RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 LRP5O75197 1615 aa20.42■□□□□ 0.86
TSPAN17-206ENST00000507471 WASLO00401 505 aaPredicted RBP20.4■□□□□ 0.86
TSPAN17-206ENST00000507471 KDM2AQ9Y2K7 1162 aa20.4■□□□□ 0.86
TSPAN17-206ENST00000507471 DCAF11Q8TEB1 546 aa20.39■□□□□ 0.85
TSPAN17-206ENST00000507471 ARHGEF28Q8N1W1 1705 aaKnown RBP20.39■□□□□ 0.85
TSPAN17-206ENST00000507471 BAG6P46379 1132 aa20.38■□□□□ 0.85
TSPAN17-206ENST00000507471 RGPD1P0DJD0 1748 aa20.38■□□□□ 0.85
TSPAN17-206ENST00000507471 THSD7AQ9UPZ6 1657 aa20.38■□□□□ 0.85
TSPAN17-206ENST00000507471 SPATA31A5Q5VU36 1347 aa20.37■□□□□ 0.85
TSPAN17-206ENST00000507471 SPATA31A7Q8IWB4 1347 aa20.37■□□□□ 0.85
TSPAN17-206ENST00000507471 ITSN1Q15811 1721 aa20.37■□□□□ 0.85
TSPAN17-206ENST00000507471 PAK3O75914 559 aaPredicted RBP20.36■□□□□ 0.85
TSPAN17-206ENST00000507471 NGDNQ8NEJ9 315 aaKnown RBP20.36■□□□□ 0.85
TSPAN17-206ENST00000507471 ATP7BP35670 1465 aa20.36■□□□□ 0.85
TSPAN17-206ENST00000507471 FAM182BQ5T319 152 aa20.35■□□□□ 0.85
TSPAN17-206ENST00000507471 PHRF1Q9P1Y6 1649 aaKnown RBP20.35■□□□□ 0.85
TSPAN17-206ENST00000507471 PSDA5PKW4 1024 aaPredicted RBP20.34■□□□□ 0.85
TSPAN17-206ENST00000507471 TNS1Q9HBL0 1735 aaKnown RBP20.33■□□□□ 0.85
TSPAN17-206ENST00000507471 STAC3Q96MF2 364 aa20.33■□□□□ 0.85
TSPAN17-206ENST00000507471 PRDM11Q9NQV5 511 aa20.33■□□□□ 0.85
TSPAN17-206ENST00000507471 EN1Q05925 392 aaPredicted RBP20.32■□□□□ 0.84
TSPAN17-206ENST00000507471 HRCP23327 699 aa20.31■□□□□ 0.84
TSPAN17-206ENST00000507471 KIAA0232Q92628 1395 aa20.31■□□□□ 0.84
TSPAN17-206ENST00000507471 DISP2A7MBM2 1401 aa20.3■□□□□ 0.84
TSPAN17-206ENST00000507471 TOPAZ1Q8N9V7 1692 aa20.3■□□□□ 0.84
TSPAN17-206ENST00000507471 NUDT16Q96DE0 195 aaKnown RBP20.3■□□□□ 0.84
TSPAN17-206ENST00000507471 SPATA31A1Q5TZJ5 1347 aa20.28■□□□□ 0.84
TSPAN17-206ENST00000507471 CHRNA2Q15822 529 aa20.28■□□□□ 0.84
TSPAN17-206ENST00000507471 POLR3AO14802 1390 aaPredicted RBP20.26■□□□□ 0.83
TSPAN17-206ENST00000507471 STRN4Q9NRL3 753 aa20.26■□□□□ 0.83
TSPAN17-206ENST00000507471 ZC3H6P61129 1189 aaKnown RBP20.25■□□□□ 0.83
TSPAN17-206ENST00000507471 NUTM2GQ5VZR2 741 aa20.25■□□□□ 0.83
TSPAN17-206ENST00000507471 CDK19Q9BWU1 502 aa20.25■□□□□ 0.83
TSPAN17-206ENST00000507471 NRKQ7Z2Y5 1582 aa20.25■□□□□ 0.83
TSPAN17-206ENST00000507471 R3HDM1Q15032 1099 aaKnown RBP20.24■□□□□ 0.83
TSPAN17-206ENST00000507471 ACEP12821 1306 aa20.24■□□□□ 0.83
TSPAN17-206ENST00000507471 EZH2Q15910 746 aaKnown RBP20.23■□□□□ 0.83
TSPAN17-206ENST00000507471 KIAA1210Q9ULL0 1709 aa20.23■□□□□ 0.83
TSPAN17-206ENST00000507471 SSH2Q76I76 1423 aa20.21■□□□□ 0.83
TSPAN17-206ENST00000507471 TRIM37O94972 964 aa20.21■□□□□ 0.83
TSPAN17-206ENST00000507471 NBPF8Q3BBV2 869 aa20.21■□□□□ 0.83
TSPAN17-206ENST00000507471 FAM196AQ6ZSG2 479 aa20.21■□□□□ 0.83
TSPAN17-206ENST00000507471 CCDC61Q9Y6R9 512 aa20.21■□□□□ 0.83
TSPAN17-206ENST00000507471 LMO7Q8WWI1 1683 aa20.21■□□□□ 0.83
TSPAN17-206ENST00000507471 CAMTA1Q9Y6Y1 1673 aa20.2■□□□□ 0.82
TSPAN17-206ENST00000507471 CAMKK2Q96RR4 588 aa20.2■□□□□ 0.82
TSPAN17-206ENST00000507471 USP35Q9P2H5 1018 aa20.2■□□□□ 0.82
TSPAN17-206ENST00000507471 PLEKHG3A1L390 1219 aa20.19■□□□□ 0.82
TSPAN17-206ENST00000507471 EVA1CP58658 441 aa20.18■□□□□ 0.82
TSPAN17-206ENST00000507471 BARGINQ6ZT62 677 aa20.18■□□□□ 0.82
TSPAN17-206ENST00000507471 RREB1Q92766 1687 aa20.18■□□□□ 0.82
TSPAN17-206ENST00000507471 CPDO75976 1380 aa20.18■□□□□ 0.82
TSPAN17-206ENST00000507471 APBA3O96018 575 aa20.17■□□□□ 0.82
TSPAN17-206ENST00000507471 ABTB2Q8N961 1025 aa20.17■□□□□ 0.82
TSPAN17-206ENST00000507471 USP19O94966 1318 aa20.17■□□□□ 0.82
TSPAN17-206ENST00000507471 LARP1Q6PKG0 1096 aaKnown RBP20.16■□□□□ 0.82
TSPAN17-206ENST00000507471 PARD3Q8TEW0 1356 aa20.16■□□□□ 0.82
TSPAN17-206ENST00000507471 NUP188Q5SRE5 1749 aa20.15■□□□□ 0.82
TSPAN17-206ENST00000507471 PPIP5K1Q6PFW1 1433 aa20.14■□□□□ 0.81
TSPAN17-206ENST00000507471 PDE3BQ13370 1112 aa20.14■□□□□ 0.81
TSPAN17-206ENST00000507471 NBPF1Q3BBV0 1214 aa20.14■□□□□ 0.81
TSPAN17-206ENST00000507471 TCP11L2Q8N4U5 519 aa20.13■□□□□ 0.81
TSPAN17-206ENST00000507471 PARP4Q9UKK3 1724 aaKnown RBP20.13■□□□□ 0.81
TSPAN17-206ENST00000507471 GCP02774 474 aa20.12■□□□□ 0.81
TSPAN17-206ENST00000507471 NLRP13Q86W25 1043 aa20.12■□□□□ 0.81
TSPAN17-206ENST00000507471 COL5A2P05997 1499 aaPredicted RBP20.11■□□□□ 0.81
TSPAN17-206ENST00000507471 SRPK2P78362 688 aaKnown RBP20.11■□□□□ 0.81
TSPAN17-206ENST00000507471 THRAP3Q9Y2W1 955 aaKnown RBP20.11■□□□□ 0.81
TSPAN17-206ENST00000507471 QRICH2Q9H0J4 1663 aa20.1■□□□□ 0.81
TSPAN17-206ENST00000507471 CENPJQ9HC77 1338 aaPredicted RBP20.09■□□□□ 0.81
TSPAN17-206ENST00000507471 CABP2Q9NPB3 220 aa20.09■□□□□ 0.81
TSPAN17-206ENST00000507471 CRB1P82279 1406 aa20.08■□□□□ 0.8
TSPAN17-206ENST00000507471 BRD4O60885 1362 aaPredicted RBP20.08■□□□□ 0.8
TSPAN17-206ENST00000507471 SLIT3O75094 1523 aa20.07■□□□□ 0.8
TSPAN17-206ENST00000507471 USP6P35125 1406 aa20.07■□□□□ 0.8
TSPAN17-206ENST00000507471 PEAK1Q9H792 1746 aa20.07■□□□□ 0.8
TSPAN17-206ENST00000507471 LRRC37A3O60309 1634 aa20.05■□□□□ 0.8
TSPAN17-206ENST00000507471 NBPF14Q5TI25 921 aa20.05■□□□□ 0.8
TSPAN17-206ENST00000507471 PIK3C2AO00443 1686 aa20.04■□□□□ 0.8
TSPAN17-206ENST00000507471 CABP1Q9NZU7 370 aa20.04■□□□□ 0.8
TSPAN17-206ENST00000507471 AATKQ6ZMQ8 1374 aa20.04■□□□□ 0.8
TSPAN17-206ENST00000507471 OVOS2A0A0G2JMS6 1433 aa20.03■□□□□ 0.8
TSPAN17-206ENST00000507471 OVOS2A0A0J9YW53 1432 aa20.03■□□□□ 0.8
TSPAN17-206ENST00000507471 OVOS2Q6IE36 1432 aa20.03■□□□□ 0.8
TSPAN17-206ENST00000507471 ZBTB7CA1YPR0 619 aa20.03■□□□□ 0.8
TSPAN17-206ENST00000507471 NLRP6P59044 892 aa20.03■□□□□ 0.8
TSPAN17-206ENST00000507471 RGPD3A6NKT7 1758 aaPredicted RBP20.03■□□□□ 0.8
TSPAN17-206ENST00000507471 COL18A1P39060 1754 aa20.03■□□□□ 0.8
TSPAN17-206ENST00000507471 RGPD4Q7Z3J3 1758 aa20.03■□□□□ 0.8
TSPAN17-206ENST00000507471 WNK3Q9BYP7 1800 aa20.02■□□□□ 0.8
TSPAN17-206ENST00000507471 SBF2Q86WG5 1849 aa20.02■□□□□ 0.79
TSPAN17-206ENST00000507471 C11orf95C9JLR9 678 aaPredicted RBP20.01■□□□□ 0.79
TSPAN17-206ENST00000507471 DDB1Q16531 1140 aa19.98■□□□□ 0.79
TSPAN17-206ENST00000507471 TOM1L2Q6ZVM7 507 aa19.98■□□□□ 0.79
TSPAN17-206ENST00000507471 CPSF1Q10570 1443 aaKnown RBP19.98■□□□□ 0.79
TSPAN17-206ENST00000507471 TRPM1Q7Z4N2 1603 aa19.98■□□□□ 0.79
TSPAN17-206ENST00000507471 SPON1Q9HCB6 807 aa19.97■□□□□ 0.79
TSPAN17-206ENST00000507471 AXIN2Q9Y2T1 843 aa19.97■□□□□ 0.79
TSPAN17-206ENST00000507471 WDR17Q8IZU2 1322 aa19.97■□□□□ 0.79
TSPAN17-206ENST00000507471 PLSCR1O15162 318 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms