RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
PROM1-207ENST00000508167 C1orf167Q5SNV9 1468 aa14.81□□□□□ -0.04
PROM1-207ENST00000508167 NME9Q86XW9 330 aa14.8□□□□□ -0.04
PROM1-207ENST00000508167 CARD14Q9BXL6 1004 aa14.8□□□□□ -0.04
PROM1-207ENST00000508167 ATP7BP35670 1465 aa14.79□□□□□ -0.04
PROM1-207ENST00000508167 DCCP43146 1447 aa14.78□□□□□ -0.04
PROM1-207ENST00000508167 SHPRHQ149N8 1683 aa14.78□□□□□ -0.04
PROM1-207ENST00000508167 BRD4O60885 1362 aaPredicted RBP14.78□□□□□ -0.04
PROM1-207ENST00000508167 TTC21BQ7Z4L5 1316 aa14.78□□□□□ -0.04
PROM1-207ENST00000508167 BLMP54132 1417 aaPredicted RBP14.78□□□□□ -0.04
PROM1-207ENST00000508167 STRCP1A6NGW2 1772 aa14.77□□□□□ -0.04
PROM1-207ENST00000508167 MST1RQ04912 1400 aa14.77□□□□□ -0.05
PROM1-207ENST00000508167 NLRP13Q86W25 1043 aa14.77□□□□□ -0.05
PROM1-207ENST00000508167 CDC42BPGQ6DT37 1551 aa14.77□□□□□ -0.05
PROM1-207ENST00000508167 HNRNPUQ00839 825 aaKnown RBP eCLIP14.76□□□□□ -0.05
PROM1-207ENST00000508167 MRS2Q9HD23 443 aa14.76□□□□□ -0.05
PROM1-207ENST00000508167 NALCNQ8IZF0 1738 aa14.76□□□□□ -0.05
PROM1-207ENST00000508167 ZRANB1Q9UGI0 708 aa14.76□□□□□ -0.05
PROM1-207ENST00000508167 SMG6Q86US8 1419 aaKnown RBP14.75□□□□□ -0.05
PROM1-207ENST00000508167 FYB1O15117 783 aa14.75□□□□□ -0.05
PROM1-207ENST00000508167 MYBBP1AQ9BQG0 1328 aaKnown RBP14.74□□□□□ -0.05
PROM1-207ENST00000508167 INSRP06213 1382 aa14.74□□□□□ -0.05
PROM1-207ENST00000508167 RNF123Q5XPI4 1314 aa14.74□□□□□ -0.05
PROM1-207ENST00000508167 RALBP1Q15311 655 aa14.74□□□□□ -0.05
PROM1-207ENST00000508167 LTBP4Q8N2S1 1624 aa14.73□□□□□ -0.05
PROM1-207ENST00000508167 TTC21AQ8NDW8 1320 aa14.73□□□□□ -0.05
PROM1-207ENST00000508167 NUTM2BA6NNL0 878 aaPredicted RBP14.73□□□□□ -0.05
PROM1-207ENST00000508167 NUTM2EB1AL46 878 aaPredicted RBP14.73□□□□□ -0.05
PROM1-207ENST00000508167 NUTM2AQ8IVF1 878 aaPredicted RBP14.73□□□□□ -0.05
PROM1-207ENST00000508167 LRRC59Q96AG4 307 aaKnown RBP14.73□□□□□ -0.05
PROM1-207ENST00000508167 ADGRB2O60241 1585 aa14.73□□□□□ -0.05
PROM1-207ENST00000508167 USP6P35125 1406 aa14.72□□□□□ -0.05
PROM1-207ENST00000508167 EDC4Q6P2E9 1401 aaKnown RBP14.72□□□□□ -0.05
PROM1-207ENST00000508167 CABLES1Q8TDN4 633 aa14.72□□□□□ -0.05
PROM1-207ENST00000508167 AMPHP49418 695 aa14.72□□□□□ -0.05
PROM1-207ENST00000508167 AMER1Q5JTC6 1135 aaPredicted RBP14.72□□□□□ -0.05
PROM1-207ENST00000508167 CFAP53Q96M91 514 aa14.71□□□□□ -0.05
PROM1-207ENST00000508167 FBLN1P23142 703 aa14.7□□□□□ -0.06
PROM1-207ENST00000508167 ZC3H6P61129 1189 aaKnown RBP14.7□□□□□ -0.06
PROM1-207ENST00000508167 NPC1L1Q9UHC9 1359 aa14.7□□□□□ -0.06
PROM1-207ENST00000508167 FAM9BQ8IZU0 186 aa14.7□□□□□ -0.06
PROM1-207ENST00000508167 POLR3AO14802 1390 aaPredicted RBP14.7□□□□□ -0.06
PROM1-207ENST00000508167 FMN2Q9NZ56 1722 aa14.69□□□□□ -0.06
PROM1-207ENST00000508167 RRS1Q15050 365 aaKnown RBP14.69□□□□□ -0.06
PROM1-207ENST00000508167 LTV1Q96GA3 475 aaPredicted RBP14.68□□□□□ -0.06
PROM1-207ENST00000508167 CPSF1Q10570 1443 aaKnown RBP14.68□□□□□ -0.06
PROM1-207ENST00000508167 FKBP8Q14318 412 aa14.68□□□□□ -0.06
PROM1-207ENST00000508167 ANKRD26Q9UPS8 1709 aa14.68□□□□□ -0.06
PROM1-207ENST00000508167 ADAMTS2O95450 1211 aa14.67□□□□□ -0.06
PROM1-207ENST00000508167 MTHFSP49914 203 aa14.67□□□□□ -0.06
PROM1-207ENST00000508167 KCNH5Q8NCM2 988 aa14.67□□□□□ -0.06
PROM1-207ENST00000508167 RGPD8O14715 1765 aaPredicted RBP14.66□□□□□ -0.06
PROM1-207ENST00000508167 PRDM11Q9NQV5 511 aa14.66□□□□□ -0.06
PROM1-207ENST00000508167 NSD2O96028 1365 aa14.66□□□□□ -0.06
PROM1-207ENST00000508167 U2SURPO15042 1029 aaKnown RBP14.66□□□□□ -0.06
PROM1-207ENST00000508167 WDR43Q15061 677 aaKnown RBP eCLIP14.66□□□□□ -0.06
PROM1-207ENST00000508167 MEX3CQ5U5Q3 659 aaKnown RBP14.66□□□□□ -0.06
PROM1-207ENST00000508167 SPATA31A3Q5VYP0 1347 aa14.66□□□□□ -0.06
PROM1-207ENST00000508167 CSB-PGBD3P0DP91 1061 aa14.65□□□□□ -0.06
PROM1-207ENST00000508167 PPP2R1AP30153 589 aa14.65□□□□□ -0.06
PROM1-207ENST00000508167 ARHGEF10O15013 1369 aa14.65□□□□□ -0.06
PROM1-207ENST00000508167 GCP02774 474 aa14.65□□□□□ -0.06
PROM1-207ENST00000508167 ITSN1Q15811 1721 aa14.65□□□□□ -0.06
PROM1-207ENST00000508167 HSPA1LP34931 641 aa14.64□□□□□ -0.07
PROM1-207ENST00000508167 CD163L1Q9NR16 1453 aa14.64□□□□□ -0.07
PROM1-207ENST00000508167 SOS2Q07890 1332 aaPredicted RBP14.64□□□□□ -0.07
PROM1-207ENST00000508167 EMILIN1Q9Y6C2 1016 aa14.63□□□□□ -0.07
PROM1-207ENST00000508167 NUDCQ9Y266 331 aa14.63□□□□□ -0.07
PROM1-207ENST00000508167 CHRNA2Q15822 529 aa14.63□□□□□ -0.07
PROM1-207ENST00000508167 EVA1CP58658 441 aa14.62□□□□□ -0.07
PROM1-207ENST00000508167 SBNO1A3KN83 1393 aa14.62□□□□□ -0.07
PROM1-207ENST00000508167 TNS3Q68CZ2 1445 aa14.61□□□□□ -0.07
PROM1-207ENST00000508167 XIRP1Q702N8 1843 aaKnown RBP14.61□□□□□ -0.07
PROM1-207ENST00000508167 NEFMP07197 916 aa14.61□□□□□ -0.07
PROM1-207ENST00000508167 TSHZ2Q9NRE2 1034 aa14.61□□□□□ -0.07
PROM1-207ENST00000508167 CCDC9Q9Y3X0 531 aaKnown RBP14.61□□□□□ -0.07
PROM1-207ENST00000508167 U2AF1L5P0DN76 240 aaPredicted RBP14.59□□□□□ -0.07
PROM1-207ENST00000508167 U2AF1Q01081 240 aaKnown RBP eCLIP14.59□□□□□ -0.07
PROM1-207ENST00000508167 STRN4Q9NRL3 753 aa14.59□□□□□ -0.07
PROM1-207ENST00000508167 KIF1AQ12756 1690 aa14.59□□□□□ -0.07
PROM1-207ENST00000508167 POLKQ9UBT6 870 aa14.58□□□□□ -0.07
PROM1-207ENST00000508167 MAP3K19Q56UN5 1328 aa14.58□□□□□ -0.08
PROM1-207ENST00000508167 DIAPH1O60610 1272 aaKnown RBP14.58□□□□□ -0.08
PROM1-207ENST00000508167 IQSEC2Q5JU85 1478 aa14.58□□□□□ -0.08
PROM1-207ENST00000508167 SENP3-EIF4A1A0A087X0R7 540 aa14.58□□□□□ -0.08
PROM1-207ENST00000508167 NGLY1Q96IV0 654 aa14.58□□□□□ -0.08
PROM1-207ENST00000508167 ROBO1Q9Y6N7 1651 aa14.58□□□□□ -0.08
PROM1-207ENST00000508167 ZNF521Q96K83 1311 aa14.57□□□□□ -0.08
PROM1-207ENST00000508167 KIF20BQ96Q89 1820 aa14.57□□□□□ -0.08
PROM1-207ENST00000508167 HSP90AB2PQ58FF8 381 aa14.57□□□□□ -0.08
PROM1-207ENST00000508167 C8orf37Q96NL8 207 aa14.56□□□□□ -0.08
PROM1-207ENST00000508167 NLRP2Q9NX02 1062 aa14.56□□□□□ -0.08
PROM1-207ENST00000508167 USP35Q9P2H5 1018 aa14.56□□□□□ -0.08
PROM1-207ENST00000508167 A0A0G2JS52 829 aa14.55□□□□□ -0.08
PROM1-207ENST00000508167 MYT1Q01538 1121 aa14.55□□□□□ -0.08
PROM1-207ENST00000508167 FBXO41Q8TF61 875 aa14.55□□□□□ -0.08
PROM1-207ENST00000508167 TOPAZ1Q8N9V7 1692 aa14.55□□□□□ -0.08
PROM1-207ENST00000508167 SALL2Q9Y467 1007 aaPredicted RBP14.55□□□□□ -0.08
PROM1-207ENST00000508167 JCADQ9P266 1359 aa14.55□□□□□ -0.08
PROM1-207ENST00000508167 USP31Q70CQ4 1352 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms