RNA–Protein interactions for RNA: ENST00000507273.5

RACK1-216, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-216ENST00000507273 CABP2Q9NPB3 220 aa11.99□□□□□ -0.49
RACK1-216ENST00000507273 GLI3P10071 1580 aa11.99□□□□□ -0.49
RACK1-216ENST00000507273 AKAP12Q02952 1782 aa11.98□□□□□ -0.49
RACK1-216ENST00000507273 PPIP5K1Q6PFW1 1433 aa11.98□□□□□ -0.49
RACK1-216ENST00000507273 ACEP12821 1306 aa11.98□□□□□ -0.49
RACK1-216ENST00000507273 LMOD2Q6P5Q4 547 aa11.97□□□□□ -0.49
RACK1-216ENST00000507273 TRPC5Q9UL62 973 aaPredicted RBP11.97□□□□□ -0.49
RACK1-216ENST00000507273 COL14A1Q05707 1796 aaKnown RBP11.97□□□□□ -0.49
RACK1-216ENST00000507273 SBNO2Q9Y2G9 1366 aa11.96□□□□□ -0.49
RACK1-216ENST00000507273 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
RACK1-216ENST00000507273 SRPK2P78362 688 aaKnown RBP11.96□□□□□ -0.49
RACK1-216ENST00000507273 NRKQ7Z2Y5 1582 aa11.96□□□□□ -0.5
RACK1-216ENST00000507273 BRWD3Q6RI45 1802 aa11.95□□□□□ -0.5
RACK1-216ENST00000507273 FAM83GA6ND36 823 aa11.95□□□□□ -0.5
RACK1-216ENST00000507273 UNC5CLQ8IV45 518 aa11.95□□□□□ -0.5
RACK1-216ENST00000507273 PCGF6Q9BYE7 350 aa11.95□□□□□ -0.5
RACK1-216ENST00000507273 SSH2Q76I76 1423 aa11.94□□□□□ -0.5
RACK1-216ENST00000507273 PIK3C2AO00443 1686 aa11.94□□□□□ -0.5
RACK1-216ENST00000507273 EVC2Q86UK5 1308 aa11.94□□□□□ -0.5
RACK1-216ENST00000507273 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
RACK1-216ENST00000507273 CARD11Q9BXL7 1154 aa11.94□□□□□ -0.5
RACK1-216ENST00000507273 CABP1Q9NZU7 370 aa11.94□□□□□ -0.5
RACK1-216ENST00000507273 MON2Q7Z3U7 1717 aa11.94□□□□□ -0.5
RACK1-216ENST00000507273 USP6P35125 1406 aa11.94□□□□□ -0.5
RACK1-216ENST00000507273 GJD4Q96KN9 370 aaPredicted RBP11.93□□□□□ -0.5
RACK1-216ENST00000507273 LMO7Q8WWI1 1683 aa11.92□□□□□ -0.5
RACK1-216ENST00000507273 UPF1Q92900 1129 aaKnown RBP eCLIP11.92□□□□□ -0.5
RACK1-216ENST00000507273 EP400Q96L91 3159 aa11.92□□□□□ -0.5
RACK1-216ENST00000507273 USP19O94966 1318 aa11.91□□□□□ -0.5
RACK1-216ENST00000507273 CD163L1Q9NR16 1453 aa11.91□□□□□ -0.5
RACK1-216ENST00000507273 HAP1P54257 671 aaPredicted RBP11.91□□□□□ -0.5
RACK1-216ENST00000507273 VPS72Q15906 364 aa11.91□□□□□ -0.5
RACK1-216ENST00000507273 NUTM2GQ5VZR2 741 aa11.91□□□□□ -0.5
RACK1-216ENST00000507273 CPSF1Q10570 1443 aaKnown RBP11.91□□□□□ -0.5
RACK1-216ENST00000507273 BRD4O60885 1362 aaPredicted RBP11.91□□□□□ -0.5
RACK1-216ENST00000507273 SLIT3O75094 1523 aa11.91□□□□□ -0.5
RACK1-216ENST00000507273 KIAA0232Q92628 1395 aa11.9□□□□□ -0.5
RACK1-216ENST00000507273 CLSPNQ9HAW4 1339 aa11.89□□□□□ -0.51
RACK1-216ENST00000507273 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
RACK1-216ENST00000507273 TESK2Q96S53 571 aa11.89□□□□□ -0.51
RACK1-216ENST00000507273 BTG4Q9NY30 223 aa11.89□□□□□ -0.51
RACK1-216ENST00000507273 USP54Q70EL1 1684 aa11.89□□□□□ -0.51
RACK1-216ENST00000507273 COL18A1P39060 1754 aa11.89□□□□□ -0.51
RACK1-216ENST00000507273 ATAD2Q6PL18 1390 aa11.89□□□□□ -0.51
RACK1-216ENST00000507273 THSD7AQ9UPZ6 1657 aa11.87□□□□□ -0.51
RACK1-216ENST00000507273 CAMTA1Q9Y6Y1 1673 aa11.87□□□□□ -0.51
RACK1-216ENST00000507273 ST20-MTHFSA0A0A6YYL1 179 aa11.87□□□□□ -0.51
RACK1-216ENST00000507273 ONECUT3O60422 494 aaPredicted RBP11.87□□□□□ -0.51
RACK1-216ENST00000507273 CHRNA2Q15822 529 aa11.87□□□□□ -0.51
RACK1-216ENST00000507273 CPDO75976 1380 aa11.87□□□□□ -0.51
RACK1-216ENST00000507273 ZC3H6P61129 1189 aaKnown RBP11.86□□□□□ -0.51
RACK1-216ENST00000507273 PRDM11Q9NQV5 511 aa11.86□□□□□ -0.51
RACK1-216ENST00000507273 RGPD5Q99666 1765 aa11.86□□□□□ -0.51
RACK1-216ENST00000507273 TTC21BQ7Z4L5 1316 aa11.86□□□□□ -0.51
RACK1-216ENST00000507273 GCP02774 474 aa11.85□□□□□ -0.51
RACK1-216ENST00000507273 NLRP13Q86W25 1043 aa11.85□□□□□ -0.51
RACK1-216ENST00000507273 SPATA31A5Q5VU36 1347 aa11.85□□□□□ -0.51
RACK1-216ENST00000507273 SPATA31A7Q8IWB4 1347 aa11.85□□□□□ -0.51
RACK1-216ENST00000507273 KTN1Q86UP2 1357 aaKnown RBP11.84□□□□□ -0.51
RACK1-216ENST00000507273 USP47Q96K76 1375 aa11.84□□□□□ -0.51
RACK1-216ENST00000507273 SEPT12Q8IYM1 358 aa11.84□□□□□ -0.51
RACK1-216ENST00000507273 PUS7Q96PZ0 661 aaKnown RBP11.84□□□□□ -0.51
RACK1-216ENST00000507273 ZNF692Q9BU19 519 aaPredicted RBP11.84□□□□□ -0.51
RACK1-216ENST00000507273 TIMELESSQ9UNS1 1208 aa11.84□□□□□ -0.51
RACK1-216ENST00000507273 NFAT5O94916 1531 aa11.84□□□□□ -0.51
RACK1-216ENST00000507273 NLRP6P59044 892 aa11.83□□□□□ -0.52
RACK1-216ENST00000507273 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
RACK1-216ENST00000507273 TTC21AQ8NDW8 1320 aa11.83□□□□□ -0.52
RACK1-216ENST00000507273 COL5A2P05997 1499 aaPredicted RBP11.83□□□□□ -0.52
RACK1-216ENST00000507273 A0A1W2PP64 1363 aa11.82□□□□□ -0.52
RACK1-216ENST00000507273 SPATA31A1Q5TZJ5 1347 aa11.82□□□□□ -0.52
RACK1-216ENST00000507273 MYOM1P52179 1685 aa11.81□□□□□ -0.52
RACK1-216ENST00000507273 USP31Q70CQ4 1352 aa11.81□□□□□ -0.52
RACK1-216ENST00000507273 FAM98CQ17RN3 349 aaKnown RBP11.81□□□□□ -0.52
RACK1-216ENST00000507273 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
RACK1-216ENST00000507273 CCDC9Q9Y3X0 531 aaKnown RBP11.81□□□□□ -0.52
RACK1-216ENST00000507273 LTN1O94822 1766 aa11.81□□□□□ -0.52
RACK1-216ENST00000507273 WNK3Q9BYP7 1800 aa11.81□□□□□ -0.52
RACK1-216ENST00000507273 EDC4Q6P2E9 1401 aaKnown RBP11.8□□□□□ -0.52
RACK1-216ENST00000507273 TMC1Q8TDI8 760 aa11.8□□□□□ -0.52
RACK1-216ENST00000507273 AATKQ6ZMQ8 1374 aa11.79□□□□□ -0.52
RACK1-216ENST00000507273 LARP1Q6PKG0 1096 aaKnown RBP11.79□□□□□ -0.52
RACK1-216ENST00000507273 STRN4Q9NRL3 753 aa11.79□□□□□ -0.52
RACK1-216ENST00000507273 PARP4Q9UKK3 1724 aaKnown RBP11.79□□□□□ -0.52
RACK1-216ENST00000507273 NINLQ9Y2I6 1382 aa11.79□□□□□ -0.52
RACK1-216ENST00000507273 OVOS2A0A0J9YW53 1432 aa11.78□□□□□ -0.52
RACK1-216ENST00000507273 OVOS2Q6IE36 1432 aa11.78□□□□□ -0.52
RACK1-216ENST00000507273 ABCC6O95255 1503 aa11.78□□□□□ -0.52
RACK1-216ENST00000507273 KRT27Q7Z3Y8 459 aa11.78□□□□□ -0.52
RACK1-216ENST00000507273 ARHGEF25Q86VW2 580 aa11.78□□□□□ -0.52
RACK1-216ENST00000507273 NME9Q86XW9 330 aa11.78□□□□□ -0.52
RACK1-216ENST00000507273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.78□□□□□ -0.52
RACK1-216ENST00000507273 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
RACK1-216ENST00000507273 TNS1Q9HBL0 1735 aaKnown RBP11.77□□□□□ -0.52
RACK1-216ENST00000507273 CCER1Q8TC90 406 aaPredicted RBP11.77□□□□□ -0.53
RACK1-216ENST00000507273 SLC24A1O60721 1099 aa11.76□□□□□ -0.53
RACK1-216ENST00000507273 BARGINQ6ZT62 677 aa11.76□□□□□ -0.53
RACK1-216ENST00000507273 HDGFL2Q7Z4V5 671 aaPredicted RBP11.76□□□□□ -0.53
RACK1-216ENST00000507273 RGPD1P0DJD0 1748 aa11.76□□□□□ -0.53
RACK1-216ENST00000507273 ANKRD36BQ8N2N9 1353 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 241.9 ms