 1657 aa22.9■■□□□ 1.26
MATR3-213ENST00000508689 SPATA31A1Q5TZJ5 1347 aa22.89■■□□□ 1.26
MATR3-213ENST00000508689 FAM182BQ5T319 152 aa22.89■■□□□ 1.25
MATR3-213ENST00000508689 USP31Q70CQ4 1352 aa22.89■■□□□ 1.25
MATR3-213ENST00000508689 C11orf95C9JLR9 678 aaPredicted RBP22.88■■□□□ 1.25
MATR3-213ENST00000508689 ONECUT3O60422 494 aaPredicted RBP22.88■■□□□ 1.25
MATR3-213ENST00000508689 ARHGEF25Q86VW2 580 aa22.88■■□□□ 1.25
MATR3-213ENST00000508689 TERF2IPQ9NYB0 399 aa22.88■■□□□ 1.25
MATR3-213ENST00000508689 OVOS2A0A0J9YW53 1432 aa22.88■■□□□ 1.25
MATR3-213ENST00000508689 OVOS2Q6IE36 1432 aa22.88■■□□□ 1.25
MATR3-213ENST00000508689 LTN1O94822 1766 aa22.87■■□□□ 1.25
MATR3-213ENST00000508689 ANKRD36BQ8N2N9 1353 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms