RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 QRICH2Q9H0J4 1663 aa20.83■□□□□ 0.93
NEDD4-207ENST00000508075 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
NEDD4-207ENST00000508075 ATAD2Q6PL18 1390 aa20.81■□□□□ 0.92
NEDD4-207ENST00000508075 NRAPQ86VF7 1730 aa20.81■□□□□ 0.92
NEDD4-207ENST00000508075 NWD2Q9ULI1 1742 aa20.81■□□□□ 0.92
NEDD4-207ENST00000508075 TRPM1Q7Z4N2 1603 aa20.8■□□□□ 0.92
NEDD4-207ENST00000508075 SRPK2P78362 688 aaKnown RBP20.79■□□□□ 0.92
NEDD4-207ENST00000508075 ACEP12821 1306 aa20.78■□□□□ 0.92
NEDD4-207ENST00000508075 CENPJQ9HC77 1338 aaPredicted RBP20.78■□□□□ 0.92
NEDD4-207ENST00000508075 BTG4Q9NY30 223 aa20.78■□□□□ 0.92
NEDD4-207ENST00000508075 PHRF1Q9P1Y6 1649 aaKnown RBP20.78■□□□□ 0.92
NEDD4-207ENST00000508075 CHRNA2Q15822 529 aa20.77■□□□□ 0.92
NEDD4-207ENST00000508075 VPS72Q15906 364 aa20.76■□□□□ 0.91
NEDD4-207ENST00000508075 SEPT12Q8IYM1 358 aa20.76■□□□□ 0.91
NEDD4-207ENST00000508075 COL14A1Q05707 1796 aaKnown RBP20.76■□□□□ 0.91
NEDD4-207ENST00000508075 A0A0G2JS52 829 aa20.75■□□□□ 0.91
NEDD4-207ENST00000508075 ZC3H6P61129 1189 aaKnown RBP20.75■□□□□ 0.91
NEDD4-207ENST00000508075 MYT1Q01538 1121 aa20.75■□□□□ 0.91
NEDD4-207ENST00000508075 NBPF8Q3BBV2 869 aa20.75■□□□□ 0.91
NEDD4-207ENST00000508075 PPIP5K1Q6PFW1 1433 aa20.74■□□□□ 0.91
NEDD4-207ENST00000508075 CCDC61Q9Y6R9 512 aa20.74■□□□□ 0.91
NEDD4-207ENST00000508075 FAM98CQ17RN3 349 aaKnown RBP20.73■□□□□ 0.91
NEDD4-207ENST00000508075 PRDM11Q9NQV5 511 aa20.72■□□□□ 0.91
NEDD4-207ENST00000508075 POLR3AO14802 1390 aaPredicted RBP20.72■□□□□ 0.91
NEDD4-207ENST00000508075 KIAA0232Q92628 1395 aa20.72■□□□□ 0.91
NEDD4-207ENST00000508075 FAM182BQ5T319 152 aa20.71■□□□□ 0.91
NEDD4-207ENST00000508075 ROCK2O75116 1388 aaKnown RBP20.71■□□□□ 0.91
NEDD4-207ENST00000508075 PLEKHG3A1L390 1219 aa20.7■□□□□ 0.9
NEDD4-207ENST00000508075 STRN4Q9NRL3 753 aa20.7■□□□□ 0.9
NEDD4-207ENST00000508075 CABP1Q9NZU7 370 aa20.69■□□□□ 0.9
NEDD4-207ENST00000508075 ZBTB7CA1YPR0 619 aa20.68■□□□□ 0.9
NEDD4-207ENST00000508075 ABTB2Q8N961 1025 aa20.68■□□□□ 0.9
NEDD4-207ENST00000508075 NRKQ7Z2Y5 1582 aa20.68■□□□□ 0.9
NEDD4-207ENST00000508075 DEFB132Q7Z7B7 95 aa20.67■□□□□ 0.9
NEDD4-207ENST00000508075 KRT27Q7Z3Y8 459 aa20.65■□□□□ 0.9
NEDD4-207ENST00000508075 EP400Q96L91 3159 aa20.65■□□□□ 0.9
NEDD4-207ENST00000508075 SPATA31A5Q5VU36 1347 aa20.64■□□□□ 0.89
NEDD4-207ENST00000508075 SPATA31A7Q8IWB4 1347 aa20.64■□□□□ 0.89
NEDD4-207ENST00000508075 USP35Q9P2H5 1018 aa20.64■□□□□ 0.89
NEDD4-207ENST00000508075 ONECUT3O60422 494 aaPredicted RBP20.62■□□□□ 0.89
NEDD4-207ENST00000508075 CAMTA1Q9Y6Y1 1673 aa20.61■□□□□ 0.89
NEDD4-207ENST00000508075 EVC2Q86UK5 1308 aa20.61■□□□□ 0.89
NEDD4-207ENST00000508075 USP6P35125 1406 aa20.61■□□□□ 0.89
NEDD4-207ENST00000508075 PIK3C2AO00443 1686 aa20.6■□□□□ 0.89
NEDD4-207ENST00000508075 BLMP54132 1417 aaPredicted RBP20.6■□□□□ 0.89
NEDD4-207ENST00000508075 AKAP12Q02952 1782 aa20.59■□□□□ 0.89
NEDD4-207ENST00000508075 USP19O94966 1318 aa20.59■□□□□ 0.89
NEDD4-207ENST00000508075 THSD7AQ9UPZ6 1657 aa20.59■□□□□ 0.89
NEDD4-207ENST00000508075 SOX12O15370 315 aa20.59■□□□□ 0.89
NEDD4-207ENST00000508075 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
NEDD4-207ENST00000508075 SPATA31A1Q5TZJ5 1347 aa20.58■□□□□ 0.89
NEDD4-207ENST00000508075 LMO7Q8WWI1 1683 aa20.58■□□□□ 0.89
NEDD4-207ENST00000508075 EVA1CP58658 441 aa20.58■□□□□ 0.89
NEDD4-207ENST00000508075 NLRP6P59044 892 aa20.58■□□□□ 0.89
NEDD4-207ENST00000508075 LARP1Q6PKG0 1096 aaKnown RBP20.58■□□□□ 0.89
NEDD4-207ENST00000508075 GCP02774 474 aa20.57■□□□□ 0.88
NEDD4-207ENST00000508075 NLRP13Q86W25 1043 aa20.57■□□□□ 0.88
NEDD4-207ENST00000508075 CARD11Q9BXL7 1154 aa20.57■□□□□ 0.88
NEDD4-207ENST00000508075 SSH2Q76I76 1423 aa20.56■□□□□ 0.88
NEDD4-207ENST00000508075 TRIM26Q12899 539 aaPredicted RBP20.56■□□□□ 0.88
NEDD4-207ENST00000508075 RGPD5Q99666 1765 aa20.55■□□□□ 0.88
NEDD4-207ENST00000508075 CCDC125Q86Z20 511 aa20.55■□□□□ 0.88
NEDD4-207ENST00000508075 ZRANB1Q9UGI0 708 aa20.55■□□□□ 0.88
NEDD4-207ENST00000508075 SF3B2Q13435 895 aaKnown RBP20.54■□□□□ 0.88
NEDD4-207ENST00000508075 TTC21BQ7Z4L5 1316 aa20.52■□□□□ 0.87
NEDD4-207ENST00000508075 CPDO75976 1380 aa20.51■□□□□ 0.87
NEDD4-207ENST00000508075 SLIT3O75094 1523 aa20.51■□□□□ 0.87
NEDD4-207ENST00000508075 COL18A1P39060 1754 aa20.5■□□□□ 0.87
NEDD4-207ENST00000508075 EN1Q05925 392 aaPredicted RBP20.5■□□□□ 0.87
NEDD4-207ENST00000508075 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.5■□□□□ 0.87
NEDD4-207ENST00000508075 MON2Q7Z3U7 1717 aa20.5■□□□□ 0.87
NEDD4-207ENST00000508075 TNS1Q9HBL0 1735 aaKnown RBP20.5■□□□□ 0.87
NEDD4-207ENST00000508075 TMC1Q8TDI8 760 aa20.49■□□□□ 0.87
NEDD4-207ENST00000508075 RGPD1P0DJD0 1748 aa20.49■□□□□ 0.87
NEDD4-207ENST00000508075 COL5A2P05997 1499 aaPredicted RBP20.49■□□□□ 0.87
NEDD4-207ENST00000508075 KTN1Q86UP2 1357 aaKnown RBP20.48■□□□□ 0.87
NEDD4-207ENST00000508075 PSDA5PKW4 1024 aaPredicted RBP20.48■□□□□ 0.87
NEDD4-207ENST00000508075 TRIM37O94972 964 aa20.47■□□□□ 0.87
NEDD4-207ENST00000508075 SLC12A5Q9H2X9 1139 aa20.47■□□□□ 0.87
NEDD4-207ENST00000508075 AXIN2Q9Y2T1 843 aa20.47■□□□□ 0.87
NEDD4-207ENST00000508075 CPSF1Q10570 1443 aaKnown RBP20.46■□□□□ 0.87
NEDD4-207ENST00000508075 CD163L1Q9NR16 1453 aa20.45■□□□□ 0.86
NEDD4-207ENST00000508075 NME9Q86XW9 330 aa20.45■□□□□ 0.86
NEDD4-207ENST00000508075 TCP11L2Q8N4U5 519 aa20.45■□□□□ 0.86
NEDD4-207ENST00000508075 BAG6P46379 1132 aa20.44■□□□□ 0.86
NEDD4-207ENST00000508075 BRD4O60885 1362 aaPredicted RBP20.44■□□□□ 0.86
NEDD4-207ENST00000508075 EZH2Q15910 746 aaKnown RBP20.43■□□□□ 0.86
NEDD4-207ENST00000508075 BARGINQ6ZT62 677 aa20.43■□□□□ 0.86
NEDD4-207ENST00000508075 ZNF692Q9BU19 519 aaPredicted RBP20.43■□□□□ 0.86
NEDD4-207ENST00000508075 ST20-MTHFSA0A0A6YYL1 179 aa20.42■□□□□ 0.86
NEDD4-207ENST00000508075 PDE3BQ13370 1112 aa20.42■□□□□ 0.86
NEDD4-207ENST00000508075 TOM1L2Q6ZVM7 507 aa20.42■□□□□ 0.86
NEDD4-207ENST00000508075 AATKQ6ZMQ8 1374 aa20.42■□□□□ 0.86
NEDD4-207ENST00000508075 SBNO2Q9Y2G9 1366 aa20.41■□□□□ 0.86
NEDD4-207ENST00000508075 CRB1P82279 1406 aa20.41■□□□□ 0.86
NEDD4-207ENST00000508075 NFAT5O94916 1531 aa20.41■□□□□ 0.86
NEDD4-207ENST00000508075 PARP4Q9UKK3 1724 aaKnown RBP20.41■□□□□ 0.86
NEDD4-207ENST00000508075 WNK3Q9BYP7 1800 aa20.41■□□□□ 0.86
NEDD4-207ENST00000508075 ARHGEF25Q86VW2 580 aa20.4■□□□□ 0.86
NEDD4-207ENST00000508075 TTC21AQ8NDW8 1320 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms